Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8259695.1

Orthogroup ID

OG0031391

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 662

Gene Structure 661 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8259695.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 661 bp

atgagtgtggtgggatttgattttggcaatgagagtggcattgtggccgtggtaaggcacaacggtatcgatgttgtgctcaatgatgagtccaaacacgaaactcctgccattgtttgtttcggggataagcagcggttcattgggaccgcaggcgctgcttcatctatgatgaaccctaagaacacgatttcgcagatcaaacgcttggttggaaagaaattctcggatcctgtgttgcagagggatatcaagtccctgccttttgctgttactgaagggcctgatggatatccattgatccatgcccattatttgggagaagccaagacattcacgcccacccaagttttgggaatggtgttctctgatctgaaaatcatagcccagaagaatcttaatgcagcagttgtagactgctgtataggaattccggtttatttcactgatctccaaagaagagctgttgaggatgcagccagaattgctgggttgaaccctcttaggttgtttcatgaaactacagcaactgctttggcttatggaatctacaagacagatttaccagagaacgaccaattgaatgttgcctttgttgatattgggcatgctagcatgcaagtttgcattgctggcttcaagaaggggcagctgaaagttc

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0008144 GO:0008150 GO:0009266 GO:0009408 GO:0009506 GO:0009628 GO:0010035 GO:0010038 GO:0016020 GO:0017076 GO:0030054 GO:0030312 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0055044 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04530 ko04612 map04530 map04612

Pfam Domains

Protein Families

HSP70 MreB_Mbl

Protein Analysis

220

Amino Acids

23.86

Weight (kDa)

7.0

Isoelectric Point (pI)

22.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0031391)

Species	Orthologous Gene IDs
rosa_multiflora	Rmu_co8259695.1_g000001 Rmu_sc0007548.1_g000003

