Bifunctional 3-dehydroquinate dehydratase shikimate dehydrogenase, chloroplastic-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0118011 |
| rosa_multiflora | Rmu_co8338513.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00201630 |
| rosa_samantha | Rh2AG272100 Rh2BG284100 Rh2DG280400 Rh2DG298300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 42 |
| AcsI | RAATTY | 1 cut(s) | 64 |
| AcuI | CTGAAG | 1 cut(s) | 172 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 92 |
| AgsI | TTSAA | 1 cut(s) | 41 |
| AlwI | GGATC | 1 cut(s) | 42 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 115 |
| ApeKI | GCWGC | 2 cut(s) | 115, 225 |
| ApoI | RAATTY | 1 cut(s) | 64 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 64 |
| AspLEI | GCGC | 2 cut(s) | 85, 225 |
| BanII | GRGCYC | 1 cut(s) | 58 |
| BbvI | GCAGC | 2 cut(s) | 102, 237 |
| BclI | TGATCA | 1 cut(s) | 106 |
| BglII | AGATCT | 1 cut(s) | 202 |
| BisI | GCNGC | 2 cut(s) | 116, 226 |
| BlsI | GCNGC | 2 cut(s) | 117, 227 |
| BmiI | GGNNCC | 1 cut(s) | 55 |
| BmsI | GCATC | 1 cut(s) | 102 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 92 |
| Bse118I | RCCGGY | 1 cut(s) | 85 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 92 |
| BseMII | CTCAG | 1 cut(s) | 22 |
| BseXI | GCAGC | 2 cut(s) | 102, 237 |
| BsiSI | CCGG | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 92 |
| Bsp1286I | GDGCHC | 1 cut(s) | 58 |
| Bsp143I | GATC | 3 cut(s) | 34, 106, 202 |
| BspCNI | CTCAG | 1 cut(s) | 21 |
| BspLI | GGNNCC | 1 cut(s) | 55 |
| BspPI | GGATC | 1 cut(s) | 42 |
| BsrFI | RCCGGY | 1 cut(s) | 85 |
| BssAI | RCCGGY | 1 cut(s) | 85 |
| BssMI | GATC | 3 cut(s) | 34, 106, 202 |
| BstDEI | CTNAG | 1 cut(s) | 8 |
| BstHHI | GCGC | 2 cut(s) | 85, 225 |
| BstKTI | GATC | 3 cut(s) | 37, 109, 205 |
| BstMBI | GATC | 3 cut(s) | 34, 106, 202 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 124 |
| BstV1I | GCAGC | 2 cut(s) | 102, 237 |
| BstX2I | RGATCY | 2 cut(s) | 34, 202 |
| BstYI | RGATCY | 2 cut(s) | 34, 202 |
| CaiI | CAGNNNCTG | 1 cut(s) | 115 |
| CfoI | GCGC | 2 cut(s) | 85, 225 |
| Cfr10I | RCCGGY | 1 cut(s) | 85 |
| CseI | GACGC | 1 cut(s) | 107 |
| CviAII | CATG | 1 cut(s) | 50 |
| CviJI | RGCY | 3 cut(s) | 26, 56, 228 |
| CviKI_1 | RGCY | 3 cut(s) | 26, 56, 228 |
| DdeI | CTNAG | 1 cut(s) | 8 |
| DpnI | GATC | 3 cut(s) | 36, 108, 204 |
| DpnII | GATC | 3 cut(s) | 34, 106, 202 |
| Eco24I | GRGCYC | 1 cut(s) | 58 |
| Eco57I | CTGAAG | 1 cut(s) | 172 |
| EcoT38I | GRGCYC | 1 cut(s) | 58 |
| FaeI | CATG | 1 cut(s) | 53 |
| FaiI | YATR | 1 cut(s) | 51 |
| FatI | CATG | 1 cut(s) | 49 |
| FbaI | TGATCA | 1 cut(s) | 106 |
