Rmu_co8170246.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8170246.1
Physical Location & Seq
Forward (+)
124 .. 635
512 bp
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UTR
Exon/CDS
Intron
Rmu_co8170246.1_g000001.1.cds

Sequence Viewer

Length: 429 bp
atggacggaaatctacgcgcttttacttacaaggagctcgaagaagccacagatggtttcagagaagaacttggaagaggggcttttggcactgtgtacaagggaatcatatcatctctaagctcaacaaactatgtggcaatcaagaagttggacaaggtggcacaacaaggtgaaaaggaattcaaagcagaagcgagtgcaatagccaagacccatcacaaaaacctcgtcagattgctcggcttttgtgatgaaggggaaaataaactcctagtctatgattttatgagcaatggaacactggctagctttctgtttgggatttcaaggcctgattggaacaaacggatccaaattgcgtttggtattgccagagggctaatcaaggatttcggatttcggattggcaaagcttctgctaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

142

Amino Acids

15.76

Weight (kDa)

9.35

Isoelectric Point (pI)

19.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0031295)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8170246.1_g000001 Rmu_sc0004277.1_g000011

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 18
AclWI GGATC 2 cut(s) 346, 359
AcsI RAATTY 1 cut(s) 182
AfaI GTAC 1 cut(s) 98
AgsI TTSAA 2 cut(s) 187, 330
AluBI AGCT 4 cut(s) 37, 123, 312, 416
AluI AGCT 4 cut(s) 37, 123, 312, 416
Alw21I GWGCWC 1 cut(s) 39
AlwI GGATC 2 cut(s) 346, 359
AoxI GGCC 1 cut(s) 332
ApoI RAATTY 1 cut(s) 182
ArsI GACNNNNNNTTYG 2 cut(s) 216, 248
AspLEI GCGC 1 cut(s) 20
AsuHPI GGTGA 1 cut(s) 185
AsuNHI GCTAGC 1 cut(s) 308
BamHI GGATCC 1 cut(s) 351
BanII GRGCYC 1 cut(s) 39
Bbv12I GWGCWC 1 cut(s) 39
BccI CCATC 2 cut(s) 47, 225
BfaI CTAG 2 cut(s) 275, 309
BmiI GGNNCC 1 cut(s) 353
BmtI GCTAGC 1 cut(s) 312
Bse1I ACTGG 1 cut(s) 309
Bse3DI GCAATG 1 cut(s) 301
BseMI GCAATG 1 cut(s) 301
BseNI ACTGG 1 cut(s) 309
Bsh1236I CGCG 1 cut(s) 18
BshFI GGCC 1 cut(s) 334
BsiHKAI GWGCWC 1 cut(s) 39
BsnI GGCC 1 cut(s) 334
Bsp1286I GDGCHC 1 cut(s) 39
Bsp1407I TGTACA 1 cut(s) 96
Bsp143I GATC 1 cut(s) 351
BspANI GGCC 1 cut(s) 334
BspFNI CGCG 1 cut(s) 18
BspLI GGNNCC 1 cut(s) 353
BspOI GCTAGC 1 cut(s) 312
BspPI GGATC 2 cut(s) 346, 359
BsrDI GCAATG 1 cut(s) 301
BsrGI TGTACA 1 cut(s) 96
BsrI ACTGG 1 cut(s) 309
BssMI GATC 1 cut(s) 351
Bst4CI ACNGT 1 cut(s) 94
Bst6I CTCTTC 1 cut(s) 70
BstAUI TGTACA 1 cut(s) 96
BstC8I GCNNGC 1 cut(s) 310
BstDEI CTNAG 2 cut(s) 119, 423
BstFNI CGCG 1 cut(s) 18
BstHHI GCGC 1 cut(s) 20
BstKTI GATC 1 cut(s) 354
BstMBI GATC 1 cut(s) 351
BstUI CGCG 1 cut(s) 18
