Rmu_co8296871.1_g000001

Ethylene-overproduction protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8296871.1
Physical Location & Seq
Forward (+)
1 .. 705
705 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8296871.1_g000001.1.cds

Sequence Viewer

Length: 233 bp
ttttgatggatgaccacaaagaagcagaagctattgaagagctaagtaaggccatagctttcaagccggacctccagcttctacatcttcgagcagcattccacgaatctatgagtgattttgtgtccaccgtccgagactgtgaagcagccctctgccttgaccccaaccatgccgacactcatgaactctatggtaaagcacgggagcgcttaaatgaacaacaaaggtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

8.72

Weight (kDa)

5.04

Isoelectric Point (pI)

35.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024633)

Species Orthologous Gene IDs
pyrus_communis pycom04g14580
rosa_multiflora Rmu_co8296871.1_g000001 Rmu_sc0020622.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfeI AGCGCT 1 cut(s) 211
AgsI TTSAA 2 cut(s) 37, 63
AluBI AGCT 4 cut(s) 31, 42, 58, 78
AluI AGCT 4 cut(s) 31, 42, 58, 78
Alw26I GTCTC 1 cut(s) 131
Aor51HI AGCGCT 1 cut(s) 211
AoxI GGCC 1 cut(s) 50
ApeKI GCWGC 2 cut(s) 94, 148
AspLEI GCGC 1 cut(s) 212
AspS9I GGNCC 1 cut(s) 69
AvaII GGWCC 1 cut(s) 69
BbvI GCAGC 2 cut(s) 106, 160
BcoDI GTCTC 1 cut(s) 131
BfoI RGCGCY 1 cut(s) 213
BisI GCNGC 2 cut(s) 95, 149
BlsI GCNGC 2 cut(s) 96, 150
Bme18I GGWCC 1 cut(s) 69
BmgT120I GGNCC 1 cut(s) 69
BpmI CTGGAG 1 cut(s) 58
BseGI GGATG 1 cut(s) 15
BseXI GCAGC 2 cut(s) 106, 160
BshFI GGCC 1 cut(s) 52
BsiSI CCGG 1 cut(s) 67
BsmAI GTCTC 1 cut(s) 131
BsmI GAATGC 1 cut(s) 97
BsnI GGCC 1 cut(s) 52
BspANI GGCC 1 cut(s) 52
BspHI TCATGA 1 cut(s) 183
BspQI GCTCTTC 1 cut(s) 32
Bst4CI ACNGT 2 cut(s) 132, 142
Bst6I CTCTTC 1 cut(s) 32
BstDEI CTNAG 1 cut(s) 43
BstF5I GGATG 1 cut(s) 15
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 1 cut(s) 212
BstMAI GTCTC 1 cut(s) 131
BstV1I GCAGC 2 cut(s) 106, 160
BsuRI GGCC 1 cut(s) 52
BtsCI GGATG 1 cut(s) 15
CciI TCATGA 1 cut(s) 183
CfoI GCGC 1 cut(s) 212
Cfr13I GGNCC 1 cut(s) 69
CviAII CATG 2 cut(s) 172, 184
CviJI RGCY 7 cut(s) 31, 42, 52, 58, 66, 78, 151
CviKI_1 RGCY 7 cut(s) 31, 42, 52, 58, 66, 78, 151
DdeI CTNAG 1 cut(s) 43
Eam1104I CTCTTC 1 cut(s) 32
EarI CTCTTC 1 cut(s) 32
Eco47I GGWCC 1 cut(s) 69
Eco47III AGCGCT 1 cut(s) 211
FaeI CATG 2 cut(s) 175, 187
FaiI YATR 5 cut(s) 55, 112, 173, 185, 194
FatI CATG 2 cut(s) 171, 183
Fnu4HI GCNGC 2 cut(s) 95, 149
FokI GGATG 1 cut(s) 22
Fsp4HI GCNGC 2 cut(s) 95, 149
GlaI GCGC 1 cut(s) 211
GluI GCNGC 2 cut(s) 95, 149
GsuI CTGGAG 1 cut(s) 58
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 1 cut(s) 52
HapII CCGG 1 cut(s) 67
HhaI GCGC 1 cut(s) 212
Hin1II CATG 2 cut(s) 175, 187
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HinfI GANTC 1 cut(s) 106
HpaII CCGG 1 cut(s) 67
Hpy166II GTNNAC 1 cut(s) 128
Hpy188I TCNGA 1 cut(s) 136
Hpy188III TCNNGA 1 cut(s) 184
Hpy8I GTNNAC 1 cut(s) 128
HpyCH4III ACNGT 2 cut(s) 132, 142
HpyF3I CTNAG 1 cut(s) 43
Hsp92II CATG 2 cut(s) 175, 187
HspAI GCGC 1 cut(s) 210
LguI GCTCTTC 1 cut(s) 32
LmnI GCTCC 1 cut(s) 207
LpnPI CCDG 2 cut(s) 80, 88
Lsp1109I GCAGC 2 cut(s) 106, 160
MboII GAAGA 2 cut(s) 49, 79
MnlI CCTC 2 cut(s) 82, 163
MseI TTAA 1 cut(s) 214
MspI CCGG 1 cut(s) 67
Mva1269I GAATGC 1 cut(s) 97
NlaIII CATG 2 cut(s) 175, 187
PagI TCATGA 1 cut(s) 183
PciSI GCTCTTC 1 cut(s) 32
PctI GAATGC 1 cut(s) 97
PfeI GAWTC 1 cut(s) 106
PkrI GCNGC 2 cut(s) 96, 150
PspPI GGNCC 1 cut(s) 69
SapI GCTCTTC 1 cut(s) 32
SaqAI TTAA 1 cut(s) 214
SatI GCNGC 2 cut(s) 95, 149
Sau96I GGNCC 1 cut(s) 69
SetI ASST 6 cut(s) 33, 44, 60, 74, 80, 232
SinI GGWCC 1 cut(s) 69
TaaI ACNGT 2 cut(s) 132, 142
TaqI TCGA 1 cut(s) 90
TfiI GAWTC 1 cut(s) 106
Tru1I TTAA 1 cut(s) 214
Tru9I TTAA 1 cut(s) 214
TseI GCWGC 2 cut(s) 94, 148
TspDTI ATGAA 2 cut(s) 200, 233
VpaK11BI GGWCC 1 cut(s) 69
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.