Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002121.1

Orthogroup ID

OG0015463

Physical Location & Seq

Genomic Coordinates Reverse (-)

3231 .. 7364

Gene Structure 4134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

atggccgccaaacggtttttaactgattcagaatccgaccaagatcagctcaatgataataaccggaagagaccaagactttccttcgcttctgtgattggagaagtggttatggtcaactccatgcaaaaccttttctcatccttggagcctttgcttagaagagtggtgagtgaagaggttgatcaagttctaaggcggggctctcgctctttaacaaggtcgccttcattgagaatccaagcgctcgagccatcgagcttatatctagtctttgccaagagccccgctctcccaattttcactgcaagcaagatatcagacgaagacaacaaccaaattcaaatccttgttgtggacaagaacaggatcagtggtagccaccaaatgggttcgatctcttttccacatccggtcaaagtagaaatcgttgttctggacggtgacttccctagtggagatcgggagaattggacgagtcaggaattcaacaacaatgttttgaaggagagaaccggcaagaggccgttgctcaccggagacgtgaatgttacggtgagagatgggtgtgcgacgatcggggacattgagtttacagacaattcgagctggatccggagcaggaagtttaggcttggtgcaagggtggctcctgggacggggtatcagggtctgaggattcgggaagccatgactgatgctttcgttgtcaaagatcatcgtggagagttgtacaagaagcatcatccaccaatgttggaagacgaagtttggcggctggagaagattgggaaagatggagcttttcacaggaagttagctgctgacaacattcatacagttcaagacttcttgaagatgttggtcgtcgaccgatcgaagcttaaacagatattagggattggaatgtcagaaaagatgtgggaagtaacagtgaagcatgcaagaacatgcgtgatgggtaacaaaatgtacattttccggggtcctcatttcgagctcctcttatctccaatatgtcaagtgataaaggctgtgatcaatgggcagacttttcctactcgggacctaagcaaccacgttaataggaactatattgagaacttgttaaggcaagcgcatgcaaactggaattccttggaggcggttgatacaatgtcgaatgagactgccttacttacacaaggtcatgtagaggatcagcactatcctcagacaatgatggtaagagcattggatcatcaagttatcaataatgggcagcagcagctagcggatattaagtgtatcaataatgttggagctgctggttatccacagagcaacaccatgatggggtttgagtgcagtgacaattggcagatcagttcaccatactcgtcgttcagcccattgatggatactggtgtcatcaagtgtagcacctcagcagactcatcatcttcagatggggatttaggatctcaggaagttattgtcgttgaaggcgaaggcgaaatcgcgtccgtcgacgtcgtcaccttgccggcgaactccgacccaatcattctacgatctgctatttccgatgctcatgtttcccgacccgctcttcacatccgatcaagattcactttcaaaattccggcgaagtctgaactttctgcctctgaaaattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002237 GO:0002239 GO:0002682 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009889 GO:0009987 GO:0010033 GO:0010112 GO:0010224 GO:0010337 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0032350 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043902 GO:0044424 GO:0044464 GO:0045088 GO:0046885 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071216 GO:0071219 GO:0080090 GO:0080134 GO:0080142 GO:0097159 GO:0098542 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Calmodulin_bind

Protein Analysis

552

Amino Acids

61.6

Weight (kDa)

6.48

Isoelectric Point (pI)

