Vacuolar-processing enzyme-like
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0002345.1_g000003 |
| rosa_rugosa | Rorug02G0409100 |
| rosa_samantha | Rh2BG481300 Rh2DG490100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 182 |
| AcuI | CTGAAG | 1 cut(s) | 50 |
| AfaI | GTAC | 1 cut(s) | 59 |
| AflIII | ACRYGT | 1 cut(s) | 22 |
| AgsI | TTSAA | 1 cut(s) | 86 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 78, 110 |
| AluBI | AGCT | 1 cut(s) | 89 |
| AluI | AGCT | 1 cut(s) | 89 |
| Alw26I | GTCTC | 2 cut(s) | 122, 219 |
| AlwI | GGATC | 1 cut(s) | 182 |
| ApeKI | GCWGC | 2 cut(s) | 89, 173 |
| BauI | CACGAG | 1 cut(s) | 159 |
| BbvI | GCAGC | 2 cut(s) | 76, 185 |
| BccI | CCATC | 1 cut(s) | 64 |
| BcoDI | GTCTC | 2 cut(s) | 122, 219 |
| BfmI | CTRYAG | 2 cut(s) | 150, 201 |
| BglII | AGATCT | 1 cut(s) | 13 |
| BisI | GCNGC | 2 cut(s) | 90, 174 |
| BlsI | GCNGC | 2 cut(s) | 91, 175 |
| BmsI | GCATC | 2 cut(s) | 49, 164 |
| BsaI | GGTCTC | 1 cut(s) | 122 |
| BseGI | GGATG | 1 cut(s) | 75 |
| BseMII | CTCAG | 1 cut(s) | 31 |
| BseXI | GCAGC | 2 cut(s) | 76, 185 |
| BsmAI | GTCTC | 2 cut(s) | 122, 219 |
| Bso31I | GGTCTC | 1 cut(s) | 122 |
| Bsp143I | GATC | 2 cut(s) | 13, 187 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BspMAI | CTGCAG | 1 cut(s) | 205 |
| BspPI | GGATC | 1 cut(s) | 182 |
| BspTNI | GGTCTC | 1 cut(s) | 122 |
| BssMI | GATC | 2 cut(s) | 13, 187 |
| BssSI | CACGAG | 1 cut(s) | 159 |
| Bst2BI | CACGAG | 1 cut(s) | 159 |
| BstDEI | CTNAG | 1 cut(s) | 17 |
| BstF5I | GGATG | 1 cut(s) | 75 |
| BstKTI | GATC | 2 cut(s) | 16, 190 |
| BstMAI | GTCTC | 2 cut(s) | 122, 219 |
| BstMBI | GATC | 2 cut(s) | 13, 187 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 152, 200 |
| BstNSI | RCATGY | 2 cut(s) | 26, 180 |
| BstSFI | CTRYAG | 2 cut(s) | 150, 201 |
| BstV1I | GCAGC | 2 cut(s) | 76, 185 |
| BstX2I | RGATCY | 1 cut(s) | 13 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 220 |
| BstYI | RGATCY | 1 cut(s) | 13 |
| BtsCI | GGATG | 1 cut(s) | 75 |
| Csp6I | GTAC | 1 cut(s) | 58 |
| CviAII | CATG | 4 cut(s) | 23, 47, 177, 185 |
| CviJI | RGCY | 1 cut(s) | 89 |
| CviKI_1 | RGCY | 1 cut(s) | 89 |
| CviQI | GTAC | 1 cut(s) | 58 |
| DdeI | CTNAG | 1 cut(s) | 17 |
| DpnI | GATC | 2 cut(s) | 15, 189 |
| DpnII | GATC | 2 cut(s) | 13, 187 |
| Eco31I | GGTCTC | 1 cut(s) | 122 |
| Eco57I | CTGAAG | 1 cut(s) | 50 |
| FaeI | CATG | 4 cut(s) | 26, 50, 180, 188 |
| FaiI | YATR | 8 cut(s) | 6, 24, 48, 144, 178, 186, 210, 234 |
| FatI | CATG | 4 cut(s) | 22, 46, 176, 184 |
| Fnu4HI | GCNGC | 2 cut(s) | 90, 174 |
| FokI | GGATG | 1 cut(s) | 82 |
| Fsp4HI | GCNGC | 2 cut(s) | 90, 174 |
| GluI | GCNGC | 2 cut(s) | 90, 174 |
| Hin1II | CATG | 4 cut(s) | 26, 50, 180, 188 |
| HincII | GTYRAC | 1 cut(s) | 182 |
| HindII | GTYRAC | 1 cut(s) | 182 |
| HinfI | GANTC | 1 cut(s) | 103 |
| Hpy166II | GTNNAC | 1 cut(s) | 182 |
| Hpy188I | TCNGA | 1 cut(s) | 20 |
| Hpy188III | TCNNGA | 2 cut(s) | 159, 243 |
| Hpy8I | GTNNAC | 1 cut(s) | 182 |
| HpyCH4V | TGCA | 3 cut(s) | 92, 173, 203 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 152, 200 |
| HpyF3I | CTNAG | 1 cut(s) | 17 |
| Hsp92II | CATG | 4 cut(s) | 26, 50, 180, 188 |
| Kzo9I | GATC | 2 cut(s) | 13, 187 |
| LpnPI | CCDG | 4 cut(s) | 134, 138, 204, 213 |
| Lsp1109I | GCAGC | 2 cut(s) | 76, 185 |
| LweI | GCATC | 2 cut(s) | 49, 164 |
| MalI | GATC | 2 cut(s) | 15, 189 |
| MboI | GATC | 2 cut(s) | 13, 187 |
| MboII | GAAGA | 2 cut(s) | 43, 46 |
| MflI | RGATCY | 1 cut(s) | 13 |
| MluCI | AATT | 1 cut(s) | 62 |
| MlyI | GAGTC | 1 cut(s) | 112 |
| MnlI | CCTC | 2 cut(s) | 92, 106 |
| MslI | CAYNNNNRTG | 1 cut(s) | 45 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 152, 200 |
| NdeII | GATC | 2 cut(s) | 13, 187 |
| NlaIII | CATG | 4 cut(s) | 26, 50, 180, 188 |
| NspI | RCATGY | 2 cut(s) | 26, 180 |
| PciI | ACATGT | 1 cut(s) | 22 |
| PkrI | GCNGC | 2 cut(s) | 91, 175 |
| PleI | GAGTC | 1 cut(s) | 111 |
| PpsI | GAGTC | 1 cut(s) | 111 |
| PscI | ACATGT | 1 cut(s) | 22 |
| PstI | CTGCAG | 1 cut(s) | 205 |
| PsuI | RGATCY | 1 cut(s) | 13 |
| RsaI | GTAC | 1 cut(s) | 59 |
| RsaNI | GTAC | 1 cut(s) | 58 |
| RseI | CAYNNNNRTG | 1 cut(s) | 45 |
| SatI | GCNGC | 2 cut(s) | 90, 174 |
| Sau3AI | GATC | 2 cut(s) | 13, 187 |
| SchI | GAGTC | 1 cut(s) | 112 |
| SetI | ASST | 3 cut(s) | 84, 91, 218 |
| SfaNI | GCATC | 2 cut(s) | 49, 164 |
| SfcI | CTRYAG | 2 cut(s) | 150, 201 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 45 |
| Sse9I | AATT | 1 cut(s) | 62 |
| TasI | AATT | 1 cut(s) | 62 |
| TseI | GCWGC | 2 cut(s) | 89, 173 |
| XceI | RCATGY | 2 cut(s) | 26, 180 |