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	316, 352
AccI	GTMKAC	1 cut(s)	414
AciI	CCGC	2 cut(s)	136, 150
AclWI	GGATC	3 cut(s)	224, 237, 295
AcoI	YGGCCR	1 cut(s)	45
AcsI	RAATTY	2 cut(s)	221, 429
AcuI	CTGAAG	1 cut(s)	297
AfiI	CCNNNNNNNGG	3 cut(s)	54, 316, 352
AgsI	TTSAA	3 cut(s)	496, 583, 640
AluBI	AGCT	2 cut(s)	464, 652
AluI	AGCT	2 cut(s)	464, 652
Alw21I	GWGCWC	1 cut(s)	81
AlwI	GGATC	3 cut(s)	224, 237, 295
AlwNI	CAGNNNCTG	2 cut(s)	158, 530
AoxI	GGCC	2 cut(s)	45, 281
ApeKI	GCWGC	5 cut(s)	133, 158, 404, 476, 649
ApoI	RAATTY	2 cut(s)	221, 429
AspLEI	GCGC	1 cut(s)	158
AspS9I	GGNCC	2 cut(s)	147, 281
AsuNHI	GCTAGC	1 cut(s)	611
AvaII	GGWCC	1 cut(s)	147
BaeI	ACNNNNGTAYC	2 cut(s)	49, 82
BamHI	GGATCC	1 cut(s)	229
Bbv12I	GWGCWC	1 cut(s)	81
BbvI	GCAGC	4 cut(s)	145, 145, 416, 488
BccI	CCATC	1 cut(s)	281
BceAI	ACGGC	1 cut(s)	32
BcgI	CGANNNNNNTGC	2 cut(s)	89, 123
BfaI	CTAG	1 cut(s)	612
BfmI	CTRYAG	1 cut(s)	522
BfoI	RGCGCY	1 cut(s)	159
BisI	GCNGC	5 cut(s)	134, 159, 405, 477, 650
BlsI	GCNGC	5 cut(s)	135, 160, 406, 478, 651
Bme18I	GGWCC	1 cut(s)	147
BmgT120I	GGNCC	2 cut(s)	147, 281
BmiI	GGNNCC	2 cut(s)	148, 231
BmsI	GCATC	1 cut(s)	463
BmtI	GCTAGC	1 cut(s)	615
Bsa29I	ATCGAT	1 cut(s)	69
BsaBI	GATNNNNATC	1 cut(s)	291
BsaJI	CCNNGG	1 cut(s)	48
BsaWI	WCCGGW	1 cut(s)	433
Bsc4I	CCNNNNNNNGG	3 cut(s)	54, 316, 352
Bse3DI	GCAATG	2 cut(s)	34, 627
Bse8I	GATNNNNATC	1 cut(s)	291
BseCI	ATCGAT	1 cut(s)	69
BseDI	CCNNGG	1 cut(s)	48
BseGI	GGATG	1 cut(s)	478
BseJI	GATNNNNATC	1 cut(s)	291
BseLI	CCNNNNNNNGG	3 cut(s)	54, 316, 352
BseMI	GCAATG	2 cut(s)	34, 627
BseXI	GCAGC	4 cut(s)	145, 145, 416, 488
BseYI	CCCAGC	1 cut(s)	488
BshFI	GGCC	2 cut(s)	47, 283
BshVI	ATCGAT	1 cut(s)	69
BsiHKAI	GWGCWC	1 cut(s)	81
BsiSI	CCGG	1 cut(s)	434
BslFI	GGGAC	2 cut(s)	160, 241
BslI	CCNNNNNNNGG	3 cut(s)	54, 316, 352
BsmFI	GGGAC	2 cut(s)	160, 241
BsnI	GGCC	2 cut(s)	47, 283
Bsp1286I	GDGCHC	1 cut(s)	81
Bsp143I	GATC	5 cut(s)	198, 229, 300, 370, 448
BspACI	CCGC	2 cut(s)	136, 150
BspANI	GGCC	2 cut(s)	47, 283
BspDI	ATCGAT	1 cut(s)	69
BspHI	TCATGA	1 cut(s)	514
BspLI	GGNNCC	2 cut(s)	148, 231
BspOI	GCTAGC	1 cut(s)	615
BspPI	GGATC	3 cut(s)	224, 237, 295
BspQI	GCTCTTC	1 cut(s)	454
BsrDI	GCAATG	2 cut(s)	34, 627
BssECI	CCNNGG	1 cut(s)	48
BssMI	GATC	5 cut(s)	198, 229, 300, 370, 448
Bst4CI	ACNGT	1 cut(s)	65
Bst6I	CTCTTC	1 cut(s)	454
BstAPI	GCANNNNNTGC	1 cut(s)	158
