squalene
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g03871 |
| rosa_multiflora | Rmu_sc0001293.1_g000028 Rmu_sc0003131.1_g000038 |
| rosa_samantha | Rh6BG031200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 195 |
| AccB1I | GGYRCC | 2 cut(s) | 206, 221 |
| AccBSI | CCGCTC | 1 cut(s) | 227 |
| AciI | CCGC | 1 cut(s) | 225 |
| AcyI | GRCGYC | 2 cut(s) | 192, 207 |
| AfaI | GTAC | 2 cut(s) | 17, 187 |
| AgsI | TTSAA | 1 cut(s) | 112 |
| AspLEI | GCGC | 2 cut(s) | 142, 209 |
| AsuHPI | GGTGA | 1 cut(s) | 64 |
| BanI | GGYRCC | 2 cut(s) | 206, 221 |
| BccI | CCATC | 2 cut(s) | 130, 160 |
| BceAI | ACGGC | 1 cut(s) | 163 |
| BclI | TGATCA | 1 cut(s) | 66 |
| BfoI | RGCGCY | 1 cut(s) | 210 |
| BisI | GCNGC | 1 cut(s) | 225 |
| BlsI | GCNGC | 1 cut(s) | 226 |
| BmiI | GGNNCC | 2 cut(s) | 208, 223 |
| BsaHI | GRCGYC | 2 cut(s) | 192, 207 |
| BsaJI | CCNNGG | 1 cut(s) | 246 |
| BsaWI | WCCGGW | 1 cut(s) | 160 |
| Bse118I | RCCGGY | 1 cut(s) | 218 |
| BseDI | CCNNGG | 1 cut(s) | 246 |
| BseGI | GGATG | 1 cut(s) | 141 |
| BseRI | GAGGAG | 3 cut(s) | 185, 188, 191 |
| Bsh1285I | CGRYCG | 1 cut(s) | 161 |
| BshNI | GGYRCC | 2 cut(s) | 206, 221 |
| BsiEI | CGRYCG | 1 cut(s) | 161 |
| BsiSI | CCGG | 3 cut(s) | 161, 210, 219 |
| Bsp143I | GATC | 1 cut(s) | 66 |
| BspACI | CCGC | 1 cut(s) | 225 |
| BspHI | TCATGA | 1 cut(s) | 63 |
| BspLI | GGNNCC | 2 cut(s) | 208, 223 |
| BspT107I | GGYRCC | 2 cut(s) | 206, 221 |
| BsrBI | CCGCTC | 1 cut(s) | 227 |
| BsrFI | RCCGGY | 1 cut(s) | 218 |
| BssAI | RCCGGY | 1 cut(s) | 218 |
| BssECI | CCNNGG | 1 cut(s) | 246 |
| BssMI | GATC | 1 cut(s) | 66 |
| BssNI | GRCGYC | 2 cut(s) | 192, 207 |
| BssT1I | CCWWGG | 1 cut(s) | 246 |
| BstACI | GRCGYC | 2 cut(s) | 192, 207 |
| BstF5I | GGATG | 1 cut(s) | 141 |
| BstH2I | RGCGCY | 1 cut(s) | 210 |
| BstHHI | GCGC | 2 cut(s) | 142, 209 |
| BstKTI | GATC | 1 cut(s) | 69 |
| BstMBI | GATC | 1 cut(s) | 66 |
| BstMCI | CGRYCG | 1 cut(s) | 161 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 215, 224, 230 |
| BtsCI | GGATG | 1 cut(s) | 141 |
| CciI | TCATGA | 1 cut(s) | 63 |
| CfoI | GCGC | 2 cut(s) | 142, 209 |
| Cfr10I | RCCGGY | 1 cut(s) | 218 |
| Csp6I | GTAC | 2 cut(s) | 16, 186 |
| CviAII | CATG | 1 cut(s) | 64 |
| CviJI | RGCY | 3 cut(s) | 38, 51, 89 |
| CviKI_1 | RGCY | 3 cut(s) | 38, 51, 89 |
| CviQI | GTAC | 2 cut(s) | 16, 186 |
| DinI | GGCGCC | 1 cut(s) | 208 |
| DpnI | GATC | 1 cut(s) | 68 |
| DpnII | GATC | 1 cut(s) | 66 |
| Eco130I | CCWWGG | 1 cut(s) | 246 |
| EcoT14I | CCWWGG | 1 cut(s) | 246 |
| EgeI | GGCGCC | 1 cut(s) | 208 |
| EheI | GGCGCC | 1 cut(s) | 208 |
| ErhI | CCWWGG | 1 cut(s) | 246 |
| FaeI | CATG | 1 cut(s) | 67 |
