E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD14G1024200.v1.1 |
| pyrus_communis | pycom14g02350 |
| rosa_multiflora | Rmu_co8240307.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 152 |
| AciI | CCGC | 1 cut(s) | 120 |
| AcuI | CTGAAG | 1 cut(s) | 175 |
| AfaI | GTAC | 1 cut(s) | 220 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 152 |
| AgsI | TTSAA | 1 cut(s) | 23 |
| AluBI | AGCT | 2 cut(s) | 51, 195 |
| AluI | AGCT | 2 cut(s) | 51, 195 |
| AoxI | GGCC | 1 cut(s) | 340 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 258 |
| AspS9I | GGNCC | 1 cut(s) | 281 |
| AvaII | GGWCC | 1 cut(s) | 281 |
| BbsI | GAAGAC | 2 cut(s) | 116, 181 |
| BccI | CCATC | 2 cut(s) | 304, 365 |
| BclI | TGATCA | 2 cut(s) | 178, 360 |
| Bme18I | GGWCC | 1 cut(s) | 281 |
| BmgT120I | GGNCC | 1 cut(s) | 281 |
| BmsI | GCATC | 3 cut(s) | 64, 154, 176 |
| BpiI | GAAGAC | 2 cut(s) | 116, 181 |
| Bsa29I | ATCGAT | 1 cut(s) | 98 |
| BsaBI | GATNNNNATC | 1 cut(s) | 314 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 152 |
| Bse1I | ACTGG | 2 cut(s) | 73, 226 |
| Bse3DI | GCAATG | 1 cut(s) | 363 |
| Bse8I | GATNNNNATC | 1 cut(s) | 314 |
| BseCI | ATCGAT | 1 cut(s) | 98 |
| BseJI | GATNNNNATC | 1 cut(s) | 314 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BseMI | GCAATG | 1 cut(s) | 363 |
| BseNI | ACTGG | 2 cut(s) | 73, 226 |
| BshFI | GGCC | 1 cut(s) | 342 |
| BshVI | ATCGAT | 1 cut(s) | 98 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BsnI | GGCC | 1 cut(s) | 342 |
| Bsp143I | GATC | 2 cut(s) | 178, 360 |
| BspACI | CCGC | 1 cut(s) | 120 |
| BspANI | GGCC | 1 cut(s) | 342 |
| BspDI | ATCGAT | 1 cut(s) | 98 |
| BsrDI | GCAATG | 1 cut(s) | 363 |
| BsrI | ACTGG | 2 cut(s) | 73, 226 |
| BssMI | GATC | 2 cut(s) | 178, 360 |
| Bst6I | CTCTTC | 1 cut(s) | 273 |
| BstC8I | GCNNGC | 1 cut(s) | 53 |
| BstKTI | GATC | 2 cut(s) | 181, 363 |
| BstMBI | GATC | 2 cut(s) | 178, 360 |
| BstV2I | GAAGAC | 2 cut(s) | 116, 181 |
| Bsu15I | ATCGAT | 1 cut(s) | 98 |
| BsuRI | GGCC | 1 cut(s) | 342 |
| BsuTUI | ATCGAT | 1 cut(s) | 98 |
| Cac8I | GCNNGC | 1 cut(s) | 53 |
| Cfr13I | GGNCC | 1 cut(s) | 281 |
| ClaI | ATCGAT | 1 cut(s) | 98 |
| Csp6I | GTAC | 1 cut(s) | 219 |
| CviAII | CATG | 3 cut(s) | 147, 176, 350 |
| CviJI | RGCY | 3 cut(s) | 51, 195, 342 |
| CviKI_1 | RGCY | 3 cut(s) | 51, 195, 342 |
| CviQI | GTAC | 1 cut(s) | 219 |
| DpnI | GATC | 2 cut(s) | 180, 362 |
| DpnII | GATC | 2 cut(s) | 178, 360 |
| Eam1104I | CTCTTC | 1 cut(s) | 273 |