BstC8I	GCNNGC	5 cut(s)	154, 609, 613, 617, 634
BstDEI	CTNAG	2 cut(s)	180, 503
BstDSI	CCRYGG	1 cut(s)	48
BstF5I	GGATG	1 cut(s)	478
BstH2I	RGCGCY	1 cut(s)	159
BstHHI	GCGC	1 cut(s)	158
BstKTI	GATC	5 cut(s)	201, 232, 303, 373, 451
BstMBI	GATC	5 cut(s)	198, 229, 300, 370, 448
BstMWI	GCNNNNNNNGC	3 cut(s)	158, 485, 633
BstNSI	RCATGY	2 cut(s)	611, 619
BstSFI	CTRYAG	1 cut(s)	522
BstV1I	GCAGC	4 cut(s)	145, 145, 416, 488
BstX2I	RGATCY	1 cut(s)	229
BstYI	RGATCY	1 cut(s)	229
Bsu15I	ATCGAT	1 cut(s)	69
BsuRI	GGCC	2 cut(s)	47, 283
BsuTUI	ATCGAT	1 cut(s)	69
BtgI	CCRYGG	1 cut(s)	48
BtsCI	GGATG	1 cut(s)	478
BtsIMutI	CAGTG	1 cut(s)	444
Cac8I	GCNNGC	5 cut(s)	154, 609, 613, 617, 634
CaiI	CAGNNNCTG	2 cut(s)	158, 530
CciI	TCATGA	1 cut(s)	514
CfoI	GCGC	1 cut(s)	158
Cfr13I	GGNCC	2 cut(s)	147, 281
ClaI	ATCGAT	1 cut(s)	69
CspCI	CAANNNNNGTGG	2 cut(s)	16, 51
CviAII	CATG	4 cut(s)	305, 515, 608, 616
CviJI	RGCY	9 cut(s)	47, 283, 326, 386, 464, 479, 539, 636, 652
CviKI_1	RGCY	9 cut(s)	47, 283, 326, 386, 464, 479, 539, 636, 652
DdeI	CTNAG	2 cut(s)	180, 503
DpnI	GATC	5 cut(s)	200, 231, 302, 372, 450
DpnII	GATC	5 cut(s)	198, 229, 300, 370, 448
EaeI	YGGCCR	1 cut(s)	45
Eam1104I	CTCTTC	1 cut(s)	454
EarI	CTCTTC	1 cut(s)	454
Eco32I	GATATC	2 cut(s)	250, 293
Eco47I	GGWCC	1 cut(s)	147
Eco57I	CTGAAG	1 cut(s)	297
EcoO109I	RGGNCCY	1 cut(s)	281
EcoRI	GAATTC	1 cut(s)	429
EcoRV	GATATC	2 cut(s)	250, 293
FaeI	CATG	4 cut(s)	308, 518, 611, 619
FaiI	YATR	8 cut(s)	170, 306, 383, 425, 516, 543, 609, 617
FaqI	GGGAC	2 cut(s)	160, 241
FatI	CATG	4 cut(s)	304, 514, 607, 615
FblI	GTMKAC	1 cut(s)	414
Fnu4HI	GCNGC	5 cut(s)	134, 159, 405, 477, 650
FokI	GGATG	1 cut(s)	485
Fsp4HI	GCNGC	5 cut(s)	134, 159, 405, 477, 650
FspBI	CTAG	1 cut(s)	612
GlaI	GCGC	1 cut(s)	157
GluI	GCNGC	5 cut(s)	134, 159, 405, 477, 650
GsaI	CCCAGC	1 cut(s)	492
HaeII	RGCGCY	1 cut(s)	159
HaeIII	GGCC	2 cut(s)	47, 283
HapII	CCGG	1 cut(s)	434
HhaI	GCGC	1 cut(s)	158
Hin1II	CATG	4 cut(s)	308, 518, 611, 619
Hin6I	GCGC	1 cut(s)	156
HinP1I	GCGC	1 cut(s)	156
HinfI	GANTC	3 cut(s)	89, 394, 546
HpaII	CCGG	1 cut(s)	434
Hpy166II	GTNNAC	1 cut(s)	415
Hpy188I	TCNGA	3 cut(s)	229, 370, 375
Hpy188III	TCNNGA	2 cut(s)	515, 640
Hpy8I	GTNNAC	1 cut(s)	415
HpyAV	CCTTC	2 cut(s)	272, 637
HpyCH4III	ACNGT	1 cut(s)	65
HpyCH4V	TGCA	5 cut(s)	241, 404, 476, 619, 627
HpyF10VI	GCNNNNNNNGC	3 cut(s)	158, 485, 633
