Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G399000_v2.0.a1 |
| rosa_multiflora | Rmu_sc0002750.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 236, 251, 473 |
| AcuI | CTGAAG | 2 cut(s) | 24, 110 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 250, 251, 472, 473 |
| AgsI | TTSAA | 7 cut(s) | 65, 161, 323, 373, 517, 545, 595 |
| AluBI | AGCT | 4 cut(s) | 97, 211, 410, 433 |
| AluI | AGCT | 4 cut(s) | 97, 211, 410, 433 |
| Alw26I | GTCTC | 1 cut(s) | 65 |
| AoxI | GGCC | 3 cut(s) | 25, 402, 650 |
| ApeKI | GCWGC | 1 cut(s) | 94 |
| AspS9I | GGNCC | 2 cut(s) | 402, 651 |
| AsuHPI | GGTGA | 3 cut(s) | 281, 503, 638 |
| BbsI | GAAGAC | 1 cut(s) | 639 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BccI | CCATC | 3 cut(s) | 132, 253, 475 |
| BcoDI | GTCTC | 1 cut(s) | 65 |
| BfaI | CTAG | 1 cut(s) | 440 |
| BisI | GCNGC | 1 cut(s) | 95 |
| BlpI | GCTNAGC | 1 cut(s) | 217 |
| BlsI | GCNGC | 1 cut(s) | 96 |
| BmgT120I | GGNCC | 2 cut(s) | 402, 651 |
| BmsI | GCATC | 2 cut(s) | 100, 188 |
| BpiI | GAAGAC | 1 cut(s) | 639 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 217 |
| BsaJI | CCNNGG | 1 cut(s) | 203 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 181, 211, 345, 375, 403, 433, 567, 597 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 250, 251, 472, 473 |
| Bse1I | ACTGG | 1 cut(s) | 28 |
| BseDI | CCNNGG | 1 cut(s) | 203 |
| BseGI | GGATG | 2 cut(s) | 124, 179 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 250, 251, 472, 473 |
| BseMII | CTCAG | 1 cut(s) | 652 |
| BseNI | ACTGG | 1 cut(s) | 28 |
| BseRI | GAGGAG | 7 cut(s) | 346, 349, 352, 366, 571, 574, 588 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BshFI | GGCC | 3 cut(s) | 27, 404, 652 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 250, 251, 472, 473 |
| BsmAI | GTCTC | 1 cut(s) | 65 |
| BsnI | GGCC | 3 cut(s) | 27, 404, 652 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 217 |
| BspACI | CCGC | 3 cut(s) | 236, 251, 473 |
| BspANI | GGCC | 3 cut(s) | 27, 404, 652 |
| BspCNI | CTCAG | 1 cut(s) | 651 |
| BsrI | ACTGG | 1 cut(s) | 28 |
| BssECI | CCNNGG | 1 cut(s) | 203 |
| Bst6I | CTCTTC | 2 cut(s) | 290, 512 |
| BstC8I | GCNNGC | 1 cut(s) | 650 |
| BstDEI | CTNAG | 2 cut(s) | 217, 638 |
| BstDSI | CCRYGG | 1 cut(s) | 203 |
| BstF5I | GGATG | 2 cut(s) | 124, 179 |
| BstMAI | GTCTC | 1 cut(s) | 65 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 185 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| BstV2I | GAAGAC | 1 cut(s) | 639 |
| BsuRI | GGCC | 3 cut(s) | 27, 404, 652 |
| BtgI | CCRYGG | 1 cut(s) | 203 |