| EarI | CTCTTC | 1 cut(s) | 273 |
| Eco47I | GGWCC | 1 cut(s) | 281 |
| Eco57I | CTGAAG | 1 cut(s) | 175 |
| EcoO109I | RGGNCCY | 1 cut(s) | 281 |
| EcoT22I | ATGCAT | 1 cut(s) | 169 |
| FaeI | CATG | 3 cut(s) | 150, 179, 353 |
| FaiI | YATR | 6 cut(s) | 84, 148, 153, 177, 249, 351 |
| FatI | CATG | 3 cut(s) | 146, 175, 349 |
| FbaI | TGATCA | 2 cut(s) | 178, 360 |
| HaeIII | GGCC | 1 cut(s) | 342 |
| Hin1II | CATG | 3 cut(s) | 150, 179, 353 |
| HindIII | AAGCTT | 1 cut(s) | 49 |
| HinfI | GANTC | 1 cut(s) | 225 |
| Hpy188I | TCNGA | 1 cut(s) | 45 |
| Hpy188III | TCNNGA | 3 cut(s) | 106, 182, 203 |
| HpyAV | CCTTC | 1 cut(s) | 17 |
| HpyCH4V | TGCA | 4 cut(s) | 55, 167, 278, 296 |
| Hsp92II | CATG | 3 cut(s) | 150, 179, 353 |
| Ksp22I | TGATCA | 2 cut(s) | 178, 360 |
| Kzo9I | GATC | 2 cut(s) | 178, 360 |
| LpnPI | CCDG | 4 cut(s) | 54, 207, 216, 264 |
| LweI | GCATC | 3 cut(s) | 64, 154, 176 |
| MalI | GATC | 2 cut(s) | 180, 362 |
| MboI | GATC | 2 cut(s) | 178, 360 |
| MboII | GAAGA | 4 cut(s) | 121, 143, 181, 260 |
| MluCI | AATT | 2 cut(s) | 141, 255 |
| MmeI | TCCRAC | 2 cut(s) | 23, 287 |
| MnlI | CCTC | 3 cut(s) | 24, 223, 332 |
| Mph1103I | ATGCAT | 1 cut(s) | 169 |
| MroXI | GAANNNNTTC | 1 cut(s) | 258 |
| NdeII | GATC | 2 cut(s) | 178, 360 |
| NlaIII | CATG | 3 cut(s) | 150, 179, 353 |
| NsiI | ATGCAT | 1 cut(s) | 169 |
| PdmI | GAANNNNTTC | 1 cut(s) | 258 |
| PfeI | GAWTC | 1 cut(s) | 225 |
| PflFI | GACNNNGTC | 1 cut(s) | 115 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 152 |
| PpuMI | RGGWCCY | 1 cut(s) | 281 |
| Psp5II | RGGWCCY | 1 cut(s) | 281 |
| PspPI | GGNCC | 1 cut(s) | 281 |
| PspPPI | RGGWCCY | 1 cut(s) | 281 |
| PsyI | GACNNNGTC | 1 cut(s) | 115 |
| RsaI | GTAC | 1 cut(s) | 220 |
| RsaNI | GTAC | 1 cut(s) | 219 |
| Sau3AI | GATC | 2 cut(s) | 178, 360 |
| Sau96I | GGNCC | 1 cut(s) | 281 |
| SetI | ASST | 5 cut(s) | 28, 35, 53, 197, 286 |
| SfaNI | GCATC | 3 cut(s) | 64, 154, 176 |
| SinI | GGWCC | 1 cut(s) | 281 |
| Sse9I | AATT | 2 cut(s) | 141, 255 |
| SsiI | CCGC | 1 cut(s) | 120 |
| TaqI | TCGA | 4 cut(s) | 29, 98, 228, 271 |
| TasI | AATT | 2 cut(s) | 141, 255 |
| TatI | WGTACW | 1 cut(s) | 218 |
| TfiI | GAWTC | 1 cut(s) | 225 |
| TspDTI | ATGAA | 2 cut(s) | 99, 144 |
| Tth111I | GACNNNGTC | 1 cut(s) | 115 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 152 |
| VpaK11BI | GGWCC | 1 cut(s) | 281 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 307 |
| XmnI | GAANNNNTTC | 1 cut(s) | 258 |
| Zsp2I | ATGCAT | 1 cut(s) | 169 |