HpyF3I	CTNAG	2 cut(s)	180, 503
Hsp92II	CATG	4 cut(s)	308, 518, 611, 619
HspAI	GCGC	1 cut(s)	156
Kzo9I	GATC	5 cut(s)	198, 229, 300, 370, 448
LguI	GCTCTTC	1 cut(s)	454
Lsp1109I	GCAGC	4 cut(s)	145, 145, 416, 488
LweI	GCATC	1 cut(s)	463
MaeI	CTAG	1 cut(s)	612
MaeIII	GTNAC	1 cut(s)	271
MalI	GATC	5 cut(s)	200, 231, 302, 372, 450
MboI	GATC	5 cut(s)	198, 229, 300, 370, 448
MboII	GAAGA	2 cut(s)	403, 471
MfeI	CAATTG	1 cut(s)	578
MflI	RGATCY	1 cut(s)	229
MhlI	GDGCHC	1 cut(s)	81
MluCI	AATT	4 cut(s)	221, 429, 483, 578
MlyI	GAGTC	1 cut(s)	98
MmeI	TCCRAC	1 cut(s)	193
MnlI	CCTC	3 cut(s)	237, 463, 510
MseI	TTAA	1 cut(s)	399
MspA1I	CMGCKG	2 cut(s)	136, 652
MspI	CCGG	1 cut(s)	434
MunI	CAATTG	1 cut(s)	578
MwoI	GCNNNNNNNGC	3 cut(s)	158, 485, 633
NdeII	GATC	5 cut(s)	198, 229, 300, 370, 448
NheI	GCTAGC	1 cut(s)	611
NlaIII	CATG	4 cut(s)	308, 518, 611, 619
NlaIV	GGNNCC	2 cut(s)	148, 231
NspI	RCATGY	2 cut(s)	611, 619
PaeI	GCATGC	2 cut(s)	611, 619
PagI	TCATGA	1 cut(s)	514
PciSI	GCTCTTC	1 cut(s)	454
PfeI	GAWTC	2 cut(s)	394, 546
PflMI	CCANNNNNTGG	2 cut(s)	316, 352
PkrI	GCNGC	5 cut(s)	135, 160, 406, 478, 651
PleI	GAGTC	1 cut(s)	97
PpsI	GAGTC	1 cut(s)	97
PspFI	CCCAGC	1 cut(s)	488
PspN4I	GGNNCC	2 cut(s)	148, 231
PspPI	GGNCC	2 cut(s)	147, 281
PstNI	CAGNNNCTG	2 cut(s)	158, 530
PsuI	RGATCY	1 cut(s)	229
PvuII	CAGCTG	1 cut(s)	652
SapI	GCTCTTC	1 cut(s)	454
SaqAI	TTAA	1 cut(s)	399
SatI	GCNGC	5 cut(s)	134, 159, 405, 477, 650
Sau3AI	GATC	5 cut(s)	198, 229, 300, 370, 448
Sau96I	GGNCC	2 cut(s)	147, 281
SchI	GAGTC	1 cut(s)	98
SduI	GDGCHC	1 cut(s)	81
SetI	ASST	3 cut(s)	466, 509, 654
SfaNI	GCATC	1 cut(s)	463
SfcI	CTRYAG	1 cut(s)	522
SinI	GGWCC	1 cut(s)	147
SphI	GCATGC	2 cut(s)	611, 619
Sse9I	AATT	4 cut(s)	221, 429, 483, 578
SsiI	CCGC	2 cut(s)	136, 150
SspMI	CTAG	1 cut(s)	612
TaaI	ACNGT	1 cut(s)	65
TaqI	TCGA	1 cut(s)	69
TasI	AATT	4 cut(s)	221, 429, 483, 578
TfiI	GAWTC	2 cut(s)	394, 546
Tru1I	TTAA	1 cut(s)	399
Tru9I	TTAA	1 cut(s)	399
TscAI	CASTG	1 cut(s)	451
TseI	GCWGC	5 cut(s)	133, 158, 404, 476, 649
TspDTI	ATGAA	5 cut(s)	130, 153, 188, 503, 531
TspRI	CASTG	1 cut(s)	451
Van91I	CCANNNNNTGG	2 cut(s)	316, 352
VpaK11BI	GGWCC	1 cut(s)	147
XapI	RAATTY	2 cut(s)	221, 429
XceI	RCATGY	2 cut(s)	611, 619
XcmI	CCANNNNNNNNNTGG	1 cut(s)	349
XmiI	GTMKAC	1 cut(s)	414
XspI	CTAG	1 cut(s)	612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.