GTPase activator activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0198671 |
| rosa_laevigata | RLG00000003849 |
| rosa_multiflora | Rmu_sc0000220.1_g000016 |
| rosa_roxburghii | Rroxscaffold_3G00257540 |
| rosa_rugosa | Rorug07G0049100 |
| rosa_samantha | Rh7BG176200 Rh7CG182100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 284 |
| AclWI | GGATC | 2 cut(s) | 122, 224 |
| AcsI | RAATTY | 2 cut(s) | 9, 146 |
| AgsI | TTSAA | 2 cut(s) | 8, 252 |
| AjnI | CCWGG | 1 cut(s) | 232 |
| AluBI | AGCT | 2 cut(s) | 78, 164 |
| AluI | AGCT | 2 cut(s) | 78, 164 |
| Alw26I | GTCTC | 1 cut(s) | 263 |
| AlwI | GGATC | 2 cut(s) | 122, 224 |
| ApoI | RAATTY | 2 cut(s) | 9, 146 |
| AsuC2I | CCSGG | 1 cut(s) | 54 |
| AsuHPI | GGTGA | 1 cut(s) | 148 |
| BciT130I | CCWGG | 1 cut(s) | 234 |
| BcnI | CCSGG | 1 cut(s) | 54 |
| BcoDI | GTCTC | 1 cut(s) | 263 |
| Bme1390I | CCNGG | 2 cut(s) | 54, 234 |
| BmrFI | CCNGG | 2 cut(s) | 54, 234 |
| BmsI | GCATC | 1 cut(s) | 78 |
| BpuEI | CTTGAG | 2 cut(s) | 170, 287 |
| BpuMI | CCSGG | 1 cut(s) | 54 |
| BsaBI | GATNNNNATC | 1 cut(s) | 228 |
| BsaJI | CCNNGG | 1 cut(s) | 351 |
| Bse8I | GATNNNNATC | 1 cut(s) | 228 |
| BseBI | CCWGG | 1 cut(s) | 234 |
| BseDI | CCNNGG | 1 cut(s) | 351 |
| BseGI | GGATG | 1 cut(s) | 214 |
| BseJI | GATNNNNATC | 1 cut(s) | 228 |
| BseRI | GAGGAG | 2 cut(s) | 104, 383 |
| BsiSI | CCGG | 1 cut(s) | 53 |
| BslFI | GGGAC | 1 cut(s) | 310 |
| BsmAI | GTCTC | 1 cut(s) | 263 |
| BsmBI | CGTCTC | 1 cut(s) | 263 |
| BsmFI | GGGAC | 1 cut(s) | 310 |
| Bsp143I | GATC | 4 cut(s) | 127, 181, 229, 397 |
| Bsp19I | CCATGG | 1 cut(s) | 351 |
| BspACI | CCGC | 1 cut(s) | 284 |
| BspPI | GGATC | 2 cut(s) | 122, 224 |
| BssECI | CCNNGG | 1 cut(s) | 351 |
| BssMI | GATC | 4 cut(s) | 127, 181, 229, 397 |
| BssT1I | CCWWGG | 1 cut(s) | 351 |
| Bst2UI | CCWGG | 1 cut(s) | 234 |
| Bst4CI | ACNGT | 1 cut(s) | 346 |
| BstC8I | GCNNGC | 1 cut(s) | 76 |
| BstDSI | CCRYGG | 1 cut(s) | 351 |
| BstF5I | GGATG | 1 cut(s) | 214 |
| BstKTI | GATC | 4 cut(s) | 130, 184, 232, 400 |
| BstMAI | GTCTC | 1 cut(s) | 263 |
| BstMBI | GATC | 4 cut(s) | 127, 181, 229, 397 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 75 |
| BstNI | CCWGG | 1 cut(s) | 234 |
| BstSCI | CCNGG | 2 cut(s) | 52, 232 |
| BtgI | CCRYGG | 1 cut(s) | 351 |
| BtgZI | GCGATG | 1 cut(s) | 55 |
| BtsCI | GGATG | 1 cut(s) | 214 |
| Cac8I | GCNNGC | 1 cut(s) | 76 |
| CviAII | CATG | 1 cut(s) | 352 |
| CviJI | RGCY | 4 cut(s) | 78, 164, 329, 356 |
| CviKI_1 | RGCY | 4 cut(s) | 78, 164, 329, 356 |
| DpnI | GATC | 4 cut(s) | 129, 183, 231, 399 |
| DpnII | GATC | 4 cut(s) | 127, 181, 229, 397 |
