Rmu_co8411791.1_g000001

Receptor protein kinase-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8411791.1
OG0031126
Physical Location & Seq
Reverse (-)
2 .. 1312
1311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8411791.1_g000001.1.cds

Sequence Viewer

Length: 1311 bp
atgacctacttgtatctccatcaaaatcagctttctggtgccattcctgcagagataggaaatctatctagtttgatccacctggtcatgtatgacaaccatttgataggtcccatccctccaagttttggaaacttgaagaacttagttttactgttcttgcgattgaatcaactgtctggcctaattcccagcgagattgggaatctgaaatccattcagatgctgtcattcaatgagaacaatttaacaggtccaatacctccaagtgtaggaaacttaagagggctaaccatattgaacctgttcaacaatcatctttctggcctcattcccagtgagatagggaatataaaatcccttcaggtgctggtgttgagtgacaactatttaacaggtccaataccgccaagtgttggaaacttaagagggctaaccacattgttcatggacaacaatcaactttctggatctataccctcagaaataggaaatttgaagtctctagagaaattaagcttttctagtaacactcttcgatattggtatacagatagacttgctagttttcatctgaaagagaaagggaatgtgaaactatccttggcaatgaatcagctcaatggtaatctgagagaccttaaccctataaataagctttcaggaactatacctagagagatagggcacttgagatctcttgtatacctagatttgtctggtcatcgactccatggttcaattccaatatcatttggtgatctgacaaatcttacctttctcgatctctctggaaataagctttctggtactattcctaaagagatagggaacttgaaatctcttctcattctagacttcgtccataatcaactaaatggctcaatcccaacatccttaagtaatgtgaggaatcttgaaattctccgtctatcttcaaataagctttcttgcactattcccaaagaggtaggccacttgaaatccctcacgactgtggaattaaacttcaatcaacttagtggttccattcccacttcatttggtgacctgagcagcttaaaaatcttaaacctcatgagcaaccaactctctggctcaatccctcaagaaataggaattctcaagaacttaagtgaactacaactgggtgataatcagtttgttggttacttaccccaaaacctttgccaaggtggatctcttagcaatttttctgtaaccaataactatttgattggtccaatccccaaaagcttgaaaaattgtacgagcttaatcagactccgtcttgatgggaaccaattggaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

437

Amino Acids

47.71

Weight (kDa)

8.99

Isoelectric Point (pI)

24.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0031126)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8411791.1_g000001 Rmu_sc0001371.1_g000015