44.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Calmodulin_bind	PF07887	89 - 240	8.3e-58	Calmodulin binding protein-like N-terminal domain
Calmod_bind_M	PF20451	252 - 318	2e-33	Calmodulin binding protein central domain
Calmod_bind_C	PF20452	323 - 382	8.5e-17	Calmodulin binding protein C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73805
fragaria_vesca	FvH4_5g11800
malus_domestica	MD14G1228600.v1.1
prunus_persica	Prupe.5G223600_v2.0.a1
pyrus_communis	pycom06g19470 pycom14g18990
rosa_chinensis	RchiOBHm_Chr7g0185801
rosa_laevigata	RLG00000004882
rosa_multiflora	Rmu_sc0002121.1_g000002
rosa_roxburghii	Rroxscaffold_3G00268620
rosa_rugosa	Rorug06G0471400.1
rosa_samantha	Rh7AG070900 Rh7BG076900 Rh7CG076900 Rh7DG076800
rosa_wichuraiana	Rw7G006410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1515
AccB7I	CCANNNNNTGG	1 cut(s)	388
AccBSI	CCGCTC	2 cut(s)	290, 1589
AccI	GTMKAC	2 cut(s)	870, 1509
AccII	CGCG	1 cut(s)	1502
AccIII	TCCGGA	1 cut(s)	615
AciI	CCGC	7 cut(s)	6, 199, 288, 775, 1145, 1274, 1587
AclWI	GGATC	6 cut(s)	377, 607, 620, 1206, 1245, 1468
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	339, 485, 1132, 1620
AcuI	CTGAAG	1 cut(s)	1428
AcyI	GRCGYC	1 cut(s)	1512
AfaI	GTAC	2 cut(s)	734, 974
AfeI	AGCGCT	1 cut(s)	246
AfiI	CCNNNNNNNGG	7 cut(s)	12, 355, 388, 522, 659, 1335, 1396
AgsI	TTSAA	7 cut(s)	344, 490, 505, 845, 856, 1484, 1618
AjiI	CACGTC	1 cut(s)	544
AjnI	CCWGG	1 cut(s)	652
AluBI	AGCT	9 cut(s)	49, 261, 609, 803, 821, 883, 1000, 1270, 1304
AluI	AGCT	9 cut(s)	49, 261, 609, 803, 821, 883, 1000, 1270, 1304
Alw21I	GWGCWC	1 cut(s)	1002
Alw26I	GTCTC	3 cut(s)	64, 534, 1160
AlwI	GGATC	6 cut(s)	377, 607, 620, 1206, 1245, 1468
AlwNI	CAGNNNCTG	1 cut(s)	673
Ama87I	CYCGRG	2 cut(s)	248, 1062
Aor13HI	TCCGGA	1 cut(s)	615
Aor51HI	AGCGCT	1 cut(s)	246
AoxI	GGCC	2 cut(s)	3, 524
ApeKI	GCWGC	5 cut(s)	821, 1261, 1264, 1267, 1304
ApoI	RAATTY	4 cut(s)	339, 485, 1132, 1620
AspLEI	GCGC	2 cut(s)	247, 1120
AspS9I	GGNCC	2 cut(s)	986, 1066
AsuC2I	CCSGG	1 cut(s)	983
AsuHPI	GGTGA	6 cut(s)	181, 455, 526, 568, 1362, 1510
AsuNHI	GCTAGC	1 cut(s)	1270
AvaI	CYCGRG	2 cut(s)	248, 1062
AvaII	GGWCC	2 cut(s)	986, 1066
BaeI	ACNNNNGTAYC	2 cut(s)	1392, 1425
BamHI	GGATCC	1 cut(s)	612
