Domain of unknown function (DUF3444)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000394.1_g000044 |
| rosa_wichuraiana | Rw7G023310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 518 |
| AciI | CCGC | 2 cut(s) | 600, 679 |
| AclWI | GGATC | 6 cut(s) | 91, 310, 527, 567, 659, 689 |
| AcsI | RAATTY | 2 cut(s) | 142, 642 |
| AcyI | GRCGYC | 1 cut(s) | 515 |
| AfaI | GTAC | 1 cut(s) | 442 |
| AflIII | ACRYGT | 3 cut(s) | 180, 399, 443 |
| AgsI | TTSAA | 4 cut(s) | 150, 369, 454, 699 |
| AhlI | ACTAGT | 1 cut(s) | 467 |
| AluBI | AGCT | 3 cut(s) | 21, 418, 480 |
| AluI | AGCT | 3 cut(s) | 21, 418, 480 |
| AlwI | GGATC | 6 cut(s) | 91, 310, 527, 567, 659, 689 |
| AoxI | GGCC | 2 cut(s) | 597, 719 |
| ApoI | RAATTY | 2 cut(s) | 142, 642 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 145, 364 |
| AspS9I | GGNCC | 2 cut(s) | 597, 719 |
| BbsI | GAAGAC | 2 cut(s) | 62, 281 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 155, 189, 374, 408 |
| BciVI | GTATCC | 2 cut(s) | 199, 418 |
| BcuI | ACTAGT | 1 cut(s) | 467 |
| BfaI | CTAG | 5 cut(s) | 60, 90, 279, 309, 468 |
| BfmI | CTRYAG | 2 cut(s) | 105, 324 |
| BfuI | GTATCC | 2 cut(s) | 199, 418 |
| BisI | GCNGC | 1 cut(s) | 600 |
| BlsI | GCNGC | 1 cut(s) | 601 |
| BmgT120I | GGNCC | 2 cut(s) | 597, 719 |
| BmiI | GGNNCC | 1 cut(s) | 720 |
| BmrI | ACTGGG | 1 cut(s) | 725 |
| BmsI | GCATC | 1 cut(s) | 612 |
| BmuI | ACTGGG | 1 cut(s) | 725 |
| BpiI | GAAGAC | 2 cut(s) | 62, 281 |
| BsaBI | GATNNNNATC | 1 cut(s) | 558 |
| BsaHI | GRCGYC | 1 cut(s) | 515 |
| BsaJI | CCNNGG | 1 cut(s) | 626 |
| Bse1I | ACTGG | 1 cut(s) | 720 |
| Bse3DI | GCAATG | 1 cut(s) | 516 |
| Bse8I | GATNNNNATC | 1 cut(s) | 558 |
| BseDI | CCNNGG | 1 cut(s) | 626 |
| BseGI | GGATG | 1 cut(s) | 627 |
| BseJI | GATNNNNATC | 1 cut(s) | 558 |
| BseMI | GCAATG | 1 cut(s) | 516 |
| BseMII | CTCAG | 1 cut(s) | 495 |
| BseNI | ACTGG | 1 cut(s) | 720 |
| BsgI | GTGCAG | 1 cut(s) | 513 |
| BshFI | GGCC | 2 cut(s) | 599, 721 |
| BsiSI | CCGG | 1 cut(s) | 405 |
| BsnI | GGCC | 2 cut(s) | 599, 721 |
| Bsp143I | GATC | 8 cut(s) | 83, 172, 302, 391, 532, 559, 664, 681 |
| BspACI | CCGC | 2 cut(s) | 600, 679 |
| BspANI | GGCC | 2 cut(s) | 599, 721 |
| BspCNI | CTCAG | 1 cut(s) | 494 |
| BspLI | GGNNCC | 1 cut(s) | 720 |
| BspMAI | CTGCAG | 2 cut(s) | 109, 328 |
| BspPI | GGATC | 6 cut(s) | 91, 310, 527, 567, 659, 689 |
| BsrDI | GCAATG | 1 cut(s) | 516 |
| BsrI | ACTGG | 1 cut(s) | 720 |
| BssECI | CCNNGG | 1 cut(s) | 626 |
| BssMI | GATC | 8 cut(s) | 83, 172, 302, 391, 532, 559, 664, 681 |
| BssNI | GRCGYC | 1 cut(s) | 515 |
| Bst4CI | ACNGT | 1 cut(s) | 459 |
| BstACI | GRCGYC | 1 cut(s) | 515 |