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 38
AccB7I CCANNNNNTGG 2 cut(s) 128, 416
AccI GTMKAC 2 cut(s) 548, 705
AciI CCGC 1 cut(s) 407
AclWI GGATC 3 cut(s) 70, 478, 1207
AcsI RAATTY 3 cut(s) 493, 921, 1119
AcuI CTGAAG 1 cut(s) 347
AfaI GTAC 2 cut(s) 811, 1270
AfiI CCNNNNNNNGG 3 cut(s) 128, 272, 416
AflII CTTAAG 4 cut(s) 280, 424, 898, 1132
AjnI CCWGG 1 cut(s) 81
AjuI GAANNNNNNNTTGG 2 cut(s) 587, 619
AleI CACNNNNGTG 1 cut(s) 995
AluBI AGCT 9 cut(s) 31, 519, 619, 658, 802, 946, 1059, 1257, 1275
AluI AGCT 9 cut(s) 31, 519, 619, 658, 802, 946, 1059, 1257, 1275
Alw26I GTCTC 2 cut(s) 507, 630
AlwI GGATC 3 cut(s) 70, 478, 1207
AlwNI CAGNNNCTG 2 cut(s) 226, 370
AoxI GGCC 3 cut(s) 181, 325, 973
ApeKI GCWGC 1 cut(s) 1056
ApoI RAATTY 3 cut(s) 493, 921, 1119
Asp700I GAANNNNTTC 1 cut(s) 305
AspS9I GGNCC 4 cut(s) 110, 254, 398, 1241
AsuHPI GGTGA 3 cut(s) 770, 1058, 1163
AvaII GGWCC 4 cut(s) 110, 254, 398, 1241
BaeGI GKGCMC 1 cut(s) 690
BanI GGYRCC 1 cut(s) 38
BbvI GCAGC 1 cut(s) 1068
BccI CCATC 3 cut(s) 27, 122, 1289
BciT130I CCWGG 1 cut(s) 83
BcoDI GTCTC 2 cut(s) 507, 630
BfaI CTAG 7 cut(s) 69, 506, 525, 564, 675, 710, 854
BfmI CTRYAG 1 cut(s) 48
BfrI CTTAAG 4 cut(s) 280, 424, 898, 1132
BglII AGATCT 1 cut(s) 695
BisI GCNGC 1 cut(s) 1057
BlsI GCNGC 1 cut(s) 1058
Bme1390I CCNGG 1 cut(s) 83
Bme18I GGWCC 4 cut(s) 110, 254, 398, 1241
BmgT120I GGNCC 4 cut(s) 110, 254, 398, 1241
BmiI GGNNCC 4 cut(s) 40, 112, 1027, 1301
BmrFI CCNGG 1 cut(s) 83
BmrI ACTGGG 2 cut(s) 330, 1157
BmsI GCATC 1 cut(s) 213
BmuI ACTGGG 2 cut(s) 330, 1157
Bpu10I CCTNAGC 1 cut(s) 1052
BpuEI CTTGAG 3 cut(s) 712, 1092, 1109
BsaI GGTCTC 1 cut(s) 630
BsaJI CCNNGG 3 cut(s) 603, 733, 1192
Bsc4I CCNNNNNNNGG 3 cut(s) 128, 272, 416
Bse1I ACTGG 2 cut(s) 336, 1152
Bse3DI GCAATG 1 cut(s) 615
BseBI CCWGG 1 cut(s) 83
BseDI CCNNGG 3 cut(s) 603, 733, 1192
BseGI GGATG 2 cut(s) 114, 893
BseLI CCNNNNNNNGG 3 cut(s) 128, 272, 416
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 3 cut(s) 495, 623, 1043
BseNI ACTGG 2 cut(s) 336, 1152
BseSI GKGCMC 1 cut(s) 690
BseXI GCAGC 1 cut(s) 1068
BseYI CCCAGC 1 cut(s) 191
BshFI GGCC 3 cut(s) 183, 327, 975
BshNI GGYRCC 1 cut(s) 38
BslFI GGGAC 1 cut(s) 96
BslI CCNNNNNNNGG 3 cut(s) 128, 272, 416
BsmAI GTCTC 2 cut(s) 507, 630
BsmFI GGGAC 1 cut(s) 96
BsnI GGCC 3 cut(s) 183, 327, 975
Bso31I GGTCTC 1 cut(s) 630
Bsp1286I GDGCHC 1 cut(s) 690
Bsp143I GATC 6 cut(s) 75, 470, 695, 760, 784, 1199
Bsp19I CCATGG 1 cut(s) 733
BspACI CCGC 1 cut(s) 407
BspANI GGCC 3 cut(s) 183, 327, 975
BspCNI CTCAG 3 cut(s) 494, 624, 1044
BspHI TCATGA 1 cut(s) 1077
BspLI GGNNCC 4 cut(s) 40, 112, 1027, 1301
BspMAI CTGCAG 1 cut(s) 52
BspPI GGATC 3 cut(s) 70, 478, 1207
BspT107I GGYRCC 1 cut(s) 38
BspTI CTTAAG 4 cut(s) 280, 424, 898, 1132
BspTNI GGTCTC 1 cut(s) 630
BsrDI GCAATG 1 cut(s) 615
BsrI ACTGG 2 cut(s) 336, 1152
BssECI CCNNGG 3 cut(s) 603, 733, 1192