BanII	GRGCYC	3 cut(s)	206, 287, 1002
BbsI	GAAGAC	2 cut(s)	333, 768
Bbv12I	GWGCWC	1 cut(s)	1002
BbvCI	CCTCAGC	1 cut(s)	1426
BbvI	GCAGC	5 cut(s)	808, 1273, 1276, 1279, 1291
BccI	CCATC	8 cut(s)	262, 557, 791, 952, 1216, 1327, 1390, 1442
BceAI	ACGGC	1 cut(s)	511
BciT130I	CCWGG	1 cut(s)	654
BciVI	GTATCC	1 cut(s)	1393
BclI	TGATCA	2 cut(s)	184, 1038
BcnI	CCSGG	1 cut(s)	983
BcoDI	GTCTC	3 cut(s)	64, 534, 1160
BfaI	CTAG	3 cut(s)	269, 453, 1271
BfoI	RGCGCY	1 cut(s)	248
BfuI	GTATCC	1 cut(s)	1393
BisI	GCNGC	7 cut(s)	6, 776, 822, 1262, 1265, 1268, 1305
BlsI	GCNGC	7 cut(s)	7, 777, 823, 1263, 1266, 1269, 1306
Bme1390I	CCNGG	2 cut(s)	654, 983
Bme18I	GGWCC	2 cut(s)	986, 1066
BmeT110I	CYCGRG	2 cut(s)	248, 1062
BmgBI	CACGTC	1 cut(s)	544
BmgT120I	GGNCC	2 cut(s)	986, 1066
BmiI	GGNNCC	5 cut(s)	150, 614, 651, 987, 1067
BmrFI	CCNGG	2 cut(s)	654, 983
BmsI	GCATC	3 cut(s)	688, 751, 1558
BmtI	GCTAGC	1 cut(s)	1274
BpiI	GAAGAC	2 cut(s)	333, 768
BplI	GAGNNNNNCTC	2 cut(s)	274, 306
BpmI	CTGGAG	1 cut(s)	800
Bpu10I	CCTNAGC	2 cut(s)	1070, 1426
BpuMI	CCSGG	1 cut(s)	983
BsaHI	GRCGYC	1 cut(s)	1512
BsaI	GGTCTC	1 cut(s)	64
BsaJI	CCNNGG	4 cut(s)	144, 653, 982, 1137
BsaWI	WCCGGW	4 cut(s)	63, 412, 536, 615
BsaXI	ACNNNNNCTCC	2 cut(s)	93, 123
Bsc4I	CCNNNNNNNGG	7 cut(s)	12, 355, 388, 522, 659, 1335, 1396
Bse118I	RCCGGY	2 cut(s)	515, 1525
Bse1I	ACTGG	2 cut(s)	1133, 1408
BseAI	TCCGGA	1 cut(s)	615
BseBI	CCWGG	1 cut(s)	654
BseDI	CCNNGG	4 cut(s)	144, 653, 982, 1137
BseGI	GGATG	4 cut(s)	140, 409, 745, 1596
BseLI	CCNNNNNNNGG	7 cut(s)	12, 355, 388, 522, 659, 1335, 1396
BseMII	CTCAG	4 cut(s)	665, 1226, 1440, 1478
BseNI	ACTGG	2 cut(s)	1133, 1408
BseRI	GAGGAG	1 cut(s)	992
BseXI	GCAGC	5 cut(s)	808, 1273, 1276, 1279, 1291
BsgI	GTGCAG	1 cut(s)	1366
Bsh1236I	CGCG	1 cut(s)	1502
Bsh1285I	CGRYCG	3 cut(s)	579, 874, 878
BshFI	GGCC	2 cut(s)	5, 526
BsiEI	CGRYCG	3 cut(s)	579, 874, 878
BsiHKAI	GWGCWC	1 cut(s)	1002
BsiHKCI	CYCGRG	2 cut(s)	248, 1062
BsiSI	CCGG	8 cut(s)	64, 413, 516, 537, 616, 982, 1526, 1625
BslFI	GGGAC	3 cut(s)	596, 670, 1079
BslI	CCNNNNNNNGG	7 cut(s)	12, 355, 388, 522, 659, 1335, 1396
BsmAI	GTCTC	3 cut(s)	64, 534, 1160
BsmBI	CGTCTC	1 cut(s)	534
BsmFI	GGGAC	3 cut(s)	596, 670, 1079
BsnI	GGCC	2 cut(s)	5, 526
Bso31I	GGTCTC	1 cut(s)	64
