Rmu_co8273481.1_g000001

Signal peptide peptidase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8273481.1
Physical Location & Seq
Reverse (-)
2 .. 592
591 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8273481.1_g000001.1.cds

Sequence Viewer

Length: 223 bp
ctgggagcaatctcatacctaactttggctgtttctccattctgcatagcatttgctgttctctgggcagtttttcgcactgtttcctttgcctggatcggccaagatattcttggaattgcactgataatcacagttctgcaaattgttcgtatacccaatctcaaggtcggtacggtcctcctcagttgtgccttcttgtatgacatattttgggtgtttg

Protein Analysis

74

Amino Acids

8.19

Weight (kDa)

8.03

Isoelectric Point (pI)

27.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0029639)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr1g0355641
rosa_multiflora Rmu_co8273481.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 154
AclWI GGATC 1 cut(s) 104
AcoI YGGCCR 1 cut(s) 100
AfaI GTAC 1 cut(s) 175
AfiI CCNNNNNNNGG 2 cut(s) 25, 93
AjnI CCWGG 1 cut(s) 92
AlwI GGATC 1 cut(s) 104
AoxI GGCC 1 cut(s) 100
AspS9I GGNCC 1 cut(s) 178
AvaII GGWCC 1 cut(s) 178
BcgI CGANNNNNNTGC 2 cut(s) 131, 165
BciT130I CCWGG 1 cut(s) 94
Bme1390I CCNGG 1 cut(s) 94
Bme18I GGWCC 1 cut(s) 178
BmgT120I GGNCC 1 cut(s) 178
BmrFI CCNGG 1 cut(s) 94
BpuEI CTTGAG 1 cut(s) 149
Bsc4I CCNNNNNNNGG 2 cut(s) 25, 93
BseBI CCWGG 1 cut(s) 94
BseLI CCNNNNNNNGG 2 cut(s) 25, 93
BseMII CTCAG 1 cut(s) 199
BseRI GAGGAG 1 cut(s) 173
BshFI GGCC 1 cut(s) 102
BslI CCNNNNNNNGG 2 cut(s) 25, 93
BsnI GGCC 1 cut(s) 102
Bsp143I GATC 1 cut(s) 96
BspANI GGCC 1 cut(s) 102
BspCNI CTCAG 1 cut(s) 198
BspPI GGATC 1 cut(s) 104
BssMI GATC 1 cut(s) 96
BssNAI GTATAC 1 cut(s) 155
Bst1107I GTATAC 1 cut(s) 155
Bst2UI CCWGG 1 cut(s) 94
Bst4CI ACNGT 3 cut(s) 82, 136, 178
BstDEI CTNAG 1 cut(s) 185
BstKTI GATC 1 cut(s) 99
BstMBI GATC 1 cut(s) 96
BstNI CCWGG 1 cut(s) 94
BstSCI CCNGG 1 cut(s) 92
BstZ17I GTATAC 1 cut(s) 155
BsuRI GGCC 1 cut(s) 102
BtsIMutI CAGTG 2 cut(s) 78, 122
Cfr13I GGNCC 1 cut(s) 178
Csp6I GTAC 1 cut(s) 174
CviJI RGCY 2 cut(s) 29, 102
CviKI_1 RGCY 2 cut(s) 29, 102
CviQI GTAC 1 cut(s) 174
DdeI CTNAG 1 cut(s) 185
DpnI GATC 1 cut(s) 98
DpnII GATC 1 cut(s) 96
EaeI YGGCCR 1 cut(s) 100
Eco47I GGWCC 1 cut(s) 178
EcoRII CCWGG 1 cut(s) 92
FaiI YATR 5 cut(s) 16, 47, 155, 204, 209
FalI AAGNNNNNCTT 2 cut(s) 96, 128
FblI GTMKAC 1 cut(s) 154
HaeIII GGCC 1 cut(s) 102
Hpy166II GTNNAC 1 cut(s) 155
Hpy8I GTNNAC 1 cut(s) 155
HpyAV CCTTC 1 cut(s) 205
HpyCH4III ACNGT 3 cut(s) 82, 136, 178
HpyCH4V TGCA 3 cut(s) 45, 122, 142
HpyF3I CTNAG 1 cut(s) 185
Kzo9I GATC 1 cut(s) 96
LmnI GCTCC 1 cut(s) 5
LpnPI CCDG 3 cut(s) 49, 79, 106
MalI GATC 1 cut(s) 98
MboI GATC 1 cut(s) 96
MluCI AATT 2 cut(s) 117, 144
MnlI CCTC 2 cut(s) 191, 194
MspR9I CCNGG 1 cut(s) 94
MvaI CCWGG 1 cut(s) 94
NdeII GATC 1 cut(s) 96
Psp6I CCWGG 1 cut(s) 92
PspGI CCWGG 1 cut(s) 92
PspPI GGNCC 1 cut(s) 178
RsaI GTAC 1 cut(s) 175
RsaNI GTAC 1 cut(s) 174
Sau3AI GATC 1 cut(s) 96
Sau96I GGNCC 1 cut(s) 178
ScrFI CCNGG 1 cut(s) 94
SetI ASST 2 cut(s) 21, 171
SgeI CNNG 8 cut(s) 14, 76, 105, 106, 116, 125, 178, 211
SinI GGWCC 1 cut(s) 178
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
Sse9I AATT 2 cut(s) 117, 144
StyD4I CCNGG 1 cut(s) 92
TaaI ACNGT 3 cut(s) 82, 136, 178
TasI AATT 2 cut(s) 117, 144
TscAI CASTG 2 cut(s) 85, 129
TspRI CASTG 2 cut(s) 85, 129
VpaK11BI GGWCC 1 cut(s) 178
XcmI CCANNNNNNNNNTGG 1 cut(s) 110
XmiI GTMKAC 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.