BssMI GATC 6 cut(s) 75, 470, 695, 760, 784, 1199
BssNAI GTATAC 2 cut(s) 549, 706
BssT1I CCWWGG 3 cut(s) 603, 733, 1192
Bst1107I GTATAC 2 cut(s) 549, 706
Bst2UI CCWGG 1 cut(s) 83
Bst4CI ACNGT 3 cut(s) 156, 177, 997
Bst6I CTCTTC 2 cut(s) 540, 849
BstAFI CTTAAG 4 cut(s) 280, 424, 898, 1132
BstDEI CTNAG 6 cut(s) 145, 481, 632, 1019, 1052, 1205
BstDSI CCRYGG 1 cut(s) 733
BstEII GGTNACC 1 cut(s) 1046
BstF5I GGATG 2 cut(s) 114, 893
BstKTI GATC 6 cut(s) 78, 473, 698, 763, 787, 1202
BstMAI GTCTC 2 cut(s) 507, 630
BstMBI GATC 6 cut(s) 75, 470, 695, 760, 784, 1199
BstMWI GCNNNNNNNGC 1 cut(s) 47
BstNI CCWGG 1 cut(s) 83
BstPI GGTNACC 1 cut(s) 1046
BstSCI CCNGG 1 cut(s) 81
BstSFI CTRYAG 1 cut(s) 48
BstSLI GKGCMC 1 cut(s) 690
BstV1I GCAGC 1 cut(s) 1068
BstX2I RGATCY 3 cut(s) 470, 695, 1199
BstXI CCANNNNNNTGG 1 cut(s) 1094
BstYI RGATCY 3 cut(s) 470, 695, 1199
BstZ17I GTATAC 2 cut(s) 549, 706
BsuRI GGCC 3 cut(s) 183, 327, 975
BtgI CCRYGG 1 cut(s) 733
BtsCI GGATG 2 cut(s) 114, 893
BtsIMutI CAGTG 1 cut(s) 343
CaiI CAGNNNCTG 2 cut(s) 226, 370
CciI TCATGA 1 cut(s) 1077
Cfr13I GGNCC 4 cut(s) 110, 254, 398, 1241
CsiI ACCWGGT 1 cut(s) 81
Csp6I GTAC 2 cut(s) 810, 1269
CspCI CAANNNNNGTGG 2 cut(s) 1024, 1059
CviAII CATG 4 cut(s) 88, 448, 734, 1078
CviQI GTAC 2 cut(s) 810, 1269
DdeI CTNAG 6 cut(s) 145, 481, 632, 1019, 1052, 1205
DpnI GATC 6 cut(s) 77, 472, 697, 762, 786, 1201
DpnII GATC 6 cut(s) 75, 470, 695, 760, 784, 1199
Eam1104I CTCTTC 2 cut(s) 540, 849
EarI CTCTTC 2 cut(s) 540, 849
Eco130I CCWWGG 3 cut(s) 603, 733, 1192
Eco31I GGTCTC 1 cut(s) 630
Eco47I GGWCC 4 cut(s) 110, 254, 398, 1241
Eco57I CTGAAG 1 cut(s) 347
Eco91I GGTNACC 1 cut(s) 1046
EcoO109I RGGNCCY 1 cut(s) 110
EcoO65I GGTNACC 1 cut(s) 1046
EcoRI GAATTC 1 cut(s) 1119
EcoRII CCWGG 1 cut(s) 81
EcoT14I CCWWGG 3 cut(s) 603, 733, 1192
ErhI CCWWGG 3 cut(s) 603, 733, 1192
FaeI CATG 4 cut(s) 91, 451, 737, 1081
FaqI GGGAC 1 cut(s) 96
FatI CATG 4 cut(s) 87, 447, 733, 1077
FblI GTMKAC 2 cut(s) 548, 705
Fnu4HI GCNGC 1 cut(s) 1057
FokI GGATG 2 cut(s) 101, 880
Fsp4HI GCNGC 1 cut(s) 1057
FspBI CTAG 7 cut(s) 69, 506, 525, 564, 675, 710, 854
GluI GCNGC 1 cut(s) 1057
GsaI CCCAGC 1 cut(s) 195
HaeIII GGCC 3 cut(s) 183, 327, 975
Hin1II CATG 4 cut(s) 91, 451, 737, 1081
HindIII AAGCTT 5 cut(s) 517, 656, 800, 944, 1255
HinfI GANTC 6 cut(s) 169, 205, 613, 729, 913, 1284
HphI GGTGA 3 cut(s) 770, 1058, 1163
Hpy166II GTNNAC 3 cut(s) 549, 706, 1139
Hpy188I TCNGA 7 cut(s) 210, 222, 484, 576, 633, 765, 1283
Hpy8I GTNNAC 3 cut(s) 549, 706, 1139
HpyAV CCTTC 1 cut(s) 371
HpyCH4III ACNGT 3 cut(s) 156, 177, 997
HpyCH4V TGCA 2 cut(s) 50, 954
HpyF10VI GCNNNNNNNGC 1 cut(s) 47
HpyF3I CTNAG 6 cut(s) 145, 481, 632, 1019, 1052, 1205
Hsp92II CATG 4 cut(s) 91, 451, 737, 1081
Kzo9I GATC 6 cut(s) 75, 470, 695, 760, 784, 1199
Lsp1109I GCAGC 1 cut(s) 1068
LweI GCATC 1 cut(s) 213
MabI ACCWGGT 1 cut(s) 81
