squalene
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000345.1_g000002 |
| rosa_wichuraiana | Rw6G003120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 19 |
| AcoI | YGGCCR | 1 cut(s) | 336 |
| AcsI | RAATTY | 1 cut(s) | 133 |
| AfaI | GTAC | 1 cut(s) | 312 |
| AflIII | ACRYGT | 1 cut(s) | 92 |
| AgsI | TTSAA | 3 cut(s) | 132, 167, 349 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 82, 114 |
| AluBI | AGCT | 3 cut(s) | 211, 323, 352 |
| AluI | AGCT | 3 cut(s) | 211, 323, 352 |
| Alw21I | GWGCWC | 2 cut(s) | 100, 157 |
| Alw26I | GTCTC | 1 cut(s) | 228 |
| AlwI | GGATC | 1 cut(s) | 19 |
| AoxI | GGCC | 1 cut(s) | 336 |
| ApoI | RAATTY | 1 cut(s) | 133 |
| AsuHPI | GGTGA | 3 cut(s) | 67, 234, 341 |
| AxyI | CCTNAGG | 1 cut(s) | 356 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 294, 327 |
| BalI | TGGCCA | 1 cut(s) | 338 |
| Bbv12I | GWGCWC | 2 cut(s) | 100, 157 |
| BccI | CCATC | 3 cut(s) | 113, 181, 269 |
| BcoDI | GTCTC | 1 cut(s) | 228 |
| BfaI | CTAG | 3 cut(s) | 300, 320, 324 |
| BpmI | CTGGAG | 1 cut(s) | 96 |
| BsaI | GGTCTC | 1 cut(s) | 228 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 82, 112 |
| Bse1I | ACTGG | 1 cut(s) | 79 |
| Bse21I | CCTNAGG | 1 cut(s) | 356 |
| BseMII | CTCAG | 1 cut(s) | 264 |
| BseNI | ACTGG | 1 cut(s) | 79 |
| BseRI | GAGGAG | 3 cut(s) | 90, 95, 344 |
| BshFI | GGCC | 1 cut(s) | 338 |
| BsiHKAI | GWGCWC | 2 cut(s) | 100, 157 |
| BsmAI | GTCTC | 1 cut(s) | 228 |
| BsnI | GGCC | 1 cut(s) | 338 |
| Bso31I | GGTCTC | 1 cut(s) | 228 |
| Bsp1286I | GDGCHC | 2 cut(s) | 100, 157 |
| Bsp143I | GATC | 2 cut(s) | 11, 192 |
| BspANI | GGCC | 1 cut(s) | 338 |
| BspCNI | CTCAG | 1 cut(s) | 265 |
| BspPI | GGATC | 1 cut(s) | 19 |
| BspTNI | GGTCTC | 1 cut(s) | 228 |
| BsrI | ACTGG | 1 cut(s) | 79 |
| BssMI | GATC | 2 cut(s) | 11, 192 |
| Bst4CI | ACNGT | 1 cut(s) | 206 |
| BstDEI | CTNAG | 3 cut(s) | 149, 273, 356 |
| BstKTI | GATC | 2 cut(s) | 14, 195 |
| BstMAI | GTCTC | 1 cut(s) | 228 |
| BstMBI | GATC | 2 cut(s) | 11, 192 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 217 |
| BstNSI | RCATGY | 2 cut(s) | 96, 224 |
| Bsu36I | CCTNAGG | 1 cut(s) | 356 |
| BsuRI | GGCC | 1 cut(s) | 338 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsIMutI | CAGTG | 2 cut(s) | 21, 270 |
| Csp6I | GTAC | 1 cut(s) | 311 |
| CviAII | CATG | 3 cut(s) | 93, 215, 221 |
| CviJI | RGCY | 5 cut(s) | 123, 211, 323, 338, 352 |
| CviKI_1 | RGCY | 5 cut(s) | 123, 211, 323, 338, 352 |
| CviQI | GTAC | 1 cut(s) | 311 |
| DdeI | CTNAG | 3 cut(s) | 149, 273, 356 |
| DpnI | GATC | 2 cut(s) | 13, 194 |
