Rmu_sc0001648.1_g000048

Enoyl-(Acyl carrier protein) reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001648.1
OG0031147
Physical Location & Seq
Reverse (-)
275864 .. 280241
4378 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001648.1_g000048.1.cds

Sequence Viewer

Length: 879 bp
atgtgtatgttggaagtggtacttgctcttgagagatgcaagagcatatctgcattatctgaagatgagtttaaacagataatgaagataaatttgatgtctgcttggtttccggtaaaggccgttggcagaagaatgcgagatcataagttaggaggttccatcagattgttgacctcgattgtaagagggctttatacaggagctgccgcctatggtgctcgttcagcagctctgcagcagttagtaagagtatttccaagcgtgccaccagccttcaccagcaaagacaaccagaggaacaaggagcaattttgttcctatcaccccacccttttagcaataaagaaaccttccaccgccgccgtcatccacaagaaaattttatcacctgcttctttggactggagcgggagtgaaacctttggcggtcaagaaattgatcacctcattgaaatcctagtcgaaggattttactttattgagatccttttcaaagggtacattgtcgagatcttcctcgatgaattccaatctgacctcaatggaatttaccttatcaagatcttccccgatgggtcgcccacgacgcctgctctcgccatcgcggcgccgaaactcaacgtcgtgctctccgcggccaggctcgacgccaagccaacgagccgattccggcgtggagcttcggagcttcccagacatctgacgaacaaaaccggcgaaacccagaggggttgggatcgtggagttagatggcgtcatcctctggtggtccaacggtgggacggagcggccacggtggaggccgacatcgacggtggagtggtgggcatggtggctcagagagagagagggaaagagagcctgagacgaggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
adh_short_C2

Protein Analysis

292

Amino Acids

32.45

Weight (kDa)

9.6

Isoelectric Point (pI)