BsoBI	CYCGRG	2 cut(s)	248, 1062
Bsp1286I	GDGCHC	3 cut(s)	206, 287, 1002
Bsp13I	TCCGGA	1 cut(s)	615
Bsp1407I	TGTACA	2 cut(s)	732, 972
BspACI	CCGC	7 cut(s)	6, 199, 288, 775, 1145, 1274, 1587
BspANI	GGCC	2 cut(s)	5, 526
BspCNI	CTCAG	4 cut(s)	666, 1225, 1439, 1477
BspEI	TCCGGA	1 cut(s)	615
BspFNI	CGCG	1 cut(s)	1502
BspLI	GGNNCC	5 cut(s)	150, 614, 651, 987, 1067
BspOI	GCTAGC	1 cut(s)	1274
BspPI	GGATC	6 cut(s)	377, 607, 620, 1206, 1245, 1468
BspQI	GCTCTTC	1 cut(s)	1596
BspTNI	GGTCTC	1 cut(s)	64
BsrBI	CCGCTC	2 cut(s)	290, 1589
BsrFI	RCCGGY	2 cut(s)	515, 1525
BsrGI	TGTACA	2 cut(s)	732, 972
BsrI	ACTGG	2 cut(s)	1133, 1408
BssAI	RCCGGY	2 cut(s)	515, 1525
BssECI	CCNNGG	4 cut(s)	144, 653, 982, 1137
BssNI	GRCGYC	1 cut(s)	1512
BssT1I	CCWWGG	2 cut(s)	144, 1137
Bst2UI	CCWGG	1 cut(s)	654
Bst4CI	ACNGT	5 cut(s)	15, 443, 556, 841, 934
Bst6I	CTCTTC	4 cut(s)	62, 157, 171, 1596
BstACI	GRCGYC	1 cut(s)	1512
BstAUI	TGTACA	2 cut(s)	732, 972
BstC8I	GCNNGC	6 cut(s)	310, 942, 1116, 1122, 1272, 1527
BstDEI	CTNAG	7 cut(s)	158, 194, 674, 1070, 1212, 1426, 1464
BstF5I	GGATG	4 cut(s)	140, 409, 745, 1596
BstFNI	CGCG	1 cut(s)	1502
BstH2I	RGCGCY	1 cut(s)	248
BstHHI	GCGC	2 cut(s)	247, 1120
BstMAI	GTCTC	3 cut(s)	64, 534, 1160
BstMCI	CGRYCG	3 cut(s)	579, 874, 878
BstMWI	GCNNNNNNNGC	2 cut(s)	647, 1267
BstNI	CCWGG	1 cut(s)	654
BstNSI	RCATGY	3 cut(s)	944, 954, 1124
BstSCI	CCNGG	2 cut(s)	652, 981
BstUI	CGCG	1 cut(s)	1502
BstV1I	GCAGC	5 cut(s)	808, 1273, 1276, 1279, 1291
BstV2I	GAAGAC	2 cut(s)	333, 768
BstX2I	RGATCY	2 cut(s)	612, 1460
BstYI	RGATCY	2 cut(s)	612, 1460
BsuI	GTATCC	1 cut(s)	1393
BsuRI	GGCC	2 cut(s)	5, 526
BtrI	CACGTC	1 cut(s)	544
BtsCI	GGATG	4 cut(s)	140, 409, 745, 1596
BtsI	GCAGTG	2 cut(s)	303, 1354
BtsIMutI	CAGTG	4 cut(s)	303, 379, 939, 1354
Cac8I	GCNNGC	6 cut(s)	310, 942, 1116, 1122, 1272, 1527
CaiI	CAGNNNCTG	1 cut(s)	673
CfoI	GCGC	2 cut(s)	247, 1120
Cfr10I	RCCGGY	2 cut(s)	515, 1525
Cfr13I	GGNCC	2 cut(s)	986, 1066
CseI	GACGC	1 cut(s)	1491
Csp6I	GTAC	2 cut(s)	733, 973
CspCI	CAANNNNNGTGG	2 cut(s)	738, 773
CviAII	CATG	8 cut(s)	124, 691, 941, 951, 1121, 1190, 1330, 1574
CviQI	GTAC	2 cut(s)	733, 973
DdeI	CTNAG	7 cut(s)	158, 194, 674, 1070, 1212, 1426, 1464
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	62, 157, 171, 1596
