Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0003252.1_g000016 Rmu_sc0038022.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2655 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 2789, 3115, 3575 |
| Acc65I | GGTACC | 1 cut(s) | 2585 |
| AccB1I | GGYRCC | 5 cut(s) | 2302, 2585, 3004, 3289, 3392 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3112 |
| AccBSI | CCGCTC | 1 cut(s) | 3676 |
| AccII | CGCG | 3 cut(s) | 2887, 3159, 3493 |
| AcoI | YGGCCR | 6 cut(s) | 1143, 2731, 2985, 3270, 3430, 3465 |
| AcsI | RAATTY | 2 cut(s) | 67, 1221 |
| AdeI | CACNNNGTG | 1 cut(s) | 92 |
| AfaI | GTAC | 8 cut(s) | 1713, 1786, 2319, 2478, 2581, 2587, 2598, 3765 |
| AflII | CTTAAG | 1 cut(s) | 1241 |
| AflIII | ACRYGT | 4 cut(s) | 2479, 2724, 3019, 3304 |
| AgeI | ACCGGT | 4 cut(s) | 2582, 3381, 3404, 3446 |
| AgsI | TTSAA | 9 cut(s) | 38, 204, 1321, 1498, 1511, 2165, 2337, 3601, 3683 |
| AjiI | CACGTC | 2 cut(s) | 3020, 3305 |
| AjnI | CCWGG | 6 cut(s) | 1701, 1924, 2221, 2298, 3387, 3802 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 1113, 1145, 2793, 2825, 2966, 2998, 3251, 3283 |
| Alw21I | GWGCWC | 1 cut(s) | 1962 |
| Alw26I | GTCTC | 6 cut(s) | 1201, 2314, 2705, 2852, 3167, 3500 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 83, 235, 1568, 2173, 3112 |
| ApoI | RAATTY | 2 cut(s) | 67, 1221 |
| AsiGI | ACCGGT | 4 cut(s) | 2582, 3381, 3404, 3446 |
| Asp718I | GGTACC | 1 cut(s) | 2585 |
| AspLEI | GCGC | 2 cut(s) | 2887, 3493 |
| AsuC2I | CCSGG | 1 cut(s) | 3753 |
| BaeGI | GKGCMC | 4 cut(s) | 1975, 3009, 3294, 3397 |
| BalI | TGGCCA | 3 cut(s) | 1145, 2987, 3272 |
| BanI | GGYRCC | 5 cut(s) | 2302, 2585, 3004, 3289, 3392 |
| BanII | GRGCYC | 1 cut(s) | 1962 |
| BauI | CACGAG | 2 cut(s) | 1999, 2195 |
| BbsI | GAAGAC | 1 cut(s) | 141 |
| Bbv12I | GWGCWC | 1 cut(s) | 1962 |
| BccI | CCATC | 9 cut(s) | 15, 115, 220, 1328, 1648, 2110, 2386, 2541, 3581 |
| BceAI | ACGGC | 6 cut(s) | 1275, 2219, 2718, 2897, 3044, 3182 |
| BciT130I | CCWGG | 6 cut(s) | 1703, 1926, 2223, 2300, 3389, 3804 |
| BciVI | GTATCC | 3 cut(s) | 277, 2940, 3225 |
| BcnI | CCSGG | 1 cut(s) | 3753 |
| BcoDI | GTCTC | 6 cut(s) | 1201, 2314, 2705, 2852, 3167, 3500 |
| BfaI | CTAG | 7 cut(s) | 218, 1253, 1580, 1602, 1715, 2247, 3666 |
| BfmI | CTRYAG | 4 cut(s) | 189, 1617, 1941, 2313 |
| BfrI | CTTAAG | 1 cut(s) | 1241 |
| BfuI | GTATCC | 3 cut(s) | 277, 2940, 3225 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1979 |
| BglII | AGATCT | 1 cut(s) | 1735 |
| BlpI | GCTNAGC | 1 cut(s) | 1961 |
| Bme1390I | CCNGG | 7 cut(s) | 1703, 1926, 2223, 2300, 3389, 3753, 3804 |
| BmgBI | CACGTC | 2 cut(s) | 3020, 3305 |
| BmiI | GGNNCC | 8 cut(s) | 2304, 2587, 2764, 3006, 3070, 3291, 3386, 3394 |
| BmrFI | CCNGG | 7 cut(s) | 1703, 1926, 2223, 2300, 3389, 3753, 3804 |