48.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0031147)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0001648.1_g000048
rosa_samantha Rh5BG309700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 400
Acc36I ACCTGC 1 cut(s) 400
AccB1I GGYRCC 1 cut(s) 610
AccBSI CCGCTC 2 cut(s) 411, 791
AccII CGCG 2 cut(s) 608, 638
AciI CCGC 9 cut(s) 210, 360, 363, 411, 429, 608, 636, 638, 791
AclWI GGATC 2 cut(s) 481, 747
AcoI YGGCCR 2 cut(s) 639, 792
AcsI RAATTY 4 cut(s) 91, 381, 527, 549
AcuI CTGAAG 1 cut(s) 81
AcyI GRCGYC 4 cut(s) 590, 611, 651, 757
AfaI GTAC 2 cut(s) 21, 503
AfiI CCNNNNNNNGG 2 cut(s) 642, 781
AgsI TTSAA 2 cut(s) 455, 496
AjnI CCWGG 1 cut(s) 641
AluBI AGCT 4 cut(s) 206, 233, 683, 691
AluI AGCT 4 cut(s) 206, 233, 683, 691
Alw21I GWGCWC 2 cut(s) 223, 633
Alw26I GTCTC 1 cut(s) 862
AlwI GGATC 2 cut(s) 481, 747
AlwNI CAGNNNCTG 1 cut(s) 206
AoxI GGCC 4 cut(s) 120, 639, 792, 804
ApeKI GCWGC 3 cut(s) 206, 230, 238
ApoI RAATTY 4 cut(s) 91, 381, 527, 549
AspLEI GCGC 1 cut(s) 613
AspS9I GGNCC 1 cut(s) 772
AsuHPI GGTGA 4 cut(s) 271, 317, 381, 437
AvaII GGWCC 1 cut(s) 772
BanI GGYRCC 1 cut(s) 610
Bbv12I GWGCWC 2 cut(s) 223, 633
BbvI GCAGC 3 cut(s) 193, 242, 250
BccI CCATC 4 cut(s) 170, 569, 611, 747
BceAI ACGGC 2 cut(s) 107, 350
BciT130I CCWGG 1 cut(s) 643
BclI TGATCA 1 cut(s) 442
BcoDI GTCTC 1 cut(s) 862
BfaI CTAG 1 cut(s) 461
BfmI CTRYAG 1 cut(s) 236
BfoI RGCGCY 1 cut(s) 614
BfuAI ACCTGC 1 cut(s) 400
BglI GCCNNNNNGGC 1 cut(s) 608
BglII AGATCT 2 cut(s) 513, 564
BisI GCNGC 8 cut(s) 207, 210, 231, 239, 363, 609, 639, 792
BlsI GCNGC 8 cut(s) 208, 211, 232, 240, 364, 610, 640, 793
Bme1390I CCNGG 1 cut(s) 643
Bme18I GGWCC 1 cut(s) 772
BmgT120I GGNCC 1 cut(s) 772
BmiI GGNNCC 2 cut(s) 160, 612
BmrFI CCNGG 1 cut(s) 643
BmsI GCATC 1 cut(s) 26
BpmI CTGGAG 1 cut(s) 427
BpuEI CTTGAG 1 cut(s) 50
BsaHI GRCGYC 4 cut(s) 590, 611, 651, 757
BsaJI CCNNGG 2 cut(s) 636, 795
BsaWI WCCGGW 1 cut(s) 112
BsaXI ACNNNNNCTCC 2 cut(s) 400, 430
Bsc4I CCNNNNNNNGG 2 cut(s) 642, 781
Bse118I RCCGGY 1 cut(s) 716
Bse1I ACTGG 1 cut(s) 410
BseBI CCWGG 1 cut(s) 643
BseDI CCNNGG 2 cut(s) 636, 795
BseGI GGATG 2 cut(s) 369, 760
BseLI CCNNNNNNNGG 2 cut(s) 642, 781
BseMII CTCAG 2 cut(s) 854, 857
BseNI ACTGG 1 cut(s) 410
BseXI GCAGC 3 cut(s) 193, 242, 250
Bsh1236I CGCG 2 cut(s) 608, 638
BshFI GGCC 4 cut(s) 122, 641, 794, 806
BshNI GGYRCC 1 cut(s) 610
BsiHKAI GWGCWC 2 cut(s) 223, 633
BsiSI CCGG 3 cut(s) 113, 673, 717
BslFI GGGAC 1 cut(s) 797
BslI CCNNNNNNNGG 2 cut(s) 642, 781
BsmAI GTCTC 1 cut(s) 862
BsmBI CGTCTC 1 cut(s) 862
BsmFI GGGAC 1 cut(s) 797
BsmI GAATGC 1 cut(s) 141
BsnI GGCC 4 cut(s) 122, 641, 794, 806
Bsp1286I GDGCHC 2 cut(s) 223, 633
Bsp143I GATC 6 cut(s) 142, 442, 486, 513, 564, 739
BspACI CCGC 9 cut(s) 210, 360, 363, 411, 429, 608, 636, 638, 791
BspANI GGCC 4 cut(s) 122, 641, 794, 806
BspCNI CTCAG 2 cut(s) 853, 858
BspFNI CGCG 2 cut(s) 608, 638
BspLI GGNNCC 2 cut(s) 160, 612
BspMAI CTGCAG 1 cut(s) 240