MaeI CTAG 7 cut(s) 69, 506, 525, 564, 675, 710, 854
MaeIII GTNAC 5 cut(s) 380, 527, 1046, 1169, 1219
MalI GATC 6 cut(s) 77, 472, 697, 762, 786, 1201
MboI GATC 6 cut(s) 75, 470, 695, 760, 784, 1199
MboII GAAGA 4 cut(s) 151, 527, 836, 927
MfeI CAATTG 1 cut(s) 1304
MflI RGATCY 3 cut(s) 470, 695, 1199
MhlI GDGCHC 1 cut(s) 690
MlyI GAGTC 2 cut(s) 723, 1278
MmeI TCCRAC 1 cut(s) 397
MroXI GAANNNNTTC 1 cut(s) 305
MslI CAYNNNNRTG 2 cut(s) 221, 995
MspCI CTTAAG 4 cut(s) 280, 424, 898, 1132
MspR9I CCNGG 1 cut(s) 83
MunI CAATTG 1 cut(s) 1304
MvaI CCWGG 1 cut(s) 83
MwoI GCNNNNNNNGC 1 cut(s) 47
NcoI CCATGG 1 cut(s) 733
NdeII GATC 6 cut(s) 75, 470, 695, 760, 784, 1199
NlaIII CATG 4 cut(s) 91, 451, 737, 1081
NlaIV GGNNCC 4 cut(s) 40, 112, 1027, 1301
NmuCI GTSAC 2 cut(s) 380, 1046
OliI CACNNNNGTG 1 cut(s) 995
PagI TCATGA 1 cut(s) 1077
PdmI GAANNNNTTC 1 cut(s) 305
PfeI GAWTC 4 cut(s) 169, 205, 613, 913
PflFI GACNNNGTC 2 cut(s) 860, 1287
PflMI CCANNNNNTGG 2 cut(s) 128, 416
PkrI GCNGC 1 cut(s) 1058
PleI GAGTC 2 cut(s) 723, 1278
PpsI GAGTC 2 cut(s) 723, 1278
PpuMI RGGWCCY 1 cut(s) 110
Psp5II RGGWCCY 1 cut(s) 110
Psp6I CCWGG 1 cut(s) 81
PspEI GGTNACC 1 cut(s) 1046
PspFI CCCAGC 1 cut(s) 191
PspGI CCWGG 1 cut(s) 81
PspN4I GGNNCC 4 cut(s) 40, 112, 1027, 1301
PspPI GGNCC 4 cut(s) 110, 254, 398, 1241
PspPPI RGGWCCY 1 cut(s) 110
PstI CTGCAG 1 cut(s) 52
PstNI CAGNNNCTG 2 cut(s) 226, 370
PsuI RGATCY 3 cut(s) 470, 695, 1199
PsyI GACNNNGTC 2 cut(s) 860, 1287
RsaI GTAC 2 cut(s) 811, 1270
RsaNI GTAC 2 cut(s) 810, 1269
RseI CAYNNNNRTG 2 cut(s) 221, 995
SatI GCNGC 1 cut(s) 1057
Sau3AI GATC 6 cut(s) 75, 470, 695, 760, 784, 1199
Sau96I GGNCC 4 cut(s) 110, 254, 398, 1241
SchI GAGTC 2 cut(s) 723, 1278
ScrFI CCNGG 1 cut(s) 83
SduI GDGCHC 1 cut(s) 690
SexAI ACCWGGT 1 cut(s) 81
SfaNI GCATC 1 cut(s) 213
SfcI CTRYAG 1 cut(s) 48
SinI GGWCC 4 cut(s) 110, 254, 398, 1241
SmiMI CAYNNNNRTG 2 cut(s) 221, 995
SmlI CTYRAG 7 cut(s) 280, 424, 691, 898, 1107, 1124, 1132
SmoI CTYRAG 7 cut(s) 280, 424, 691, 898, 1107, 1124, 1132
SsiI CCGC 1 cut(s) 407
SspMI CTAG 7 cut(s) 69, 506, 525, 564, 675, 710, 854
StyD4I CCNGG 1 cut(s) 81
StyI CCWWGG 3 cut(s) 603, 733, 1192
TaaI ACNGT 3 cut(s) 156, 177, 997
TaqI TCGA 3 cut(s) 538, 727, 783
TfiI GAWTC 4 cut(s) 169, 205, 613, 913
TscAI CASTG 1 cut(s) 343
TseFI GTSAC 2 cut(s) 380, 1046
TseI GCWGC 1 cut(s) 1056
Tsp45I GTSAC 2 cut(s) 380, 1046
TspDTI ATGAA 4 cut(s) 436, 560, 626, 1029
TspGWI ACGGA 2 cut(s) 917, 1277
TspRI CASTG 1 cut(s) 343
Tth111I GACNNNGTC 2 cut(s) 860, 1287
Van91I CCANNNNNTGG 2 cut(s) 128, 416
Vha464I CTTAAG 4 cut(s) 280, 424, 898, 1132
VpaK11BI GGWCC 4 cut(s) 110, 254, 398, 1241
XapI RAATTY 3 cut(s) 493, 921, 1119
XbaI TCTAGA 2 cut(s) 505, 853
XcmI CCANNNNNNNNNTGG 1 cut(s) 445
XmiI GTMKAC 2 cut(s) 548, 705
XmnI GAANNNNTTC 1 cut(s) 305
XspI CTAG 7 cut(s) 69, 506, 525, 564, 675, 710, 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.