| FaiI | YATR | 1 cut(s) | 65 |
| FatI | CATG | 1 cut(s) | 63 |
| FbaI | TGATCA | 1 cut(s) | 66 |
| Fnu4HI | GCNGC | 1 cut(s) | 225 |
| FokI | GGATG | 1 cut(s) | 148 |
| Fsp4HI | GCNGC | 1 cut(s) | 225 |
| GlaI | GCGC | 2 cut(s) | 141, 208 |
| GluI | GCNGC | 1 cut(s) | 225 |
| HaeII | RGCGCY | 1 cut(s) | 210 |
| HapII | CCGG | 3 cut(s) | 161, 210, 219 |
| HhaI | GCGC | 2 cut(s) | 142, 209 |
| Hin1I | GRCGYC | 2 cut(s) | 192, 207 |
| Hin1II | CATG | 1 cut(s) | 67 |
| Hin6I | GCGC | 2 cut(s) | 140, 207 |
| HinP1I | GCGC | 2 cut(s) | 140, 207 |
| HinfI | GANTC | 1 cut(s) | 30 |
| HpaII | CCGG | 3 cut(s) | 161, 210, 219 |
| HphI | GGTGA | 1 cut(s) | 64 |
| Hpy188I | TCNGA | 1 cut(s) | 254 |
| Hpy188III | TCNNGA | 2 cut(s) | 64, 112 |
| Hpy99I | CGWCG | 2 cut(s) | 194, 197 |
| HpyCH4IV | ACGT | 2 cut(s) | 18, 192 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 215, 224, 230 |
| HpySE526I | ACGT | 2 cut(s) | 18, 192 |
| Hsp92I | GRCGYC | 2 cut(s) | 192, 207 |
| Hsp92II | CATG | 1 cut(s) | 67 |
| HspAI | GCGC | 2 cut(s) | 140, 207 |
| KasI | GGCGCC | 1 cut(s) | 206 |
| Ksp22I | TGATCA | 1 cut(s) | 66 |
| Kzo9I | GATC | 1 cut(s) | 66 |
| LpnPI | CCDG | 5 cut(s) | 8, 88, 174, 223, 232 |
| MaeII | ACGT | 2 cut(s) | 18, 192 |
| MalI | GATC | 1 cut(s) | 68 |
| MbiI | CCGCTC | 1 cut(s) | 227 |
| MboI | GATC | 1 cut(s) | 66 |
| MboII | GAAGA | 1 cut(s) | 52 |
| Mly113I | GGCGCC | 1 cut(s) | 207 |
| MlyI | GAGTC | 1 cut(s) | 39 |
| MnlI | CCTC | 5 cut(s) | 97, 126, 163, 166, 169 |
| MspI | CCGG | 3 cut(s) | 161, 210, 219 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 215, 224, 230 |
| NarI | GGCGCC | 1 cut(s) | 207 |
| NdeII | GATC | 1 cut(s) | 66 |
| NlaIII | CATG | 1 cut(s) | 67 |
| NlaIV | GGNNCC | 2 cut(s) | 208, 223 |
| NmeAIII | GCCGAG | 1 cut(s) | 27 |
| PagI | TCATGA | 1 cut(s) | 63 |
| PflFI | GACNNNGTC | 1 cut(s) | 194 |
| PkrI | GCNGC | 1 cut(s) | 226 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PluTI | GGCGCC | 1 cut(s) | 210 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| PspN4I | GGNNCC | 2 cut(s) | 208, 223 |
| PsyI | GACNNNGTC | 1 cut(s) | 194 |
| RsaI | GTAC | 2 cut(s) | 17, 187 |
| RsaNI | GTAC | 2 cut(s) | 16, 186 |
| SatI | GCNGC | 1 cut(s) | 225 |
| Sau3AI | GATC | 1 cut(s) | 66 |
| SchI | GAGTC | 1 cut(s) | 39 |
| SetI | ASST | 4 cut(s) | 21, 102, 195, 252 |
| SfoI | GGCGCC | 1 cut(s) | 208 |
| SsiI | CCGC | 1 cut(s) | 225 |
| SspDI | GGCGCC | 1 cut(s) | 206 |
| StyI | CCWWGG | 1 cut(s) | 246 |
| TaiI | ACGT | 2 cut(s) | 21, 195 |
| TaqI | TCGA | 1 cut(s) | 157 |
| TauI | GCSGC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 1 cut(s) | 52 |
| Tth111I | GACNNNGTC | 1 cut(s) | 194 |
| ZraI | GACGTC | 1 cut(s) | 193 |