Rmu_sc0004277.1_g000011

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004277.1
Physical Location & Seq
Reverse (-)
20481 .. 20879
399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004277.1_g000011.1.cds

Sequence Viewer

Length: 399 bp
atggttgtttctcgtatttattctagaaaaggaaaggtgaatcaatctttcccatcccttgaagaagtgaatctgaaatgcttcacttacgaggagttacaagaagctacaaatggattcaaggaagaaataggccgtgttgcttctgcaactgtttctaaaggagttttagcatttgatgatgcaaaatgtactgctgtcaaaagattgagcactatggttggagaaaatgagtttgaattcaaagctgaagtgagtgcaattgcgagaacaaatcacagaaatttagttaaactaataggcttctgcaatgagggacatcaccggcttcttgtatatgagtttatgagcaatggctttctagcaagcttcctctttggagagtcaaggccaaactag

Protein Analysis

132

Amino Acids

14.83

Weight (kDa)

7.73

Isoelectric Point (pI)

31.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031295)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8170246.1_g000001 Rmu_sc0004277.1_g000011

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 239, 283
AcuI CTGAAG 1 cut(s) 270
AfaI GTAC 1 cut(s) 193
AgsI TTSAA 4 cut(s) 62, 121, 239, 244
AluBI AGCT 3 cut(s) 107, 248, 369
AluI AGCT 3 cut(s) 107, 248, 369
Alw21I GWGCWC 1 cut(s) 215
AoxI GGCC 2 cut(s) 133, 389
ApoI RAATTY 2 cut(s) 239, 283
Asp700I GAANNNNTTC 1 cut(s) 80
AsuHPI GGTGA 2 cut(s) 49, 314
Bbv12I GWGCWC 1 cut(s) 215
BccI CCATC 1 cut(s) 61
BceAI ACGGC 1 cut(s) 120
BfaI CTAG 3 cut(s) 24, 362, 397
BmsI GCATC 1 cut(s) 172
Bse118I RCCGGY 1 cut(s) 324
Bse3DI GCAATG 2 cut(s) 316, 358
BseGI GGATG 1 cut(s) 53
BseMI GCAATG 2 cut(s) 316, 358
BseRI GAGGAG 1 cut(s) 107
BshFI GGCC 2 cut(s) 135, 391
BsiHKAI GWGCWC 1 cut(s) 215
BsiSI CCGG 1 cut(s) 325
BslFI GGGAC 1 cut(s) 330
BsmFI GGGAC 1 cut(s) 330
BsnI GGCC 2 cut(s) 135, 391
Bsp1286I GDGCHC 1 cut(s) 215
BspANI GGCC 2 cut(s) 135, 391
BsrDI GCAATG 2 cut(s) 316, 358
BsrFI RCCGGY 1 cut(s) 324
BssAI RCCGGY 1 cut(s) 324
Bst4CI ACNGT 1 cut(s) 154
BstC8I GCNNGC 1 cut(s) 367
BstF5I GGATG 1 cut(s) 53
BsuRI GGCC 2 cut(s) 135, 391
BtsCI GGATG 1 cut(s) 53
Cac8I GCNNGC 1 cut(s) 367
Cfr10I RCCGGY 1 cut(s) 324
Csp6I GTAC 1 cut(s) 192
CviJI RGCY 8 cut(s) 107, 135, 248, 303, 328, 357, 369, 391
CviKI_1 RGCY 8 cut(s) 107, 135, 248, 303, 328, 357, 369, 391
CviQI GTAC 1 cut(s) 192
Eco57I CTGAAG 1 cut(s) 270
EcoRI GAATTC 1 cut(s) 239
FaiI YATR 4 cut(s) 218, 337, 339, 347
FaqI GGGAC 1 cut(s) 330
FokI GGATG 1 cut(s) 40
FspBI CTAG 3 cut(s) 24, 362, 397
HaeIII GGCC 2 cut(s) 135, 391
HapII CCGG 1 cut(s) 325
HindIII AAGCTT 1 cut(s) 367
HinfI GANTC 4 cut(s) 40, 70, 117, 383
HpaII CCGG 1 cut(s) 325
HphI GGTGA 2 cut(s) 49, 314
Hpy188I TCNGA 1 cut(s) 75
Hpy188III TCNNGA 1 cut(s) 24
HpyCH4III ACNGT 1 cut(s) 154
HpyCH4V TGCA 4 cut(s) 149, 185, 260, 309
LpnPI CCDG 1 cut(s) 338
LweI GCATC 1 cut(s) 172
MaeI CTAG 3 cut(s) 24, 362, 397
MaeIII GTNAC 1 cut(s) 96
MboII GAAGA 2 cut(s) 74, 137
MfeI CAATTG 1 cut(s) 261
MhlI GDGCHC 1 cut(s) 215
MluCI AATT 3 cut(s) 239, 261, 283
MlyI GAGTC 1 cut(s) 392
MmeI TCCRAC 1 cut(s) 202
MnlI CCTC 3 cut(s) 85, 307, 383
MroXI GAANNNNTTC 1 cut(s) 80
MseI TTAA 1 cut(s) 291
MspI CCGG 1 cut(s) 325
MunI CAATTG 1 cut(s) 261
PdmI GAANNNNTTC 1 cut(s) 80
PfeI GAWTC 3 cut(s) 40, 70, 117
PleI GAGTC 1 cut(s) 391
PpsI GAGTC 1 cut(s) 391
RsaI GTAC 1 cut(s) 193
RsaNI GTAC 1 cut(s) 192
SaqAI TTAA 1 cut(s) 291
SchI GAGTC 1 cut(s) 392
SduI GDGCHC 1 cut(s) 215
SetI ASST 4 cut(s) 39, 109, 250, 371
SfaNI GCATC 1 cut(s) 172
Sse9I AATT 3 cut(s) 239, 261, 283
SspMI CTAG 3 cut(s) 24, 362, 397
TaaI ACNGT 1 cut(s) 154
TasI AATT 3 cut(s) 239, 261, 283
TatI WGTACW 1 cut(s) 191
TfiI GAWTC 3 cut(s) 40, 70, 117
Tru1I TTAA 1 cut(s) 291
Tru9I TTAA 1 cut(s) 291
XapI RAATTY 2 cut(s) 239, 283
XbaI TCTAGA 1 cut(s) 23
XmnI GAANNNNTTC 1 cut(s) 80
XspI CTAG 3 cut(s) 24, 362, 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.