| BtsCI | GGATG | 2 cut(s) | 124, 179 |
| Cac8I | GCNNGC | 1 cut(s) | 650 |
| Cfr13I | GGNCC | 2 cut(s) | 402, 651 |
| CviAII | CATG | 1 cut(s) | 9 |
| CviJI | RGCY | 8 cut(s) | 27, 97, 188, 211, 404, 410, 433, 652 |
| CviKI_1 | RGCY | 8 cut(s) | 27, 97, 188, 211, 404, 410, 433, 652 |
| DdeI | CTNAG | 2 cut(s) | 217, 638 |
| Eam1104I | CTCTTC | 2 cut(s) | 290, 512 |
| EarI | CTCTTC | 2 cut(s) | 290, 512 |
| Eco57I | CTGAAG | 2 cut(s) | 24, 110 |
| FaeI | CATG | 1 cut(s) | 12 |
| FaiI | YATR | 7 cut(s) | 10, 60, 83, 185, 380, 407, 602 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 200, 232 |
| FatI | CATG | 1 cut(s) | 8 |
| FauI | CCCGC | 3 cut(s) | 243, 244, 466 |
| Fnu4HI | GCNGC | 1 cut(s) | 95 |
| FokI | GGATG | 2 cut(s) | 111, 166 |
| Fsp4HI | GCNGC | 1 cut(s) | 95 |
| FspBI | CTAG | 1 cut(s) | 440 |
| GluI | GCNGC | 1 cut(s) | 95 |
| HaeIII | GGCC | 3 cut(s) | 27, 404, 652 |
| Hin1II | CATG | 1 cut(s) | 12 |
| HincII | GTYRAC | 2 cut(s) | 21, 118 |
| HindII | GTYRAC | 2 cut(s) | 21, 118 |
| HinfI | GANTC | 2 cut(s) | 51, 77 |
| HpaI | GTTAAC | 1 cut(s) | 21 |
| HphI | GGTGA | 3 cut(s) | 281, 503, 638 |
| Hpy166II | GTNNAC | 2 cut(s) | 21, 118 |
| Hpy188I | TCNGA | 3 cut(s) | 43, 330, 641 |
| Hpy188III | TCNNGA | 2 cut(s) | 88, 128 |
| Hpy8I | GTNNAC | 2 cut(s) | 21, 118 |
| HpyAV | CCTTC | 3 cut(s) | 167, 317, 539 |
| HpyCH4V | TGCA | 4 cut(s) | 139, 228, 450, 648 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 185 |
| HpyF3I | CTNAG | 2 cut(s) | 217, 638 |
| Hsp92II | CATG | 1 cut(s) | 12 |
| KspAI | GTTAAC | 1 cut(s) | 21 |
| LpnPI | CCDG | 5 cut(s) | 9, 41, 101, 141, 634 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| LweI | GCATC | 2 cut(s) | 100, 188 |
| MaeI | CTAG | 1 cut(s) | 440 |
| MluCI | AATT | 1 cut(s) | 161 |
| MmeI | TCCRAC | 1 cut(s) | 308 |
| MseI | TTAA | 2 cut(s) | 20, 659 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 185 |
| NlaIII | CATG | 1 cut(s) | 12 |
| PfeI | GAWTC | 2 cut(s) | 51, 77 |
| PkrI | GCNGC | 1 cut(s) | 96 |
| PspPI | GGNCC | 2 cut(s) | 402, 651 |
| SaqAI | TTAA | 2 cut(s) | 20, 659 |
| SatI | GCNGC | 1 cut(s) | 95 |
| Sau96I | GGNCC | 2 cut(s) | 402, 651 |
| SfaNI | GCATC | 2 cut(s) | 100, 188 |
| Sse9I | AATT | 1 cut(s) | 161 |
| SsiI | CCGC | 3 cut(s) | 236, 251, 473 |
| SspMI | CTAG | 1 cut(s) | 440 |
| TasI | AATT | 1 cut(s) | 161 |
| TfiI | GAWTC | 2 cut(s) | 51, 77 |
| Tru1I | TTAA | 2 cut(s) | 20, 659 |
| Tru9I | TTAA | 2 cut(s) | 20, 659 |
| TseI | GCWGC | 1 cut(s) | 94 |
| TspGWI | ACGGA | 1 cut(s) | 220 |
| XspI | CTAG | 1 cut(s) | 440 |