BstX2I RGATCY 1 cut(s) 351
BstYI RGATCY 1 cut(s) 351
BsuRI GGCC 1 cut(s) 334
BtsIMutI CAGTG 2 cut(s) 90, 302
Cac8I GCNNGC 1 cut(s) 310
CfoI GCGC 1 cut(s) 20
Csp6I GTAC 1 cut(s) 97
CspCI CAANNNNNGTGG 2 cut(s) 117, 152
CviQI GTAC 1 cut(s) 97
DdeI CTNAG 2 cut(s) 119, 423
DpnI GATC 1 cut(s) 353
DpnII GATC 1 cut(s) 351
Eam1104I CTCTTC 1 cut(s) 70
EarI CTCTTC 1 cut(s) 70
Ecl136II GAGCTC 1 cut(s) 37
Eco147I AGGCCT 1 cut(s) 334
Eco24I GRGCYC 1 cut(s) 39
Eco53kI GAGCTC 1 cut(s) 37
EcoICRI GAGCTC 1 cut(s) 37
EcoRI GAATTC 1 cut(s) 182
EcoT38I GRGCYC 1 cut(s) 39
FaiI YATR 4 cut(s) 110, 135, 282, 290
FalI AAGNNNNNCTT 2 cut(s) 67, 99
FriOI GRGCYC 1 cut(s) 39
FspBI CTAG 2 cut(s) 275, 309
GlaI GCGC 1 cut(s) 19
HaeIII GGCC 1 cut(s) 334
HhaI GCGC 1 cut(s) 20
Hin6I GCGC 1 cut(s) 18
HinP1I GCGC 1 cut(s) 18
HindIII AAGCTT 1 cut(s) 414
HinfI GANTC 1 cut(s) 105
HphI GGTGA 1 cut(s) 185
Hpy166II GTNNAC 1 cut(s) 97
Hpy188I TCNGA 4 cut(s) 62, 236, 398, 405
Hpy188III TCNNGA 1 cut(s) 145
Hpy8I GTNNAC 1 cut(s) 97
HpyAV CCTTC 1 cut(s) 251
HpyCH4III ACNGT 1 cut(s) 94
HpyCH4V TGCA 1 cut(s) 203
HpyF3I CTNAG 2 cut(s) 119, 423
HspAI GCGC 1 cut(s) 18
Kzo9I GATC 1 cut(s) 351
LmnI GCTCC 1 cut(s) 34
LpnPI CCDG 3 cut(s) 290, 348, 388
MaeI CTAG 2 cut(s) 275, 309
MalI GATC 1 cut(s) 353
MboI GATC 1 cut(s) 351
MboII GAAGA 3 cut(s) 53, 77, 87
MflI RGATCY 1 cut(s) 351
MhlI GDGCHC 1 cut(s) 39
MluCI AATT 2 cut(s) 182, 357
MmeI TCCRAC 1 cut(s) 132
MnlI CCTC 3 cut(s) 71, 239, 371
MvnI CGCG 1 cut(s) 18
NdeII GATC 1 cut(s) 351
NheI GCTAGC 1 cut(s) 308
NlaIV GGNNCC 1 cut(s) 353
NmeAIII GCCGAG 1 cut(s) 222
PceI AGGCCT 1 cut(s) 334
PfeI GAWTC 1 cut(s) 105
Psp124BI GAGCTC 1 cut(s) 39
PspN4I GGNNCC 1 cut(s) 353
PsuI RGATCY 1 cut(s) 351
RsaI GTAC 1 cut(s) 98
RsaNI GTAC 1 cut(s) 97
SacI GAGCTC 1 cut(s) 39
Sau3AI GATC 1 cut(s) 351
SduI GDGCHC 1 cut(s) 39
SetI ASST 7 cut(s) 39, 125, 162, 175, 231, 314, 418
Sse9I AATT 2 cut(s) 182, 357
SseBI AGGCCT 1 cut(s) 334
SspMI CTAG 2 cut(s) 275, 309
SstI GAGCTC 1 cut(s) 39
StuI AGGCCT 1 cut(s) 334
TaaI ACNGT 1 cut(s) 94
TaqI TCGA 1 cut(s) 39
TasI AATT 2 cut(s) 182, 357
TatI WGTACW 1 cut(s) 96
TfiI GAWTC 1 cut(s) 105
TscAI CASTG 2 cut(s) 97, 309
TspDTI ATGAA 1 cut(s) 270
TspGWI ACGGA 2 cut(s) 21, 364
TspRI CASTG 2 cut(s) 97, 309
XapI RAATTY 1 cut(s) 182
XcmI CCANNNNNNNNNTGG 1 cut(s) 362
XspI CTAG 2 cut(s) 275, 309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.