Rmu_sc0001930.1_g000007

Protein NRT1 PTR FAMILY 5.10-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001930.1
Physical Location & Seq
Reverse (-)
58346 .. 58790
445 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001930.1_g000007.1.cds

Sequence Viewer

Length: 327 bp
atggccatttcccatggttggtcggaagaatatccgatggcccttataatgttcctcaacaaagccttgcttgcaccagatgatttagagaaaaacaggaaggtgtgtaccatcgctaatgttgaggaagcaatggttgttcttaggctatttccaatatgggctacatgcttggcatgtgctattatgtatgcacagtccactactttcttcaccaagcacggtgcaaccatggacagaactattgtgcccggttttgacataccagctgcttcacttcagacaaaatgcagaacggatggcaatccaattcaaagagcaacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

11.99

Weight (kDa)

6.7

Isoelectric Point (pI)

46.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031171)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0001930.1_g000007 Rmu_sc0005026.1_g000012

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 47
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 263
AfaI GTAC 1 cut(s) 109
AfiI CCNNNNNNNGG 1 cut(s) 18
AgsI TTSAA 1 cut(s) 314
AluBI AGCT 1 cut(s) 269
AluI AGCT 1 cut(s) 269
AoxI GGCC 2 cut(s) 3, 39
ApeKI GCWGC 1 cut(s) 269
AspS9I GGNCC 1 cut(s) 40
AsuC2I CCSGG 1 cut(s) 252
AsuHPI GGTGA 1 cut(s) 205
BaeGI GKGCMC 1 cut(s) 252
BalI TGGCCA 1 cut(s) 5
BbvI GCAGC 1 cut(s) 256
BccI CCATC 3 cut(s) 31, 119, 293
BcnI CCSGG 1 cut(s) 252
BisI GCNGC 1 cut(s) 270
BlsI GCNGC 1 cut(s) 271
Bme1390I CCNGG 1 cut(s) 252
BmgT120I GGNCC 1 cut(s) 40
BmrFI CCNGG 1 cut(s) 252
BpuMI CCSGG 1 cut(s) 252
BsaBI GATNNNNATC 1 cut(s) 303
BsaJI CCNNGG 2 cut(s) 13, 231
Bsc4I CCNNNNNNNGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 138
Bse8I GATNNNNATC 1 cut(s) 303
BseDI CCNNGG 2 cut(s) 13, 231
BseGI GGATG 1 cut(s) 304
BseJI GATNNNNATC 1 cut(s) 303
BseLI CCNNNNNNNGG 1 cut(s) 18
BseMI GCAATG 1 cut(s) 138
BseSI GKGCMC 1 cut(s) 252
BseXI GCAGC 1 cut(s) 256
BshFI GGCC 2 cut(s) 5, 41
BsiSI CCGG 1 cut(s) 252
BslI CCNNNNNNNGG 1 cut(s) 18
BsnI GGCC 2 cut(s) 5, 41
Bsp1286I GDGCHC 1 cut(s) 252
Bsp19I CCATGG 2 cut(s) 13, 231
BspANI GGCC 2 cut(s) 5, 41
BsrDI GCAATG 1 cut(s) 138
BssECI CCNNGG 2 cut(s) 13, 231
BssT1I CCWWGG 2 cut(s) 13, 231
Bst4CI ACNGT 2 cut(s) 198, 224
BstC8I GCNNGC 1 cut(s) 72
BstDEI CTNAG 1 cut(s) 143
BstDSI CCRYGG 2 cut(s) 13, 231
BstF5I GGATG 1 cut(s) 304
BstMWI GCNNNNNNNGC 1 cut(s) 71
BstNSI RCATGY 2 cut(s) 171, 180