EarI	CTCTTC	4 cut(s)	62, 157, 171, 1596
Ecl136II	GAGCTC	1 cut(s)	1000
Eco130I	CCWWGG	2 cut(s)	144, 1137
Eco24I	GRGCYC	3 cut(s)	206, 287, 1002
Eco31I	GGTCTC	1 cut(s)	64
Eco32I	GATATC	1 cut(s)	318
Eco47I	GGWCC	2 cut(s)	986, 1066
Eco47III	AGCGCT	1 cut(s)	246
Eco53kI	GAGCTC	1 cut(s)	1000
Eco57I	CTGAAG	1 cut(s)	1428
Eco88I	CYCGRG	2 cut(s)	248, 1062
EcoICRI	GAGCTC	1 cut(s)	1000
EcoO109I	RGGNCCY	2 cut(s)	986, 1066
EcoRI	GAATTC	2 cut(s)	485, 1132
EcoRII	CCWGG	1 cut(s)	652
EcoRV	GATATC	1 cut(s)	318
EcoT14I	CCWWGG	2 cut(s)	144, 1137
EcoT38I	GRGCYC	3 cut(s)	206, 287, 1002
ErhI	CCWWGG	2 cut(s)	144, 1137
Esp3I	CGTCTC	1 cut(s)	534
FaeI	CATG	8 cut(s)	127, 694, 944, 954, 1124, 1193, 1333, 1577
FalI	AAGNNNNNCTT	4 cut(s)	211, 243, 1597, 1629
FaqI	GGGAC	3 cut(s)	596, 670, 1079
FatI	CATG	8 cut(s)	123, 690, 940, 950, 1120, 1189, 1329, 1573
FauI	CCCGC	3 cut(s)	192, 295, 1594
FbaI	TGATCA	2 cut(s)	184, 1038
FblI	GTMKAC	2 cut(s)	870, 1509
Fnu4HI	GCNGC	7 cut(s)	6, 776, 822, 1262, 1265, 1268, 1305
FokI	GGATG	4 cut(s)	127, 396, 732, 1583
FriOI	GRGCYC	3 cut(s)	206, 287, 1002
Fsp4HI	GCNGC	7 cut(s)	6, 776, 822, 1262, 1265, 1268, 1305
FspBI	CTAG	3 cut(s)	269, 453, 1271
GlaI	GCGC	2 cut(s)	246, 1119
GluI	GCNGC	7 cut(s)	6, 776, 822, 1262, 1265, 1268, 1305
GsuI	CTGGAG	1 cut(s)	800
HaeII	RGCGCY	1 cut(s)	248
HaeIII	GGCC	2 cut(s)	5, 526
HapII	CCGG	8 cut(s)	64, 413, 516, 537, 616, 982, 1526, 1625
HgaI	GACGC	1 cut(s)	1491
HhaI	GCGC	2 cut(s)	247, 1120
Hin1I	GRCGYC	1 cut(s)	1512
Hin1II	CATG	8 cut(s)	127, 694, 944, 954, 1124, 1193, 1333, 1577
Hin6I	GCGC	2 cut(s)	245, 1118
HinP1I	GCGC	2 cut(s)	245, 1118
HincII	GTYRAC	3 cut(s)	118, 871, 1510
HindII	GTYRAC	3 cut(s)	118, 871, 1510
HindIII	AAGCTT	1 cut(s)	881
HinfI	GANTC	7 cut(s)	26, 32, 237, 478, 679, 1433, 1608
HpaII	CCGG	8 cut(s)	64, 413, 516, 537, 616, 982, 1526, 1625
HphI	GGTGA	6 cut(s)	181, 455, 526, 568, 1362, 1510
Hpy166II	GTNNAC	6 cut(s)	118, 358, 594, 871, 1370, 1510
Hpy8I	GTNNAC	6 cut(s)	118, 358, 594, 871, 1370, 1510
Hpy99I	CGWCG	6 cut(s)	577, 872, 1384, 1511, 1514, 1517
HpyAV	CCTTC	5 cut(s)	94, 237, 499, 1478, 1484
HpyCH4III	ACNGT	5 cut(s)	15, 443, 556, 841, 934
HpyCH4IV	ACGT	3 cut(s)	543, 1080, 1512