| BmrI | ACTGGG | 1 cut(s) | 3592 |
| BmsI | GCATC | 8 cut(s) | 1568, 1583, 1630, 1900, 2360, 3037, 3322, 3493 |
| BmuI | ACTGGG | 1 cut(s) | 3592 |
| BpiI | GAAGAC | 1 cut(s) | 141 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1363, 1395, 1920, 1952, 2754, 2786 |
| BpmI | CTGGAG | 2 cut(s) | 1797, 1947 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1233, 1707 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1961 |
| BpuMI | CCSGG | 1 cut(s) | 3753 |
| BsaAI | YACGTR | 1 cut(s) | 2321 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1161 |
| BsaI | GGTCTC | 2 cut(s) | 2852, 3167 |
| Bse118I | RCCGGY | 5 cut(s) | 2582, 2952, 3381, 3404, 3446 |
| Bse1I | ACTGG | 6 cut(s) | 1596, 2371, 2578, 2621, 3587, 3610 |
| Bse3DI | GCAATG | 2 cut(s) | 1871, 2127 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1161 |
| BseBI | CCWGG | 6 cut(s) | 1703, 1926, 2223, 2300, 3389, 3804 |
| BseGI | GGATG | 7 cut(s) | 130, 2121, 2378, 2531, 3052, 3337, 3592 |
| BseJI | GATNNNNATC | 1 cut(s) | 1161 |
| BseMI | GCAATG | 2 cut(s) | 1871, 2127 |
| BseNI | ACTGG | 6 cut(s) | 1596, 2371, 2578, 2621, 3587, 3610 |
| BseRI | GAGGAG | 7 cut(s) | 1208, 1211, 2000, 2977, 3044, 3262, 3329 |
| BseSI | GKGCMC | 4 cut(s) | 1975, 3009, 3294, 3397 |
| BseX3I | CGGCCG | 1 cut(s) | 3465 |
| BseYI | CCCAGC | 1 cut(s) | 3055 |
| BsgI | GTGCAG | 2 cut(s) | 69, 3805 |
| Bsh1236I | CGCG | 3 cut(s) | 2887, 3159, 3493 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3468 |
| BshNI | GGYRCC | 5 cut(s) | 2302, 2585, 3004, 3289, 3392 |
| BshTI | ACCGGT | 4 cut(s) | 2582, 3381, 3404, 3446 |
| BsiEI | CGRYCG | 1 cut(s) | 3468 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1962 |
| BslFI | GGGAC | 1 cut(s) | 3581 |
| BsmAI | GTCTC | 6 cut(s) | 1201, 2314, 2705, 2852, 3167, 3500 |
| BsmBI | CGTCTC | 1 cut(s) | 3500 |
| BsmFI | GGGAC | 1 cut(s) | 3581 |
| Bso31I | GGTCTC | 2 cut(s) | 2852, 3167 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1962, 1975, 3009, 3294, 3397 |
| Bsp1407I | TGTACA | 2 cut(s) | 2476, 2596 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1961 |
| Bsp19I | CCATGG | 1 cut(s) | 1788 |
| BspFNI | CGCG | 3 cut(s) | 2887, 3159, 3493 |
| BspLI | GGNNCC | 8 cut(s) | 2304, 2587, 2764, 3006, 3070, 3291, 3386, 3394 |
| BspMAI | CTGCAG | 2 cut(s) | 193, 2317 |
| BspQI | GCTCTTC | 1 cut(s) | 3751 |
| BspT107I | GGYRCC | 5 cut(s) | 2302, 2585, 3004, 3289, 3392 |
| BspTI | CTTAAG | 1 cut(s) | 1241 |
| BspTNI | GGTCTC | 2 cut(s) | 2852, 3167 |
| BsrBI | CCGCTC | 1 cut(s) | 3676 |
| BsrDI | GCAATG | 2 cut(s) | 1871, 2127 |
| BsrFI | RCCGGY | 5 cut(s) | 2582, 2952, 3381, 3404, 3446 |
| BsrGI | TGTACA | 2 cut(s) | 2476, 2596 |
| BsrI | ACTGG | 6 cut(s) | 1596, 2371, 2578, 2621, 3587, 3610 |
| BssAI | RCCGGY | 5 cut(s) | 2582, 2952, 3381, 3404, 3446 |