| BstC8I | GCNNGC | 1 cut(s) | 416 |
| BstDEI | CTNAG | 1 cut(s) | 481 |
| BstF5I | GGATG | 1 cut(s) | 627 |
| BstKTI | GATC | 8 cut(s) | 86, 175, 305, 394, 535, 562, 667, 684 |
| BstMBI | GATC | 8 cut(s) | 83, 172, 302, 391, 532, 559, 664, 681 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 104, 323 |
| BstNSI | RCATGY | 5 cut(s) | 32, 184, 251, 403, 447 |
| BstSFI | CTRYAG | 2 cut(s) | 105, 324 |
| BstV2I | GAAGAC | 2 cut(s) | 62, 281 |
| BstX2I | RGATCY | 1 cut(s) | 664 |
| BstYI | RGATCY | 1 cut(s) | 664 |
| BsuI | GTATCC | 2 cut(s) | 199, 418 |
| BsuRI | GGCC | 2 cut(s) | 599, 721 |
| BtsCI | GGATG | 1 cut(s) | 627 |
| BtsI | GCAGTG | 2 cut(s) | 173, 392 |
| BtsIMutI | CAGTG | 2 cut(s) | 173, 392 |
| Cac8I | GCNNGC | 1 cut(s) | 416 |
| Cfr13I | GGNCC | 2 cut(s) | 597, 719 |
| Csp6I | GTAC | 1 cut(s) | 441 |
| CviAII | CATG | 5 cut(s) | 29, 181, 248, 400, 444 |
| CviJI | RGCY | 8 cut(s) | 21, 98, 317, 418, 480, 599, 691, 721 |
| CviKI_1 | RGCY | 8 cut(s) | 21, 98, 317, 418, 480, 599, 691, 721 |
| CviQI | GTAC | 1 cut(s) | 441 |
| DdeI | CTNAG | 1 cut(s) | 481 |
| DpnI | GATC | 8 cut(s) | 85, 174, 304, 393, 534, 561, 666, 683 |
| DpnII | GATC | 8 cut(s) | 83, 172, 302, 391, 532, 559, 664, 681 |
| DraI | TTTAAA | 1 cut(s) | 583 |
| Eco32I | GATATC | 1 cut(s) | 238 |
| EcoO109I | RGGNCCY | 1 cut(s) | 719 |
| EcoRV | GATATC | 1 cut(s) | 238 |
| FaeI | CATG | 5 cut(s) | 32, 184, 251, 403, 447 |
| FatI | CATG | 5 cut(s) | 28, 180, 247, 399, 443 |
| Fnu4HI | GCNGC | 1 cut(s) | 600 |
| FokI | GGATG | 1 cut(s) | 634 |
| Fsp4HI | GCNGC | 1 cut(s) | 600 |
| FspBI | CTAG | 5 cut(s) | 60, 90, 279, 309, 468 |
| GluI | GCNGC | 1 cut(s) | 600 |
| HaeIII | GGCC | 2 cut(s) | 599, 721 |
| HapII | CCGG | 1 cut(s) | 405 |
| Hin1I | GRCGYC | 1 cut(s) | 515 |
| Hin1II | CATG | 5 cut(s) | 32, 184, 251, 403, 447 |
| HinfI | GANTC | 2 cut(s) | 485, 695 |
| HpaII | CCGG | 1 cut(s) | 405 |
| Hpy166II | GTNNAC | 5 cut(s) | 6, 77, 112, 296, 331 |
| Hpy188I | TCNGA | 4 cut(s) | 160, 379, 484, 648 |
| Hpy188III | TCNNGA | 4 cut(s) | 150, 369, 530, 536 |
| Hpy8I | GTNNAC | 5 cut(s) | 6, 77, 112, 296, 331 |
| HpyCH4III | ACNGT | 1 cut(s) | 459 |
| HpyCH4IV | ACGT | 1 cut(s) | 515 |
| HpyCH4V | TGCA | 7 cut(s) | 32, 107, 166, 251, 326, 385, 494 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 104, 323 |
| HpyF3I | CTNAG | 1 cut(s) | 481 |
| HpySE526I | ACGT | 1 cut(s) | 515 |
| Hsp92I | GRCGYC | 1 cut(s) | 515 |
| Hsp92II | CATG | 5 cut(s) | 32, 184, 251, 403, 447 |
| Kzo9I | GATC | 8 cut(s) | 83, 172, 302, 391, 532, 559, 664, 681 |
| LmnI | GCTCC | 1 cut(s) | 26 |
| LpnPI | CCDG | 9 cut(s) | 199, 404, 418, 447, 543, 549, 575, 580, 701 |