HpyCH4V	TGCA	6 cut(s)	127, 308, 641, 944, 1124, 1347
HpyF10VI	GCNNNNNNNGC	2 cut(s)	647, 1267
HpyF3I	CTNAG	7 cut(s)	158, 194, 674, 1070, 1212, 1426, 1464
HpySE526I	ACGT	3 cut(s)	543, 1080, 1512
Hsp92I	GRCGYC	1 cut(s)	1512
Hsp92II	CATG	8 cut(s)	127, 694, 944, 954, 1124, 1193, 1333, 1577
HspAI	GCGC	2 cut(s)	245, 1118
Kpn2I	TCCGGA	1 cut(s)	615
KroI	GCCGGC	1 cut(s)	1525
KroNI	GCCGGC	1 cut(s)	1527
Ksp22I	TGATCA	2 cut(s)	184, 1038
LguI	GCTCTTC	1 cut(s)	1596
LmnI	GCTCC	6 cut(s)	148, 618, 655, 800, 1005, 1301
Lsp1109I	GCAGC	5 cut(s)	808, 1273, 1276, 1279, 1291
LweI	GCATC	3 cut(s)	688, 751, 1558
MaeI	CTAG	3 cut(s)	269, 453, 1271
MaeII	ACGT	3 cut(s)	543, 1080, 1512
MaeIII	GTNAC	6 cut(s)	443, 550, 928, 962, 1349, 1516
MbiI	CCGCTC	2 cut(s)	290, 1589
MboII	GAAGA	9 cut(s)	79, 174, 188, 338, 773, 796, 868, 1434, 1583
MfeI	CAATTG	1 cut(s)	1354
MflI	RGATCY	2 cut(s)	612, 1460
MhlI	GDGCHC	3 cut(s)	206, 287, 1002
MluCI	AATT	9 cut(s)	297, 339, 469, 485, 601, 1132, 1354, 1620, 1654
MlyI	GAGTC	2 cut(s)	487, 1427
MmeI	TCCRAC	4 cut(s)	60, 738, 1279, 1560
MroI	TCCGGA	1 cut(s)	615
MroNI	GCCGGC	1 cut(s)	1525
MseI	TTAA	6 cut(s)	20, 215, 885, 1083, 1109, 1281
MslI	CAYNNNNRTG	1 cut(s)	1331
MspI	CCGG	8 cut(s)	64, 413, 516, 537, 616, 982, 1526, 1625
MspR9I	CCNGG	2 cut(s)	654, 983
MunI	CAATTG	1 cut(s)	1354
MvaI	CCWGG	1 cut(s)	654
MvnI	CGCG	1 cut(s)	1502
MwoI	GCNNNNNNNGC	2 cut(s)	647, 1267
NaeI	GCCGGC	1 cut(s)	1527
NciI	CCSGG	1 cut(s)	983
NgoMIV	GCCGGC	1 cut(s)	1525
NheI	GCTAGC	1 cut(s)	1270
NlaIII	CATG	8 cut(s)	127, 694, 944, 954, 1124, 1193, 1333, 1577
NlaIV	GGNNCC	5 cut(s)	150, 614, 651, 987, 1067
NmuCI	GTSAC	3 cut(s)	443, 1349, 1516
NspI	RCATGY	3 cut(s)	944, 954, 1124
PaeI	GCATGC	2 cut(s)	944, 1124
PaeR7I	CTCGAG	1 cut(s)	248
PciSI	GCTCTTC	1 cut(s)	1596
PcsI	WCGNNNNNNNCGW	2 cut(s)	1485, 1506
PdiI	GCCGGC	1 cut(s)	1527
PfeI	GAWTC	5 cut(s)	26, 32, 237, 679, 1608
PflFI	GACNNNGTC	1 cut(s)	1514
PflMI	CCANNNNNTGG	1 cut(s)	388
PkrI	GCNGC	7 cut(s)	7, 777, 823, 1263, 1266, 1269, 1306
Ple19I	CGATCG	2 cut(s)	579, 878
PleI	GAGTC	2 cut(s)	486, 1427
PpsI	GAGTC	2 cut(s)	486, 1427
PpuMI	RGGWCCY	2 cut(s)	986, 1066
Psp124BI	GAGCTC	1 cut(s)	1002
Psp5II	RGGWCCY	2 cut(s)	986, 1066
Psp6I	CCWGG	1 cut(s)	652
PspGI	CCWGG	1 cut(s)	652