| DpnII | GATC | 2 cut(s) | 11, 192 |
| EaeI | YGGCCR | 1 cut(s) | 336 |
| Eco31I | GGTCTC | 1 cut(s) | 228 |
| Eco81I | CCTNAGG | 1 cut(s) | 356 |
| FaeI | CATG | 3 cut(s) | 96, 218, 224 |
| FaiI | YATR | 3 cut(s) | 94, 216, 222 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 160, 192 |
| FatI | CATG | 3 cut(s) | 92, 214, 220 |
| FspBI | CTAG | 3 cut(s) | 300, 320, 324 |
| GsuI | CTGGAG | 1 cut(s) | 96 |
| HaeIII | GGCC | 1 cut(s) | 338 |
| Hin1II | CATG | 3 cut(s) | 96, 218, 224 |
| HphI | GGTGA | 3 cut(s) | 67, 234, 341 |
| HpyAV | CCTTC | 2 cut(s) | 249, 324 |
| HpyCH4III | ACNGT | 1 cut(s) | 206 |
| HpyCH4V | TGCA | 1 cut(s) | 141 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 217 |
| HpyF3I | CTNAG | 3 cut(s) | 149, 273, 356 |
| Hsp92II | CATG | 3 cut(s) | 96, 218, 224 |
| Kzo9I | GATC | 2 cut(s) | 11, 192 |
| LmnI | GCTCC | 3 cut(s) | 103, 160, 357 |
| LpnPI | CCDG | 4 cut(s) | 60, 215, 263, 343 |
| MaeI | CTAG | 3 cut(s) | 300, 320, 324 |
| MaeIII | GTNAC | 1 cut(s) | 16 |
| MalI | GATC | 2 cut(s) | 13, 194 |
| MboI | GATC | 2 cut(s) | 11, 192 |
| MhlI | GDGCHC | 2 cut(s) | 100, 157 |
| MlsI | TGGCCA | 1 cut(s) | 338 |
| MluCI | AATT | 1 cut(s) | 133 |
| MluNI | TGGCCA | 1 cut(s) | 338 |
| MnlI | CCTC | 5 cut(s) | 25, 73, 111, 193, 268 |
| Mox20I | TGGCCA | 1 cut(s) | 338 |
| MscI | TGGCCA | 1 cut(s) | 338 |
| MseI | TTAA | 1 cut(s) | 48 |
| MslI | CAYNNNNRTG | 1 cut(s) | 219 |
| Msp20I | TGGCCA | 1 cut(s) | 338 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 217 |
| NdeII | GATC | 2 cut(s) | 11, 192 |
| NlaIII | CATG | 3 cut(s) | 96, 218, 224 |
| NmuCI | GTSAC | 1 cut(s) | 16 |
| NspI | RCATGY | 2 cut(s) | 96, 224 |
| PciI | ACATGT | 1 cut(s) | 92 |
| PscI | ACATGT | 1 cut(s) | 92 |
| RsaI | GTAC | 1 cut(s) | 312 |
| RsaNI | GTAC | 1 cut(s) | 311 |
| RseI | CAYNNNNRTG | 1 cut(s) | 219 |
| SaqAI | TTAA | 1 cut(s) | 48 |
| Sau3AI | GATC | 2 cut(s) | 11, 192 |
| SduI | GDGCHC | 2 cut(s) | 100, 157 |
| SetI | ASST | 7 cut(s) | 165, 213, 279, 316, 325, 354, 362 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 219 |
| Sse9I | AATT | 1 cut(s) | 133 |
| SspMI | CTAG | 3 cut(s) | 300, 320, 324 |
| TaaI | ACNGT | 1 cut(s) | 206 |
| TasI | AATT | 1 cut(s) | 133 |
| Tru1I | TTAA | 1 cut(s) | 48 |
| Tru9I | TTAA | 1 cut(s) | 48 |
| TscAI | CASTG | 2 cut(s) | 21, 277 |
| TseFI | GTSAC | 1 cut(s) | 16 |
| Tsp45I | GTSAC | 1 cut(s) | 16 |
| TspDTI | ATGAA | 1 cut(s) | 203 |
| TspRI | CASTG | 2 cut(s) | 21, 277 |
| XapI | RAATTY | 1 cut(s) | 133 |
| XceI | RCATGY | 2 cut(s) | 96, 224 |
| XspI | CTAG | 3 cut(s) | 300, 320, 324 |