Protein ROOT PRIMORDIUM DEFECTIVE
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0046621 |
| rosa_laevigata | RLG00000034424 |
| rosa_multiflora | Rmu_sc0003878.1_g000001 |
| rosa_samantha | Rh5BG318900 Rh5DG329500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 274 |
| AccII | CGCG | 1 cut(s) | 346 |
| AciI | CCGC | 1 cut(s) | 344 |
| AcoI | YGGCCR | 2 cut(s) | 197, 209 |
| AcsI | RAATTY | 1 cut(s) | 234 |
| AfaI | GTAC | 1 cut(s) | 333 |
| AgsI | TTSAA | 2 cut(s) | 99, 239 |
| AluBI | AGCT | 1 cut(s) | 257 |
| AluI | AGCT | 1 cut(s) | 257 |
| AoxI | GGCC | 2 cut(s) | 197, 209 |
| ApoI | RAATTY | 1 cut(s) | 234 |
| AseI | ATTAAT | 1 cut(s) | 144 |
| BalI | TGGCCA | 1 cut(s) | 199 |
| BccI | CCATC | 2 cut(s) | 101, 197 |
| BfuAI | ACCTGC | 1 cut(s) | 274 |
| BmsI | GCATC | 2 cut(s) | 171, 349 |
| BpuEI | CTTGAG | 1 cut(s) | 325 |
| Bse1I | ACTGG | 1 cut(s) | 191 |
| BseGI | GGATG | 3 cut(s) | 186, 299, 340 |
| BseNI | ACTGG | 1 cut(s) | 191 |
| BseYI | CCCAGC | 1 cut(s) | 228 |
| Bsh1236I | CGCG | 1 cut(s) | 346 |
| BshFI | GGCC | 2 cut(s) | 199, 211 |
| BsnI | GGCC | 2 cut(s) | 199, 211 |
| BspACI | CCGC | 1 cut(s) | 344 |
| BspANI | GGCC | 2 cut(s) | 199, 211 |
| BspFNI | CGCG | 1 cut(s) | 346 |
| BspMI | ACCTGC | 1 cut(s) | 274 |
| BsrI | ACTGG | 1 cut(s) | 191 |
| BstF5I | GGATG | 3 cut(s) | 186, 299, 340 |
| BstFNI | CGCG | 1 cut(s) | 346 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 275 |
| BstUI | CGCG | 1 cut(s) | 346 |
| BsuRI | GGCC | 2 cut(s) | 199, 211 |
| BtsCI | GGATG | 3 cut(s) | 186, 299, 340 |
| BtsIMutI | CAGTG | 1 cut(s) | 198 |
| BveI | ACCTGC | 1 cut(s) | 274 |
| CseI | GACGC | 1 cut(s) | 234 |
| Csp6I | GTAC | 1 cut(s) | 332 |
| CviJI | RGCY | 4 cut(s) | 156, 199, 211, 257 |
| CviKI_1 | RGCY | 4 cut(s) | 156, 199, 211, 257 |
| CviQI | GTAC | 1 cut(s) | 332 |
| EaeI | YGGCCR | 2 cut(s) | 197, 209 |
| EcoRI | GAATTC | 1 cut(s) | 234 |
| FaiI | YATR | 2 cut(s) | 243, 287 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 309, 341 |
| FokI | GGATG | 3 cut(s) | 193, 286, 327 |
| GsaI | CCCAGC | 1 cut(s) | 232 |
| HaeIII | GGCC | 2 cut(s) | 199, 211 |
| HgaI | GACGC | 1 cut(s) | 234 |
| Hpy188I | TCNGA | 1 cut(s) | 314 |
| Hpy188III | TCNNGA | 1 cut(s) | 149 |
| HpyAV | CCTTC | 1 cut(s) | 146 |
| HpyCH4V | TGCA | 2 cut(s) | 262, 278 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 275 |
| LpnPI | CCDG | 5 cut(s) | 104, 204, 213, 214, 279 |
| LweI | GCATC | 2 cut(s) | 171, 349 |
| MboII | GAAGA | 3 cut(s) | 23, 86, 92 |
| MlsI | TGGCCA | 1 cut(s) | 199 |
| MluCI | AATT | 2 cut(s) | 141, 234 |
| MluNI | TGGCCA | 1 cut(s) | 199 |
| MnlI | CCTC | 3 cut(s) | 171, 215, 300 |
| Mox20I | TGGCCA | 1 cut(s) | 199 |
| MscI | TGGCCA | 1 cut(s) | 199 |
| MseI | TTAA | 3 cut(s) | 119, 144, 272 |
| Msp20I | TGGCCA | 1 cut(s) | 199 |
| MvnI | CGCG | 1 cut(s) | 346 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 275 |
| PshBI | ATTAAT | 1 cut(s) | 144 |
| PspFI | CCCAGC | 1 cut(s) | 228 |
| RsaI | GTAC | 1 cut(s) | 333 |
| RsaNI | GTAC | 1 cut(s) | 332 |
| SaqAI | TTAA | 3 cut(s) | 119, 144, 272 |
| SetI | ASST | 3 cut(s) | 259, 268, 311 |
| SfaNI | GCATC | 2 cut(s) | 171, 349 |
| SmlI | CTYRAG | 1 cut(s) | 304 |
| SmoI | CTYRAG | 1 cut(s) | 304 |
| Sse9I | AATT | 2 cut(s) | 141, 234 |
| SsiI | CCGC | 1 cut(s) | 344 |
| TaqI | TCGA | 1 cut(s) | 161 |
| TasI | AATT | 2 cut(s) | 141, 234 |
| TatI | WGTACW | 1 cut(s) | 331 |
| Tru1I | TTAA | 3 cut(s) | 119, 144, 272 |
| Tru9I | TTAA | 3 cut(s) | 119, 144, 272 |
| TscAI | CASTG | 1 cut(s) | 198 |
| TspDTI | ATGAA | 4 cut(s) | 24, 87, 93, 141 |
| TspRI | CASTG | 1 cut(s) | 198 |
| VspI | ATTAAT | 1 cut(s) | 144 |
| XapI | RAATTY | 1 cut(s) | 234 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 225 |