PspN4I	GGNNCC	5 cut(s)	150, 614, 651, 987, 1067
PspPI	GGNCC	2 cut(s)	986, 1066
PspPPI	RGGWCCY	2 cut(s)	986, 1066
PspXI	VCTCGAGB	1 cut(s)	248
PstNI	CAGNNNCTG	1 cut(s)	673
PsuI	RGATCY	2 cut(s)	612, 1460
PsyI	GACNNNGTC	1 cut(s)	1514
PvuI	CGATCG	2 cut(s)	579, 878
RsaI	GTAC	2 cut(s)	734, 974
RsaNI	GTAC	2 cut(s)	733, 973
RseI	CAYNNNNRTG	1 cut(s)	1331
SacI	GAGCTC	1 cut(s)	1002
SalI	GTCGAC	2 cut(s)	869, 1508
SapI	GCTCTTC	1 cut(s)	1596
SaqAI	TTAA	6 cut(s)	20, 215, 885, 1083, 1109, 1281
SatI	GCNGC	7 cut(s)	6, 776, 822, 1262, 1265, 1268, 1305
Sau96I	GGNCC	2 cut(s)	986, 1066
SchI	GAGTC	2 cut(s)	487, 1427
ScrFI	CCNGG	2 cut(s)	654, 983
SduI	GDGCHC	3 cut(s)	206, 287, 1002
SfaNI	GCATC	3 cut(s)	688, 751, 1558
Sfr274I	CTCGAG	1 cut(s)	248
SgrDI	CGTCGACG	1 cut(s)	1508
SinI	GGWCC	2 cut(s)	986, 1066
SlaI	CTCGAG	1 cut(s)	248
SmiMI	CAYNNNNRTG	1 cut(s)	1331
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
SphI	GCATGC	2 cut(s)	944, 1124
Sse9I	AATT	9 cut(s)	297, 339, 469, 485, 601, 1132, 1354, 1620, 1654
SsiI	CCGC	7 cut(s)	6, 199, 288, 775, 1145, 1274, 1587
SspMI	CTAG	3 cut(s)	269, 453, 1271
SstI	GAGCTC	1 cut(s)	1002
StyD4I	CCNGG	2 cut(s)	652, 981
StyI	CCWWGG	2 cut(s)	144, 1137
TaaI	ACNGT	5 cut(s)	15, 443, 556, 841, 934
TaiI	ACGT	3 cut(s)	546, 1083, 1515
TaqI	TCGA	9 cut(s)	249, 257, 395, 605, 870, 878, 996, 1160, 1509
TaqII	GACCGA	1 cut(s)	888
TasI	AATT	9 cut(s)	297, 339, 469, 485, 601, 1132, 1354, 1620, 1654
TatI	WGTACW	2 cut(s)	732, 972
TauI	GCSGC	2 cut(s)	8, 778
TfiI	GAWTC	5 cut(s)	26, 32, 237, 679, 1608
Tru1I	TTAA	6 cut(s)	20, 215, 885, 1083, 1109, 1281
Tru9I	TTAA	6 cut(s)	20, 215, 885, 1083, 1109, 1281
TscAI	CASTG	4 cut(s)	310, 379, 939, 1354
TseFI	GTSAC	3 cut(s)	443, 1349, 1516
TseI	GCWGC	5 cut(s)	821, 1261, 1264, 1267, 1304
Tsp45I	GTSAC	3 cut(s)	443, 1349, 1516
TspDTI	ATGAA	2 cut(s)	219, 824
TspGWI	ACGGA	1 cut(s)	1495
TspRI	CASTG	4 cut(s)	310, 379, 939, 1354
Tth111I	GACNNNGTC	1 cut(s)	1514
Van91I	CCANNNNNTGG	1 cut(s)	388
VpaK11BI	GGWCC	2 cut(s)	986, 1066
XapI	RAATTY	4 cut(s)	339, 485, 1132, 1620
XceI	RCATGY	3 cut(s)	944, 954, 1124
XhoI	CTCGAG	1 cut(s)	248
XmiI	GTMKAC	2 cut(s)	870, 1509
XspI	CTAG	3 cut(s)	269, 453, 1271
ZraI	GACGTC	1 cut(s)	1513

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.