| LweI | GCATC | 1 cut(s) | 612 |
| MaeI | CTAG | 5 cut(s) | 60, 90, 279, 309, 468 |
| MaeII | ACGT | 1 cut(s) | 515 |
| MaeIII | GTNAC | 1 cut(s) | 446 |
| MalI | GATC | 8 cut(s) | 85, 174, 304, 393, 534, 561, 666, 683 |
| MboI | GATC | 8 cut(s) | 83, 172, 302, 391, 532, 559, 664, 681 |
| MboII | GAAGA | 6 cut(s) | 67, 76, 138, 286, 295, 357 |
| MfeI | CAATTG | 1 cut(s) | 519 |
| MflI | RGATCY | 1 cut(s) | 664 |
| MluCI | AATT | 4 cut(s) | 142, 519, 547, 642 |
| MnlI | CCTC | 6 cut(s) | 131, 350, 550, 604, 636, 732 |
| MroXI | GAANNNNTTC | 2 cut(s) | 145, 364 |
| MseI | TTAA | 2 cut(s) | 582, 615 |
| MspI | CCGG | 1 cut(s) | 405 |
| MunI | CAATTG | 1 cut(s) | 519 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 104, 323 |
| NdeII | GATC | 8 cut(s) | 83, 172, 302, 391, 532, 559, 664, 681 |
| NlaIII | CATG | 5 cut(s) | 32, 184, 251, 403, 447 |
| NlaIV | GGNNCC | 1 cut(s) | 720 |
| NmuCI | GTSAC | 1 cut(s) | 446 |
| NspI | RCATGY | 5 cut(s) | 32, 184, 251, 403, 447 |
| PciI | ACATGT | 3 cut(s) | 180, 399, 443 |
| PdmI | GAANNNNTTC | 2 cut(s) | 145, 364 |
| PfeI | GAWTC | 2 cut(s) | 485, 695 |
| PkrI | GCNGC | 1 cut(s) | 601 |
| PscI | ACATGT | 3 cut(s) | 180, 399, 443 |
| PspN4I | GGNNCC | 1 cut(s) | 720 |
| PspPI | GGNCC | 2 cut(s) | 597, 719 |
| PstI | CTGCAG | 2 cut(s) | 109, 328 |
| PsuI | RGATCY | 1 cut(s) | 664 |
| RsaI | GTAC | 1 cut(s) | 442 |
| RsaNI | GTAC | 1 cut(s) | 441 |
| SaqAI | TTAA | 2 cut(s) | 582, 615 |
| SatI | GCNGC | 1 cut(s) | 600 |
| Sau3AI | GATC | 8 cut(s) | 83, 172, 302, 391, 532, 559, 664, 681 |
| Sau96I | GGNCC | 2 cut(s) | 597, 719 |
| SetI | ASST | 6 cut(s) | 23, 420, 482, 518, 594, 615 |
| SfaNI | GCATC | 1 cut(s) | 612 |
| SfcI | CTRYAG | 2 cut(s) | 105, 324 |
| SpeI | ACTAGT | 1 cut(s) | 467 |
| Sse9I | AATT | 4 cut(s) | 142, 519, 547, 642 |
| SsiI | CCGC | 2 cut(s) | 600, 679 |
| SspMI | CTAG | 5 cut(s) | 60, 90, 279, 309, 468 |
| TaaI | ACNGT | 1 cut(s) | 459 |
| TaiI | ACGT | 1 cut(s) | 518 |
| TaqI | TCGA | 1 cut(s) | 562 |
| TasI | AATT | 4 cut(s) | 142, 519, 547, 642 |
| TauI | GCSGC | 1 cut(s) | 602 |
| TfiI | GAWTC | 2 cut(s) | 485, 695 |
| Tru1I | TTAA | 2 cut(s) | 582, 615 |
| Tru9I | TTAA | 2 cut(s) | 582, 615 |
| TscAI | CASTG | 2 cut(s) | 173, 392 |
| TseFI | GTSAC | 1 cut(s) | 446 |
| Tsp45I | GTSAC | 1 cut(s) | 446 |
| TspRI | CASTG | 2 cut(s) | 173, 392 |
| XapI | RAATTY | 2 cut(s) | 142, 642 |
| XceI | RCATGY | 5 cut(s) | 32, 184, 251, 403, 447 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 712 |
| XmnI | GAANNNNTTC | 2 cut(s) | 145, 364 |
| XspI | CTAG | 5 cut(s) | 60, 90, 279, 309, 468 |
| ZraI | GACGTC | 1 cut(s) | 516 |