Rmu_co8190276.1_g000001

11S globulin seed storage protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8190276.1
Physical Location & Seq
Reverse (-)
122 .. 601
480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8190276.1_g000001.1.cds

Sequence Viewer

Length: 480 bp
atgctcagaggtttctcgactgacttcattagcaagtcattcaatattaccaaagatgaagctgatgaggtcaccaaaaaccagacaggggttttgctagttaagctagaacagggaaagaccatgcctaagcccaacgcactcgtcacccacaaacttgttcatcaactcactattagtgccactttgactgagaaggagtttccttttcttaaccaagctgggttaagtgccaacctcataaaacttgaaccctatgcaatttcctctcccatttacactactgattcttcggttcaagtgatctatgtcgttagaggaggtggtcgggtccaaattgcgggtcttaatggtcagagtgcgttggatgcagaagtaactgcgggtcacttgatcgttgtgcctaggtttttcatggtagcgaaacttgctggggaaaaaggaatggagtgtttctctgtcattacaagttcccggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

159

Amino Acids

17.23

Weight (kDa)

8.71

Isoelectric Point (pI)

29.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031367)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8190276.1_g000001 Rmu_sc0006266.1_g000002

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 341, 383
AfiI CCNNNNNNNGG 2 cut(s) 88, 340
AgsI TTSAA 3 cut(s) 43, 251, 299
AluBI AGCT 3 cut(s) 62, 106, 221
AluI AGCT 3 cut(s) 62, 106, 221
ArsI GACNNNNNNTTYG 4 cut(s) 76, 108, 328, 360
AspA2I CCTAGG 1 cut(s) 404
AspS9I GGNCC 1 cut(s) 331
AsuC2I CCSGG 1 cut(s) 475
AsuHPI GGTGA 2 cut(s) 64, 139
AvaII GGWCC 1 cut(s) 331
AvrII CCTAGG 1 cut(s) 404
BcnI CCSGG 1 cut(s) 475
BfaI CTAG 3 cut(s) 98, 107, 405
BlnI CCTAGG 1 cut(s) 404
Bme1390I CCNGG 1 cut(s) 475
Bme18I GGWCC 1 cut(s) 331
BmgT120I GGNCC 1 cut(s) 331
BmiI GGNNCC 1 cut(s) 332
BmrFI CCNGG 1 cut(s) 475
BmsI GCATC 1 cut(s) 358
BplI GAGNNNNNCTC 2 cut(s) 440, 472
Bpu10I CCTNAGC 1 cut(s) 129
BpuMI CCSGG 1 cut(s) 475
BsaJI CCNNGG 1 cut(s) 404
Bsc4I CCNNNNNNNGG 2 cut(s) 88, 340
BseDI CCNNGG 1 cut(s) 404
BseGI GGATG 1 cut(s) 373
BseLI CCNNNNNNNGG 2 cut(s) 88, 340
BseMII CTCAG 2 cut(s) 19, 183
BseRI GAGGAG 1 cut(s) 333
BseYI CCCAGC 2 cut(s) 221, 431
BsiSI CCGG 1 cut(s) 475
BslI CCNNNNNNNGG 2 cut(s) 88, 340
Bsp143I GATC 2 cut(s) 303, 393
BspACI CCGC 2 cut(s) 341, 383
BspCNI CTCAG 2 cut(s) 18, 184
BspLI GGNNCC 1 cut(s) 332
BssECI CCNNGG 1 cut(s) 404
BssMI GATC 2 cut(s) 303, 393
BssT1I CCWWGG 1 cut(s) 404
BstDEI CTNAG 3 cut(s) 5, 129, 192
BstEII GGTNACC 1 cut(s) 70
BstF5I GGATG 1 cut(s) 373
BstKTI GATC 2 cut(s) 306, 396
BstMBI GATC 2 cut(s) 303, 393
BstMWI GCNNNNNNNGC 3 cut(s) 103, 368, 428
BstPI GGTNACC 1 cut(s) 70
BstSCI CCNGG 1 cut(s) 473