BspMI ACCTGC 1 cut(s) 400
BspPI GGATC 2 cut(s) 481, 747
BspT107I GGYRCC 1 cut(s) 610
BsrBI CCGCTC 2 cut(s) 411, 791
BsrFI RCCGGY 1 cut(s) 716
BsrI ACTGG 1 cut(s) 410
BssAI RCCGGY 1 cut(s) 716
BssECI CCNNGG 2 cut(s) 636, 795
BssMI GATC 6 cut(s) 142, 442, 486, 513, 564, 739
BssNI GRCGYC 4 cut(s) 590, 611, 651, 757
Bst2UI CCWGG 1 cut(s) 643
Bst4CI ACNGT 3 cut(s) 780, 799, 818
BstACI GRCGYC 4 cut(s) 590, 611, 651, 757
BstC8I GCNNGC 2 cut(s) 266, 594
BstDEI CTNAG 2 cut(s) 840, 866
BstDSI CCRYGG 2 cut(s) 636, 795
BstF5I GGATG 2 cut(s) 369, 760
BstFNI CGCG 2 cut(s) 608, 638
BstH2I RGCGCY 1 cut(s) 614
BstHHI GCGC 1 cut(s) 613
BstKTI GATC 6 cut(s) 145, 445, 489, 516, 567, 742
BstMAI GTCTC 1 cut(s) 862
BstMBI GATC 6 cut(s) 142, 442, 486, 513, 564, 739
BstMWI GCNNNNNNNGC 4 cut(s) 218, 227, 589, 608
BstNI CCWGG 1 cut(s) 643
BstSCI CCNGG 1 cut(s) 641
BstSFI CTRYAG 1 cut(s) 236
BstUI CGCG 2 cut(s) 608, 638
BstV1I GCAGC 3 cut(s) 193, 242, 250
BstX2I RGATCY 3 cut(s) 486, 513, 564
BstYI RGATCY 3 cut(s) 486, 513, 564
BsuRI GGCC 4 cut(s) 122, 641, 794, 806
BtgI CCRYGG 2 cut(s) 636, 795
BtgZI GCGATG 1 cut(s) 589
BtsCI GGATG 2 cut(s) 369, 760
BveI ACCTGC 1 cut(s) 400
Cac8I GCNNGC 2 cut(s) 266, 594
CaiI CAGNNNCTG 1 cut(s) 206
CfoI GCGC 1 cut(s) 613
Cfr10I RCCGGY 1 cut(s) 716
Cfr13I GGNCC 1 cut(s) 772
Cfr42I CCGCGG 1 cut(s) 639
CseI GACGC 3 cut(s) 598, 659, 746
Csp6I GTAC 2 cut(s) 20, 502
CviAII CATG 1 cut(s) 832
CviQI GTAC 2 cut(s) 20, 502
DdeI CTNAG 2 cut(s) 840, 866
DinI GGCGCC 1 cut(s) 612
DpnI GATC 6 cut(s) 144, 444, 488, 515, 566, 741
DpnII GATC 6 cut(s) 142, 442, 486, 513, 564, 739
DraI TTTAAA 1 cut(s) 73
EaeI YGGCCR 2 cut(s) 639, 792
Eco47I GGWCC 1 cut(s) 772
Eco57I CTGAAG 1 cut(s) 81
EcoRI GAATTC 1 cut(s) 527
EcoRII CCWGG 1 cut(s) 641
EgeI GGCGCC 1 cut(s) 612
EheI GGCGCC 1 cut(s) 612
Esp3I CGTCTC 1 cut(s) 862
FaeI CATG 1 cut(s) 835
FaiI YATR 6 cut(s) 8, 47, 147, 198, 216, 833
FalI AAGNNNNNCTT 1 cut(s) 38
FaqI GGGAC 1 cut(s) 797
FatI CATG 1 cut(s) 831
FauI CCCGC 1 cut(s) 404
FbaI TGATCA 1 cut(s) 442
Fnu4HI GCNGC 8 cut(s) 207, 210, 231, 239, 363, 609, 639, 792
FokI GGATG 2 cut(s) 356, 747
Fsp4HI GCNGC 8 cut(s) 207, 210, 231, 239, 363, 609, 639, 792
FspBI CTAG 1 cut(s) 461
GlaI GCGC 1 cut(s) 612
GluI GCNGC 8 cut(s) 207, 210, 231, 239, 363, 609, 639, 792
GsuI CTGGAG 1 cut(s) 427
HaeII RGCGCY 1 cut(s) 614
HaeIII GGCC 4 cut(s) 122, 641, 794, 806
HapII CCGG 3 cut(s) 113, 673, 717
HgaI GACGC 3 cut(s) 598, 659, 746
HhaI GCGC 1 cut(s) 613
Hin1I GRCGYC 4 cut(s) 590, 611, 651, 757
Hin1II CATG 1 cut(s) 835
Hin6I GCGC 1 cut(s) 611
HinP1I GCGC 1 cut(s) 611
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HinfI GANTC 1 cut(s) 669
HpaII CCGG 3 cut(s) 113, 673, 717
HphI GGTGA 4 cut(s) 271, 317, 381, 437
Hpy166II GTNNAC 1 cut(s) 174
Hpy188I TCNGA 6 cut(s) 61, 167, 538, 688, 705, 843
Hpy188III TCNNGA 4 cut(s) 29, 434, 511, 562
Hpy8I GTNNAC 1 cut(s) 174
Hpy99I CGWCG 4 cut(s) 592, 629, 653, 818
