ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000071.1_g000006 Rmu_sc0031735.1_g000003 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 473 |
| AclWI | GGATC | 2 cut(s) | 329, 372 |
| AcuI | CTGAAG | 1 cut(s) | 126 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 472 |
| AgsI | TTSAA | 1 cut(s) | 13 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 343, 375 |
| AluBI | AGCT | 1 cut(s) | 122 |
| AluI | AGCT | 1 cut(s) | 122 |
| Alw26I | GTCTC | 2 cut(s) | 89, 411 |
| AlwI | GGATC | 2 cut(s) | 329, 372 |
| AoxI | GGCC | 1 cut(s) | 457 |
| ApeKI | GCWGC | 1 cut(s) | 122 |
| AspS9I | GGNCC | 1 cut(s) | 458 |
| AsuC2I | CCSGG | 1 cut(s) | 466 |
| AsuHPI | GGTGA | 1 cut(s) | 250 |
| BbvI | GCAGC | 1 cut(s) | 109 |
| BccI | CCATC | 1 cut(s) | 161 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 432, 466 |
| BcnI | CCSGG | 1 cut(s) | 466 |
| BcoDI | GTCTC | 2 cut(s) | 89, 411 |
| BfaI | CTAG | 3 cut(s) | 96, 119, 128 |
| BglII | AGATCT | 1 cut(s) | 130 |
| BisI | GCNGC | 2 cut(s) | 123, 474 |
| BlsI | GCNGC | 2 cut(s) | 124, 475 |
| Bme1390I | CCNGG | 1 cut(s) | 466 |
| BmgT120I | GGNCC | 1 cut(s) | 458 |
| BmrFI | CCNGG | 1 cut(s) | 466 |
| BmsI | GCATC | 2 cut(s) | 52, 262 |
| BpmI | CTGGAG | 1 cut(s) | 435 |
| BpuMI | CCSGG | 1 cut(s) | 466 |
| BsaJI | CCNNGG | 3 cut(s) | 189, 401, 464 |
| BsaWI | WCCGGW | 1 cut(s) | 235 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 472 |
| BseDI | CCNNGG | 3 cut(s) | 189, 401, 464 |
| BseGI | GGATG | 1 cut(s) | 199 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 472 |
| BseXI | GCAGC | 1 cut(s) | 109 |
| BshFI | GGCC | 1 cut(s) | 459 |
| BsiSI | CCGG | 2 cut(s) | 236, 466 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 472 |
| BsmAI | GTCTC | 2 cut(s) | 89, 411 |
| BsmBI | CGTCTC | 1 cut(s) | 89 |
| BsnI | GGCC | 1 cut(s) | 459 |
| Bsp143I | GATC | 3 cut(s) | 130, 321, 364 |
| BspACI | CCGC | 1 cut(s) | 473 |
| BspANI | GGCC | 1 cut(s) | 459 |
| BspPI | GGATC | 2 cut(s) | 329, 372 |
| BssECI | CCNNGG | 3 cut(s) | 189, 401, 464 |
| BssMI | GATC | 3 cut(s) | 130, 321, 364 |
| BssT1I | CCWWGG | 2 cut(s) | 189, 401 |
| BstDEI | CTNAG | 1 cut(s) | 245 |
| BstF5I | GGATG | 1 cut(s) | 199 |
| BstKTI | GATC | 3 cut(s) | 133, 324, 367 |
| BstMAI | GTCTC | 2 cut(s) | 89, 411 |
| BstMBI | GATC | 3 cut(s) | 130, 321, 364 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 122 |
| BstSCI | CCNGG | 1 cut(s) | 464 |
| BstV1I | GCAGC | 1 cut(s) | 109 |
| BstX2I | RGATCY | 3 cut(s) | 130, 321, 364 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 219 |
| BstYI | RGATCY | 3 cut(s) | 130, 321, 364 |
| BsuRI | GGCC | 1 cut(s) | 459 |
| BtsCI | GGATG | 1 cut(s) | 199 |
| BtsIMutI | CAGTG | 1 cut(s) | 155 |
| Cfr13I | GGNCC | 1 cut(s) | 458 |
| CseI | GACGC | 1 cut(s) | 71 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 436, 471 |
| CviJI | RGCY | 6 cut(s) | 116, 122, 223, 244, 294, 459 |
| CviKI_1 | RGCY | 6 cut(s) | 116, 122, 223, 244, 294, 459 |
| DdeI | CTNAG | 1 cut(s) | 245 |
| DpnI | GATC | 3 cut(s) | 132, 323, 366 |
| DpnII | GATC | 3 cut(s) | 130, 321, 364 |