BtsCI GGATG 1 cut(s) 373
Cfr13I GGNCC 1 cut(s) 331
CviAII CATG 2 cut(s) 124, 415
CviJI RGCY 4 cut(s) 62, 106, 133, 221
CviKI_1 RGCY 4 cut(s) 62, 106, 133, 221
DdeI CTNAG 3 cut(s) 5, 129, 192
DpnI GATC 2 cut(s) 305, 395
DpnII GATC 2 cut(s) 303, 393
Eco130I CCWWGG 1 cut(s) 404
Eco47I GGWCC 1 cut(s) 331
Eco91I GGTNACC 1 cut(s) 70
EcoO65I GGTNACC 1 cut(s) 70
EcoT14I CCWWGG 1 cut(s) 404
ErhI CCWWGG 1 cut(s) 404
FaeI CATG 2 cut(s) 127, 418
FaiI YATR 5 cut(s) 125, 242, 258, 309, 416
FatI CATG 2 cut(s) 123, 414
FauI CCCGC 2 cut(s) 334, 376
FokI GGATG 1 cut(s) 380
FspBI CTAG 3 cut(s) 98, 107, 405
GsaI CCCAGC 2 cut(s) 225, 435
HapII CCGG 1 cut(s) 475
Hin1II CATG 2 cut(s) 127, 418
HinfI GANTC 1 cut(s) 287
HpaII CCGG 1 cut(s) 475
HphI GGTGA 2 cut(s) 64, 139
Hpy188I TCNGA 2 cut(s) 8, 357
Hpy188III TCNNGA 1 cut(s) 16
HpyAV CCTTC 1 cut(s) 190
HpyCH4V TGCA 2 cut(s) 260, 371
HpyF10VI GCNNNNNNNGC 3 cut(s) 103, 368, 428
HpyF3I CTNAG 3 cut(s) 5, 129, 192
Hsp92II CATG 2 cut(s) 127, 418
Kzo9I GATC 2 cut(s) 303, 393
LpnPI CCDG 5 cut(s) 72, 95, 98, 207, 417
LweI GCATC 1 cut(s) 358
MaeI CTAG 3 cut(s) 98, 107, 405
MaeIII GTNAC 4 cut(s) 70, 145, 376, 386
MalI GATC 2 cut(s) 305, 395
MboI GATC 2 cut(s) 303, 393
MboII GAAGA 1 cut(s) 282
MluCI AATT 2 cut(s) 261, 336
MmeI TCCRAC 1 cut(s) 345
MnlI CCTC 5 cut(s) 61, 248, 277, 311, 314
MseI TTAA 4 cut(s) 102, 213, 227, 348
MspI CCGG 1 cut(s) 475
MspR9I CCNGG 1 cut(s) 475
MwoI GCNNNNNNNGC 3 cut(s) 103, 368, 428
NciI CCSGG 1 cut(s) 475
NdeII GATC 2 cut(s) 303, 393
NlaIII CATG 2 cut(s) 127, 418
NlaIV GGNNCC 1 cut(s) 332
NmuCI GTSAC 3 cut(s) 70, 145, 386
PfeI GAWTC 1 cut(s) 287
PspEI GGTNACC 1 cut(s) 70
PspFI CCCAGC 2 cut(s) 221, 431
PspN4I GGNNCC 1 cut(s) 332
PspPI GGNCC 1 cut(s) 331
SaqAI TTAA 4 cut(s) 102, 213, 227, 348
Sau3AI GATC 2 cut(s) 303, 393
Sau96I GGNCC 1 cut(s) 331
ScrFI CCNGG 1 cut(s) 475
SetI ASST 8 cut(s) 13, 64, 72, 108, 223, 240, 325, 410
SfaNI GCATC 1 cut(s) 358
SinI GGWCC 1 cut(s) 331
Sse9I AATT 2 cut(s) 261, 336
SsiI CCGC 2 cut(s) 341, 383
SspI AATATT 1 cut(s) 46
SspMI CTAG 3 cut(s) 98, 107, 405
StyD4I CCNGG 1 cut(s) 473
StyI CCWWGG 1 cut(s) 404
TaqI TCGA 1 cut(s) 17
TasI AATT 2 cut(s) 261, 336
TfiI GAWTC 1 cut(s) 287
Tru1I TTAA 4 cut(s) 102, 213, 227, 348
Tru9I TTAA 4 cut(s) 102, 213, 227, 348
TseFI GTSAC 3 cut(s) 70, 145, 386
Tsp45I GTSAC 3 cut(s) 70, 145, 386
TspDTI ATGAA 4 cut(s) 16, 72, 152, 403
VpaK11BI GGWCC 1 cut(s) 331
XmaJI CCTAGG 1 cut(s) 404
XspI CTAG 3 cut(s) 98, 107, 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.