| Eco130I | CCWWGG | 1 cut(s) | 351 |
| EcoRII | CCWGG | 1 cut(s) | 232 |
| EcoT14I | CCWWGG | 1 cut(s) | 351 |
| ErhI | CCWWGG | 1 cut(s) | 351 |
| Esp3I | CGTCTC | 1 cut(s) | 263 |
| FaeI | CATG | 1 cut(s) | 355 |
| FaiI | YATR | 7 cut(s) | 62, 64, 161, 279, 306, 333, 353 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 249, 281 |
| FaqI | GGGAC | 1 cut(s) | 310 |
| FatI | CATG | 1 cut(s) | 351 |
| FokI | GGATG | 1 cut(s) | 221 |
| HapII | CCGG | 1 cut(s) | 53 |
| Hin1II | CATG | 1 cut(s) | 355 |
| HinfI | GANTC | 1 cut(s) | 190 |
| HpaII | CCGG | 1 cut(s) | 53 |
| HphI | GGTGA | 1 cut(s) | 148 |
| Hpy166II | GTNNAC | 1 cut(s) | 156 |
| Hpy188I | TCNGA | 1 cut(s) | 127 |
| Hpy188III | TCNNGA | 4 cut(s) | 131, 187, 365, 401 |
| Hpy8I | GTNNAC | 1 cut(s) | 156 |
| HpyAV | CCTTC | 2 cut(s) | 21, 251 |
| HpyCH4III | ACNGT | 1 cut(s) | 346 |
| HpyCH4V | TGCA | 2 cut(s) | 69, 243 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 75 |
| Hsp92II | CATG | 1 cut(s) | 355 |
| Kzo9I | GATC | 4 cut(s) | 127, 181, 229, 397 |
| LweI | GCATC | 1 cut(s) | 78 |
| MaeIII | GTNAC | 1 cut(s) | 116 |
| MalI | GATC | 4 cut(s) | 129, 183, 231, 399 |
| MboI | GATC | 4 cut(s) | 127, 181, 229, 397 |
| MboII | GAAGA | 3 cut(s) | 398, 407, 416 |
| MluCI | AATT | 3 cut(s) | 9, 121, 146 |
| MnlI | CCTC | 5 cut(s) | 82, 199, 286, 301, 361 |
| MseI | TTAA | 1 cut(s) | 36 |
| MspI | CCGG | 1 cut(s) | 53 |
| MspR9I | CCNGG | 2 cut(s) | 54, 234 |
| MvaI | CCWGG | 1 cut(s) | 234 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 75 |
| NciI | CCSGG | 1 cut(s) | 54 |
| NcoI | CCATGG | 1 cut(s) | 351 |
| NdeII | GATC | 4 cut(s) | 127, 181, 229, 397 |
| NlaIII | CATG | 1 cut(s) | 355 |
| NmuCI | GTSAC | 1 cut(s) | 116 |
| PfeI | GAWTC | 1 cut(s) | 190 |
| PfoI | TCCNGGA | 1 cut(s) | 232 |
| Psp6I | CCWGG | 1 cut(s) | 232 |
| PspGI | CCWGG | 1 cut(s) | 232 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| Sau3AI | GATC | 4 cut(s) | 127, 181, 229, 397 |
| ScrFI | CCNGG | 2 cut(s) | 54, 234 |
| SetI | ASST | 4 cut(s) | 80, 166, 198, 312 |
| SfaNI | GCATC | 1 cut(s) | 78 |
| SmlI | CTYRAG | 2 cut(s) | 185, 266 |
| SmoI | CTYRAG | 2 cut(s) | 185, 266 |
| Sse9I | AATT | 3 cut(s) | 9, 121, 146 |
| SsiI | CCGC | 1 cut(s) | 284 |
| StyD4I | CCNGG | 2 cut(s) | 52, 232 |
| StyI | CCWWGG | 1 cut(s) | 351 |
| TaaI | ACNGT | 1 cut(s) | 346 |
| TasI | AATT | 3 cut(s) | 9, 121, 146 |
| TfiI | GAWTC | 1 cut(s) | 190 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TseFI | GTSAC | 1 cut(s) | 116 |
| Tsp45I | GTSAC | 1 cut(s) | 116 |
| TspDTI | ATGAA | 2 cut(s) | 339, 399 |
| XapI | RAATTY | 2 cut(s) | 9, 146 |