| Eco130I | CCWWGG | 2 cut(s) | 189, 401 |
| Eco57I | CTGAAG | 1 cut(s) | 126 |
| EcoT14I | CCWWGG | 2 cut(s) | 189, 401 |
| ErhI | CCWWGG | 2 cut(s) | 189, 401 |
| Esp3I | CGTCTC | 1 cut(s) | 89 |
| FaiI | YATR | 4 cut(s) | 201, 267, 327, 478 |
| Fnu4HI | GCNGC | 2 cut(s) | 123, 474 |
| FokI | GGATG | 1 cut(s) | 206 |
| Fsp4HI | GCNGC | 2 cut(s) | 123, 474 |
| FspBI | CTAG | 3 cut(s) | 96, 119, 128 |
| GluI | GCNGC | 2 cut(s) | 123, 474 |
| GsuI | CTGGAG | 1 cut(s) | 435 |
| HaeIII | GGCC | 1 cut(s) | 459 |
| HapII | CCGG | 2 cut(s) | 236, 466 |
| HgaI | GACGC | 1 cut(s) | 71 |
| HincII | GTYRAC | 1 cut(s) | 138 |
| HindII | GTYRAC | 1 cut(s) | 138 |
| HinfI | GANTC | 2 cut(s) | 185, 351 |
| HpaII | CCGG | 2 cut(s) | 236, 466 |
| HphI | GGTGA | 1 cut(s) | 250 |
| Hpy166II | GTNNAC | 1 cut(s) | 138 |
| Hpy188III | TCNNGA | 2 cut(s) | 13, 128 |
| Hpy8I | GTNNAC | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 1 cut(s) | 275 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 1 cut(s) | 245 |
| Kzo9I | GATC | 3 cut(s) | 130, 321, 364 |
| LpnPI | CCDG | 4 cut(s) | 65, 249, 355, 399 |
| Lsp1109I | GCAGC | 1 cut(s) | 109 |
| LweI | GCATC | 2 cut(s) | 52, 262 |
| MaeI | CTAG | 3 cut(s) | 96, 119, 128 |
| MaeIII | GTNAC | 1 cut(s) | 369 |
| MalI | GATC | 3 cut(s) | 132, 323, 366 |
| MboI | GATC | 3 cut(s) | 130, 321, 364 |
| MboII | GAAGA | 1 cut(s) | 346 |
| MflI | RGATCY | 3 cut(s) | 130, 321, 364 |
| MluCI | AATT | 3 cut(s) | 28, 154, 250 |
| MmeI | TCCRAC | 1 cut(s) | 262 |
| MnlI | CCTC | 5 cut(s) | 197, 234, 278, 387, 471 |
| MseI | TTAA | 3 cut(s) | 42, 77, 423 |
| MslI | CAYNNNNRTG | 1 cut(s) | 270 |
| MspI | CCGG | 2 cut(s) | 236, 466 |
| MspR9I | CCNGG | 1 cut(s) | 466 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 122 |
| NciI | CCSGG | 1 cut(s) | 466 |
| NdeII | GATC | 3 cut(s) | 130, 321, 364 |
| PfeI | GAWTC | 2 cut(s) | 185, 351 |
| PkrI | GCNGC | 2 cut(s) | 124, 475 |
| PspPI | GGNCC | 1 cut(s) | 458 |
| PsuI | RGATCY | 3 cut(s) | 130, 321, 364 |
| RseI | CAYNNNNRTG | 1 cut(s) | 270 |
| SaqAI | TTAA | 3 cut(s) | 42, 77, 423 |
| SatI | GCNGC | 2 cut(s) | 123, 474 |
| Sau3AI | GATC | 3 cut(s) | 130, 321, 364 |
| Sau96I | GGNCC | 1 cut(s) | 458 |
| ScrFI | CCNGG | 1 cut(s) | 466 |
| SetI | ASST | 4 cut(s) | 40, 124, 208, 306 |
| SfaNI | GCATC | 2 cut(s) | 52, 262 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 270 |
| Sse9I | AATT | 3 cut(s) | 28, 154, 250 |
| SsiI | CCGC | 1 cut(s) | 473 |
| SspMI | CTAG | 3 cut(s) | 96, 119, 128 |
| StyD4I | CCNGG | 1 cut(s) | 464 |
| StyI | CCWWGG | 2 cut(s) | 189, 401 |
| TaqI | TCGA | 1 cut(s) | 385 |
| TasI | AATT | 3 cut(s) | 28, 154, 250 |
| TauI | GCSGC | 1 cut(s) | 476 |
| TfiI | GAWTC | 2 cut(s) | 185, 351 |
| Tru1I | TTAA | 3 cut(s) | 42, 77, 423 |
| Tru9I | TTAA | 3 cut(s) | 42, 77, 423 |
| TscAI | CASTG | 1 cut(s) | 155 |
| TseI | GCWGC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 2 cut(s) | 243, 441 |
| TspRI | CASTG | 1 cut(s) | 155 |
| XbaI | TCTAGA | 1 cut(s) | 127 |
| XspI | CTAG | 3 cut(s) | 96, 119, 128 |