BstSCI CCNGG 1 cut(s) 250
BstSLI GKGCMC 1 cut(s) 252
BstV1I GCAGC 1 cut(s) 256
BsuRI GGCC 2 cut(s) 5, 41
BtgI CCRYGG 2 cut(s) 13, 231
BtgZI GCGATG 1 cut(s) 97
BtsCI GGATG 1 cut(s) 304
Cac8I GCNNGC 1 cut(s) 72
Cfr13I GGNCC 1 cut(s) 40
Csp6I GTAC 1 cut(s) 108
CviAII CATG 4 cut(s) 14, 168, 177, 232
CviJI RGCY 6 cut(s) 5, 41, 65, 148, 164, 269
CviKI_1 RGCY 6 cut(s) 5, 41, 65, 148, 164, 269
CviQI GTAC 1 cut(s) 108
DdeI CTNAG 1 cut(s) 143
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 2 cut(s) 13, 231
Eco57I CTGAAG 1 cut(s) 263
EcoT14I CCWWGG 2 cut(s) 13, 231
ErhI CCWWGG 2 cut(s) 13, 231
FaeI CATG 4 cut(s) 17, 171, 180, 235
FaiI YATR 9 cut(s) 15, 47, 160, 169, 178, 188, 192, 233, 263
FalI AAGNNNNNCTT 3 cut(s) 54, 86, 307
FatI CATG 4 cut(s) 13, 167, 176, 231
Fnu4HI GCNGC 1 cut(s) 270
FokI GGATG 1 cut(s) 311
Fsp4HI GCNGC 1 cut(s) 270
GluI GCNGC 1 cut(s) 270
HaeIII GGCC 2 cut(s) 5, 41
HapII CCGG 1 cut(s) 252
Hin1II CATG 4 cut(s) 17, 171, 180, 235
HpaII CCGG 1 cut(s) 252
HphI GGTGA 1 cut(s) 205
Hpy166II GTNNAC 2 cut(s) 108, 201
Hpy188I TCNGA 3 cut(s) 25, 36, 282
Hpy8I GTNNAC 2 cut(s) 108, 201
HpyAV CCTTC 1 cut(s) 94
HpyCH4III ACNGT 2 cut(s) 198, 224
HpyCH4V TGCA 4 cut(s) 74, 194, 227, 291
HpyF10VI GCNNNNNNNGC 1 cut(s) 71
HpyF3I CTNAG 1 cut(s) 143
Hsp92II CATG 4 cut(s) 17, 171, 180, 235
LpnPI CCDG 4 cut(s) 82, 90, 265, 279
Lsp1109I GCAGC 1 cut(s) 256
MboII GAAGA 2 cut(s) 38, 202
MhlI GDGCHC 1 cut(s) 252
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 1 cut(s) 309
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 2 cut(s) 65, 118
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 269
MspI CCGG 1 cut(s) 252
MspR9I CCNGG 1 cut(s) 252
MwoI GCNNNNNNNGC 1 cut(s) 71
NciI CCSGG 1 cut(s) 252
NcoI CCATGG 2 cut(s) 13, 231
NlaIII CATG 4 cut(s) 17, 171, 180, 235
NspI RCATGY 2 cut(s) 171, 180
PkrI GCNGC 1 cut(s) 271
PsiI TTATAA 1 cut(s) 47
PspPI GGNCC 1 cut(s) 40
PvuII CAGCTG 1 cut(s) 269
RsaI GTAC 1 cut(s) 109
RsaNI GTAC 1 cut(s) 108
SatI GCNGC 1 cut(s) 270
Sau96I GGNCC 1 cut(s) 40
ScrFI CCNGG 1 cut(s) 252
SduI GDGCHC 1 cut(s) 252
SetI ASST 2 cut(s) 105, 271
Sse9I AATT 1 cut(s) 309
StyD4I CCNGG 1 cut(s) 250
StyI CCWWGG 2 cut(s) 13, 231
TaaI ACNGT 2 cut(s) 198, 224
TasI AATT 1 cut(s) 309
TseI GCWGC 1 cut(s) 269
TspGWI ACGGA 1 cut(s) 311
XceI RCATGY 2 cut(s) 171, 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.