Rmu_sc0000115.1_g000019

Methyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000115.1
Physical Location & Seq
Reverse (-)
96812 .. 97192
381 bp
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UTR
Exon/CDS
Intron
Rmu_sc0000115.1_g000019.1.cds

Sequence Viewer

Length: 381 bp
atgtggaagccgatgaagaggtgccaatggtttctaggcagtatttttggactggaagatggtgagcaccacaaagtttgtgttggagataaacttgttgttgcttgtgaggtagaaaatggtagtgacatgggtagtggcaatgacgttcatactaaatttgatgtgattatggttgatttggattcaattgatgctagggatggtctaattactccgccattggagtttgtttggaagcattttcttgtgtctattatatcagttctttgtgataatgaaatcattgctataagtgtcattcctccaaatacatcattttgcaggacattgattgtcacgccccaaatttcgaataaaaaattcaaatccgaaatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

126

Amino Acids

14.12

Weight (kDa)

5.23

Isoelectric Point (pI)

18.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031039)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0000115.1_g000019
rosa_roxburghii Rroxscaffold_4G00315080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 21
AciI CCGC 1 cut(s) 218
AcsI RAATTY 3 cut(s) 158, 348, 362
AgsI TTSAA 2 cut(s) 189, 367
Alw21I GWGCWC 1 cut(s) 69
ApoI RAATTY 3 cut(s) 158, 348, 362
AsuHPI GGTGA 1 cut(s) 74
AsuII TTCGAA 1 cut(s) 353
BanI GGYRCC 1 cut(s) 21
Bbv12I GWGCWC 1 cut(s) 69
BccI CCATC 2 cut(s) 53, 197
BfaI CTAG 2 cut(s) 35, 198
BmiI GGNNCC 1 cut(s) 23
BmsI GCATC 1 cut(s) 184
Bpu14I TTCGAA 1 cut(s) 353
Bse1I ACTGG 1 cut(s) 57
Bse3DI GCAATG 2 cut(s) 148, 285
BseGI GGATG 1 cut(s) 208
BseMI GCAATG 2 cut(s) 148, 285
BseNI ACTGG 1 cut(s) 57
BshNI GGYRCC 1 cut(s) 21
BsiHKAI GWGCWC 1 cut(s) 69
Bsp119I TTCGAA 1 cut(s) 353
Bsp1286I GDGCHC 1 cut(s) 69
BspACI CCGC 1 cut(s) 218
BspLI GGNNCC 1 cut(s) 23
BspT104I TTCGAA 1 cut(s) 353
BspT107I GGYRCC 1 cut(s) 21
BsrDI GCAATG 2 cut(s) 148, 285
BsrI ACTGG 1 cut(s) 57
Bst6I CTCTTC 1 cut(s) 11
BstBI TTCGAA 1 cut(s) 353
BstF5I GGATG 1 cut(s) 208
BtsCI GGATG 1 cut(s) 208
CspCI CAANNNNNGTGG 2 cut(s) 59, 94
CviAII CATG 1 cut(s) 130
CviJI RGCY 1 cut(s) 10
CviKI_1 RGCY 1 cut(s) 10
Eam1104I CTCTTC 1 cut(s) 11
EarI CTCTTC 1 cut(s) 11
EciI GGCGGA 1 cut(s) 207
FaeI CATG 1 cut(s) 133
FaiI YATR 5 cut(s) 131, 153, 173, 260, 293
FatI CATG 1 cut(s) 129
FokI GGATG 1 cut(s) 215
FspBI CTAG 2 cut(s) 35, 198
Hin1II CATG 1 cut(s) 133
HinfI GANTC 1 cut(s) 185
HphI GGTGA 1 cut(s) 74
Hpy188I TCNGA 1 cut(s) 373
HpyCH4IV ACGT 1 cut(s) 147
HpyCH4V TGCA 1 cut(s) 324
HpySE526I ACGT 1 cut(s) 147
Hsp92II CATG 1 cut(s) 133
LpnPI CCDG 2 cut(s) 38, 310
LweI GCATC 1 cut(s) 184
MaeI CTAG 2 cut(s) 35, 198
MaeII ACGT 1 cut(s) 147
MaeIII GTNAC 2 cut(s) 125, 337
MboII GAAGA 2 cut(s) 28, 68
MfeI CAATTG 1 cut(s) 189
MhlI GDGCHC 1 cut(s) 69
MluCI AATT 5 cut(s) 158, 189, 210, 348, 362
MmeI TCCRAC 1 cut(s) 64
MnlI CCTC 3 cut(s) 12, 103, 315
MunI CAATTG 1 cut(s) 189
NlaIII CATG 1 cut(s) 133
NlaIV GGNNCC 1 cut(s) 23
NmuCI GTSAC 2 cut(s) 125, 337
NspV TTCGAA 1 cut(s) 353
PfeI GAWTC 1 cut(s) 185
PspN4I GGNNCC 1 cut(s) 23
SduI GDGCHC 1 cut(s) 69
SetI ASST 3 cut(s) 23, 114, 150
SfaNI GCATC 1 cut(s) 184
SfuI TTCGAA 1 cut(s) 353
SgeI CNNG 9 cut(s) 47, 65, 107, 117, 142, 210, 260, 337, 352
Sse9I AATT 5 cut(s) 158, 189, 210, 348, 362
SsiI CCGC 1 cut(s) 218
SspMI CTAG 2 cut(s) 35, 198
TaiI ACGT 1 cut(s) 150
TaqI TCGA 1 cut(s) 353
TasI AATT 5 cut(s) 158, 189, 210, 348, 362
TfiI GAWTC 1 cut(s) 185
TseFI GTSAC 2 cut(s) 125, 337
Tsp45I GTSAC 2 cut(s) 125, 337
TspDTI ATGAA 3 cut(s) 29, 140, 294
XapI RAATTY 3 cut(s) 158, 348, 362
XspI CTAG 2 cut(s) 35, 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.