Rmu_co8169706.1_g000001

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8169706.1
Physical Location & Seq
Forward (+)
1 .. 529
529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8169706.1_g000001.1.cds

Sequence Viewer

Length: 273 bp
attctgagtgatgggctttataaaagtattgagcacagagtaattgtgaacccagagaaagaaaggatttcaattgctatgttcttcctgcccaaacttgagtcagaaattggacctgtgaccgccctgagagatcctcagaagccaccatctcctgggaaaataaaaatggaaaaatttgtcgagaattacttcgctcataatcttaatggaaaaacacccttggagcgaatcagaacaaaagatggtgaagagaatactactgcaggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

10.18

Weight (kDa)

8.21

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0025525)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8169706.1_g000001 Rmu_sc0002005.1_g000012
rosa_samantha Rh2CG339300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 21
AccB7I CCANNNNNTGG 1 cut(s) 155
AciI CCGC 1 cut(s) 123
AclWI GGATC 1 cut(s) 128
AcsI RAATTY 1 cut(s) 176
AfiI CCNNNNNNNGG 1 cut(s) 155
AgsI TTSAA 1 cut(s) 72
AjnI CCWGG 1 cut(s) 154
Alw21I GWGCWC 1 cut(s) 36
AlwI GGATC 1 cut(s) 128
ApoI RAATTY 1 cut(s) 176
Asp700I GAANNNNTTC 1 cut(s) 191
AspS9I GGNCC 1 cut(s) 113
AsuHPI GGTGA 1 cut(s) 260
AvaII GGWCC 1 cut(s) 113
Bbv12I GWGCWC 1 cut(s) 36
BccI CCATC 3 cut(s) 5, 157, 239
BciT130I CCWGG 1 cut(s) 156
BfmI CTRYAG 1 cut(s) 264
Bme1390I CCNGG 1 cut(s) 156
Bme18I GGWCC 1 cut(s) 113
BmgT120I GGNCC 1 cut(s) 113
BmrFI CCNGG 1 cut(s) 156
BplI GAGNNNNNCTC 2 cut(s) 121, 153
BpuEI CTTGAG 1 cut(s) 119
BsaJI CCNNGG 2 cut(s) 155, 222
Bsc4I CCNNNNNNNGG 1 cut(s) 155
BseBI CCWGG 1 cut(s) 156
BseDI CCNNGG 2 cut(s) 155, 222
BseLI CCNNNNNNNGG 1 cut(s) 155
BseMII CTCAG 2 cut(s) 119, 152
BsiHKAI GWGCWC 1 cut(s) 36
BslI CCNNNNNNNGG 1 cut(s) 155
Bsp1286I GDGCHC 1 cut(s) 36
Bsp143I GATC 1 cut(s) 133
BspACI CCGC 1 cut(s) 123
BspCNI CTCAG 2 cut(s) 120, 151
BspMAI CTGCAG 1 cut(s) 268
BspPI GGATC 1 cut(s) 128
BssECI CCNNGG 2 cut(s) 155, 222
BssMI GATC 1 cut(s) 133
BssT1I CCWWGG 1 cut(s) 222
Bst2UI CCWGG 1 cut(s) 156
Bst6I CTCTTC 1 cut(s) 246
BstDEI CTNAG 3 cut(s) 5, 128, 138
BstKTI GATC 1 cut(s) 136
BstMBI GATC 1 cut(s) 133
BstNI CCWGG 1 cut(s) 156
BstSCI CCNGG 1 cut(s) 154
BstSFI CTRYAG 1 cut(s) 264
BstX2I RGATCY 1 cut(s) 133
BstYI RGATCY 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 113
CviJI RGCY 2 cut(s) 16, 145
CviKI_1 RGCY 2 cut(s) 16, 145
DdeI CTNAG 3 cut(s) 5, 128, 138
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
Eam1104I CTCTTC 1 cut(s) 246
EarI CTCTTC 1 cut(s) 246
Eco130I CCWWGG 1 cut(s) 222
Eco47I GGWCC 1 cut(s) 113
EcoRII CCWGG 1 cut(s) 154
EcoT14I CCWWGG 1 cut(s) 222
ErhI CCWWGG 1 cut(s) 222
FaiI YATR 3 cut(s) 21, 80, 201
HinfI GANTC 2 cut(s) 101, 231
HphI GGTGA 1 cut(s) 260
Hpy166II GTNNAC 1 cut(s) 49
Hpy188I TCNGA 4 cut(s) 6, 106, 141, 236
Hpy188III TCNNGA 1 cut(s) 184
Hpy8I GTNNAC 1 cut(s) 49
HpyCH4V TGCA 1 cut(s) 266
HpyF3I CTNAG 3 cut(s) 5, 128, 138
Kzo9I GATC 1 cut(s) 133
LmnI GCTCC 1 cut(s) 226
LpnPI CCDG 7 cut(s) 66, 101, 129, 140, 141, 168, 252
MaeIII GTNAC 1 cut(s) 118
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MboII GAAGA 2 cut(s) 76, 263
MfeI CAATTG 1 cut(s) 72
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 1 cut(s) 36
MluCI AATT 5 cut(s) 42, 72, 108, 176, 187
MlyI GAGTC 1 cut(s) 110
MnlI CCTC 1 cut(s) 147
MroXI GAANNNNTTC 1 cut(s) 191
MseI TTAA 1 cut(s) 207
MspR9I CCNGG 1 cut(s) 156
MunI CAATTG 1 cut(s) 72
MvaI CCWGG 1 cut(s) 156
NdeII GATC 1 cut(s) 133
NmuCI GTSAC 1 cut(s) 118
PdmI GAANNNNTTC 1 cut(s) 191
PfeI GAWTC 1 cut(s) 231
PflMI CCANNNNNTGG 1 cut(s) 155
PleI GAGTC 1 cut(s) 109
PpsI GAGTC 1 cut(s) 109
PsiI TTATAA 1 cut(s) 21
Psp6I CCWGG 1 cut(s) 154
PspGI CCWGG 1 cut(s) 154
PspPI GGNCC 1 cut(s) 113
PstI CTGCAG 1 cut(s) 268
PsuI RGATCY 1 cut(s) 133
SaqAI TTAA 1 cut(s) 207
Sau3AI GATC 1 cut(s) 133
Sau96I GGNCC 1 cut(s) 113
SchI GAGTC 1 cut(s) 110
ScrFI CCNGG 1 cut(s) 156
SduI GDGCHC 1 cut(s) 36
SetI ASST 1 cut(s) 118
SfcI CTRYAG 1 cut(s) 264
SgeI CNNG 9 cut(s) 65, 100, 110, 128, 139, 167, 168, 196, 235
SinI GGWCC 1 cut(s) 113
SmlI CTYRAG 1 cut(s) 98
SmoI CTYRAG 1 cut(s) 98
Sse9I AATT 5 cut(s) 42, 72, 108, 176, 187
SsiI CCGC 1 cut(s) 123
StyD4I CCNGG 1 cut(s) 154
StyI CCWWGG 1 cut(s) 222
TaqI TCGA 1 cut(s) 183
TasI AATT 5 cut(s) 42, 72, 108, 176, 187
TfiI GAWTC 1 cut(s) 231
Tru1I TTAA 1 cut(s) 207
Tru9I TTAA 1 cut(s) 207
TseFI GTSAC 1 cut(s) 118
Tsp45I GTSAC 1 cut(s) 118
Van91I CCANNNNNTGG 1 cut(s) 155
VpaK11BI GGWCC 1 cut(s) 113
XapI RAATTY 1 cut(s) 176
XmnI GAANNNNTTC 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.