HpyAV CCTTC 3 cut(s) 286, 363, 461
HpyCH4III ACNGT 3 cut(s) 780, 799, 818
HpyCH4IV ACGT 1 cut(s) 624
HpyCH4V TGCA 3 cut(s) 39, 53, 238
HpyF10VI GCNNNNNNNGC 4 cut(s) 218, 227, 589, 608
HpyF3I CTNAG 2 cut(s) 840, 866
HpySE526I ACGT 1 cut(s) 624
Hsp92I GRCGYC 4 cut(s) 590, 611, 651, 757
Hsp92II CATG 1 cut(s) 835
HspAI GCGC 1 cut(s) 611
KasI GGCGCC 1 cut(s) 610
Ksp22I TGATCA 1 cut(s) 442
KspI CCGCGG 1 cut(s) 639
Kzo9I GATC 6 cut(s) 142, 442, 486, 513, 564, 739
LmnI GCTCC 6 cut(s) 203, 307, 408, 680, 688, 788
Lsp1109I GCAGC 3 cut(s) 193, 242, 250
LweI GCATC 1 cut(s) 26
MaeI CTAG 1 cut(s) 461
MaeII ACGT 1 cut(s) 624
MalI GATC 6 cut(s) 144, 444, 488, 515, 566, 741
MbiI CCGCTC 2 cut(s) 411, 791
MboI GATC 6 cut(s) 142, 442, 486, 513, 564, 739
MboII GAAGA 5 cut(s) 74, 97, 144, 508, 559
MflI RGATCY 3 cut(s) 486, 513, 564
MhlI GDGCHC 2 cut(s) 223, 633
MluCI AATT 6 cut(s) 91, 311, 381, 438, 527, 549
Mly113I GGCGCC 1 cut(s) 611
MmeI TCCRAC 1 cut(s) 799
MseI TTAA 1 cut(s) 72
MspA1I CMGCKG 1 cut(s) 638
MspI CCGG 3 cut(s) 113, 673, 717
MspR9I CCNGG 1 cut(s) 643
MssI GTTTAAAC 1 cut(s) 73
Mva1269I GAATGC 1 cut(s) 141
MvaI CCWGG 1 cut(s) 643
MvnI CGCG 2 cut(s) 608, 638
MwoI GCNNNNNNNGC 4 cut(s) 218, 227, 589, 608
NarI GGCGCC 1 cut(s) 611
NdeII GATC 6 cut(s) 142, 442, 486, 513, 564, 739
NlaIII CATG 1 cut(s) 835
NlaIV GGNNCC 2 cut(s) 160, 612
PaqCI CACCTGC 1 cut(s) 400
PctI GAATGC 1 cut(s) 141
PfeI GAWTC 1 cut(s) 669
PkrI GCNGC 8 cut(s) 208, 211, 232, 240, 364, 610, 640, 793
PluTI GGCGCC 1 cut(s) 614
PmeI GTTTAAAC 1 cut(s) 73
Psp6I CCWGG 1 cut(s) 641
PspGI CCWGG 1 cut(s) 641
PspN4I GGNNCC 2 cut(s) 160, 612
PspPI GGNCC 1 cut(s) 772
PstI CTGCAG 1 cut(s) 240
PstNI CAGNNNCTG 1 cut(s) 206
PsuI RGATCY 3 cut(s) 486, 513, 564
RsaI GTAC 2 cut(s) 21, 503
RsaNI GTAC 2 cut(s) 20, 502
SacII CCGCGG 1 cut(s) 639
SaqAI TTAA 1 cut(s) 72
SatI GCNGC 8 cut(s) 207, 210, 231, 239, 363, 609, 639, 792
Sau3AI GATC 6 cut(s) 142, 442, 486, 513, 564, 739
Sau96I GGNCC 1 cut(s) 772
ScrFI CCNGG 1 cut(s) 643
SduI GDGCHC 2 cut(s) 223, 633
SfaNI GCATC 1 cut(s) 26
SfcI CTRYAG 1 cut(s) 236
SfoI GGCGCC 1 cut(s) 612
Sfr303I CCGCGG 1 cut(s) 639
SgrBI CCGCGG 1 cut(s) 639
SinI GGWCC 1 cut(s) 772
SmlI CTYRAG 1 cut(s) 29
SmoI CTYRAG 1 cut(s) 29
Sse9I AATT 6 cut(s) 91, 311, 381, 438, 527, 549
SsiI CCGC 9 cut(s) 210, 360, 363, 411, 429, 608, 636, 638, 791
SspDI GGCGCC 1 cut(s) 610
SspMI CTAG 1 cut(s) 461
StyD4I CCNGG 1 cut(s) 641
TaaI ACNGT 3 cut(s) 780, 799, 818
TaiI ACGT 1 cut(s) 627
TaqI TCGA 6 cut(s) 179, 465, 510, 522, 648, 813
TasI AATT 6 cut(s) 91, 311, 381, 438, 527, 549
TauI GCSGC 5 cut(s) 212, 365, 611, 641, 794
TfiI GAWTC 1 cut(s) 669
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TseI GCWGC 3 cut(s) 206, 230, 238
TspDTI ATGAA 2 cut(s) 98, 540
TspGWI ACGGA 1 cut(s) 801
VpaK11BI GGWCC 1 cut(s) 772
XapI RAATTY 4 cut(s) 91, 381, 527, 549
XspI CTAG 1 cut(s) 461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.