| Fnu4HI | GCNGC | 2 cut(s) | 116, 226 |
| FriOI | GRGCYC | 1 cut(s) | 58 |
| Fsp4HI | GCNGC | 2 cut(s) | 116, 226 |
| GlaI | GCGC | 2 cut(s) | 84, 224 |
| GluI | GCNGC | 2 cut(s) | 116, 226 |
| HapII | CCGG | 1 cut(s) | 86 |
| HgaI | GACGC | 1 cut(s) | 107 |
| HhaI | GCGC | 2 cut(s) | 85, 225 |
| Hin1II | CATG | 1 cut(s) | 53 |
| Hin6I | GCGC | 2 cut(s) | 83, 223 |
| HinP1I | GCGC | 2 cut(s) | 83, 223 |
| HinfI | GANTC | 3 cut(s) | 4, 98, 163 |
| HpaII | CCGG | 1 cut(s) | 86 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 111 |
| Hpy188III | TCNNGA | 1 cut(s) | 206 |
| Hpy99I | CGWCG | 1 cut(s) | 34 |
| HpyCH4IV | ACGT | 1 cut(s) | 29 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 124 |
| HpyF3I | CTNAG | 1 cut(s) | 8 |
| HpySE526I | ACGT | 1 cut(s) | 29 |
| Hsp92II | CATG | 1 cut(s) | 53 |
| HspAI | GCGC | 2 cut(s) | 83, 223 |
| Ksp22I | TGATCA | 1 cut(s) | 106 |
| Kzo9I | GATC | 3 cut(s) | 34, 106, 202 |
| LmnI | GCTCC | 1 cut(s) | 53 |
| LpnPI | CCDG | 3 cut(s) | 99, 116, 238 |
| Lsp1109I | GCAGC | 2 cut(s) | 102, 237 |
| LweI | GCATC | 1 cut(s) | 102 |
| MaeII | ACGT | 1 cut(s) | 29 |
| MaeIII | GTNAC | 1 cut(s) | 244 |
| MalI | GATC | 3 cut(s) | 36, 108, 204 |
| MboI | GATC | 3 cut(s) | 34, 106, 202 |
| MboII | GAAGA | 2 cut(s) | 29, 72 |
| MflI | RGATCY | 2 cut(s) | 34, 202 |
| MhlI | GDGCHC | 1 cut(s) | 58 |
| MluCI | AATT | 1 cut(s) | 64 |
| MmeI | TCCRAC | 2 cut(s) | 12, 150 |
| MroXI | GAANNNNTTC | 1 cut(s) | 64 |
| MseI | TTAA | 2 cut(s) | 180, 219 |
| MspI | CCGG | 1 cut(s) | 86 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 124 |
| NdeII | GATC | 3 cut(s) | 34, 106, 202 |
| NlaIII | CATG | 1 cut(s) | 53 |
| NlaIV | GGNNCC | 1 cut(s) | 55 |
| NmuCI | GTSAC | 1 cut(s) | 244 |
| PdmI | GAANNNNTTC | 1 cut(s) | 64 |
| PfeI | GAWTC | 2 cut(s) | 98, 163 |
| PkrI | GCNGC | 2 cut(s) | 117, 227 |
| PspN4I | GGNNCC | 1 cut(s) | 55 |
| PstNI | CAGNNNCTG | 1 cut(s) | 115 |
| PsuI | RGATCY | 2 cut(s) | 34, 202 |
| SaqAI | TTAA | 2 cut(s) | 180, 219 |
| SatI | GCNGC | 2 cut(s) | 116, 226 |
| Sau3AI | GATC | 3 cut(s) | 34, 106, 202 |
| SduI | GDGCHC | 1 cut(s) | 58 |
| SetI | ASST | 3 cut(s) | 32, 156, 257 |
| SfaNI | GCATC | 1 cut(s) | 102 |
| Sse9I | AATT | 1 cut(s) | 64 |
| TaiI | ACGT | 1 cut(s) | 32 |
| TaqI | TCGA | 2 cut(s) | 68, 207 |
| TasI | AATT | 1 cut(s) | 64 |
| TfiI | GAWTC | 2 cut(s) | 98, 163 |
| Tru1I | TTAA | 2 cut(s) | 180, 219 |
| Tru9I | TTAA | 2 cut(s) | 180, 219 |
| TseFI | GTSAC | 1 cut(s) | 244 |
| TseI | GCWGC | 2 cut(s) | 115, 225 |
| Tsp45I | GTSAC | 1 cut(s) | 244 |
| TspGWI | ACGGA | 1 cut(s) | 9 |
| XapI | RAATTY | 1 cut(s) | 64 |
| XmnI | GAANNNNTTC | 1 cut(s) | 64 |