| BssSI | CACGAG | 2 cut(s) | 1999, 2195 |
| BssT1I | CCWWGG | 5 cut(s) | 1146, 1788, 2037, 2142, 2255 |
| Bst2BI | CACGAG | 2 cut(s) | 1999, 2195 |
| Bst2UI | CCWGG | 6 cut(s) | 1703, 1926, 2223, 2300, 3389, 3804 |
| BstAFI | CTTAAG | 1 cut(s) | 1241 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 92, 1403, 3355, 3654 |
| BstAUI | TGTACA | 2 cut(s) | 2476, 2596 |
| BstBAI | YACGTR | 1 cut(s) | 2321 |
| BstDSI | CCRYGG | 3 cut(s) | 1788, 2842, 3157 |
| BstEII | GGTNACC | 4 cut(s) | 3377, 3407, 3442, 3449 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1104 |
| BstF5I | GGATG | 7 cut(s) | 130, 2121, 2378, 2531, 3052, 3337, 3592 |
| BstFNI | CGCG | 3 cut(s) | 2887, 3159, 3493 |
| BstHHI | GCGC | 2 cut(s) | 2887, 3493 |
| BstMAI | GTCTC | 6 cut(s) | 1201, 2314, 2705, 2852, 3167, 3500 |
| BstMCI | CGRYCG | 1 cut(s) | 3468 |
| BstNI | CCWGG | 6 cut(s) | 1703, 1926, 2223, 2300, 3389, 3804 |
| BstNSI | RCATGY | 3 cut(s) | 2483, 2693, 2728 |
| BstPI | GGTNACC | 4 cut(s) | 3377, 3407, 3442, 3449 |
| BstSCI | CCNGG | 7 cut(s) | 1701, 1924, 2221, 2298, 3387, 3751, 3802 |
| BstSFI | CTRYAG | 4 cut(s) | 189, 1617, 1941, 2313 |
| BstSLI | GKGCMC | 4 cut(s) | 1975, 3009, 3294, 3397 |
| BstUI | CGCG | 3 cut(s) | 2887, 3159, 3493 |
| BstV2I | GAAGAC | 1 cut(s) | 141 |
| BstX2I | RGATCY | 3 cut(s) | 207, 1237, 1735 |
| BstYI | RGATCY | 3 cut(s) | 207, 1237, 1735 |
| BstZI | CGGCCG | 1 cut(s) | 3465 |
| BsuI | GTATCC | 3 cut(s) | 277, 2940, 3225 |
| BtgI | CCRYGG | 3 cut(s) | 1788, 2842, 3157 |
| BtrI | CACGTC | 2 cut(s) | 3020, 3305 |
| BtsCI | GGATG | 7 cut(s) | 130, 2121, 2378, 2531, 3052, 3337, 3592 |
| BtsI | GCAGTG | 1 cut(s) | 3643 |
| BtsIMutI | CAGTG | 8 cut(s) | 1336, 1569, 2364, 2472, 2571, 2628, 3643, 3716 |
| CaiI | CAGNNNCTG | 5 cut(s) | 83, 235, 1568, 2173, 3112 |
| CciNI | GCGGCCGC | 1 cut(s) | 3465 |
| CfoI | GCGC | 2 cut(s) | 2887, 3493 |
| Cfr10I | RCCGGY | 5 cut(s) | 2582, 2952, 3381, 3404, 3446 |
| Cfr42I | CCGCGG | 1 cut(s) | 3160 |
| CseI | GACGC | 2 cut(s) | 2876, 3482 |
| CsiI | ACCWGGT | 1 cut(s) | 2221 |
| Csp6I | GTAC | 8 cut(s) | 1712, 1785, 2318, 2477, 2580, 2586, 2597, 3764 |
| CspAI | ACCGGT | 4 cut(s) | 2582, 3381, 3404, 3446 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2531, 2566 |
| CviQI | GTAC | 8 cut(s) | 1712, 1785, 2318, 2477, 2580, 2586, 2597, 3764 |
| DraI | TTTAAA | 1 cut(s) | 1284 |
| DraIII | CACNNNGTG | 1 cut(s) | 92 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 2789, 3115, 3575 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 2789, 3115, 3575 |
| EaeI | YGGCCR | 6 cut(s) | 1143, 2731, 2985, 3270, 3430, 3465 |
| EagI | CGGCCG | 1 cut(s) | 3465 |
| Ecl136II | GAGCTC | 1 cut(s) | 1960 |
| EclXI | CGGCCG | 1 cut(s) | 3465 |
| Eco130I | CCWWGG | 5 cut(s) | 1146, 1788, 2037, 2142, 2255 |
| Eco147I | AGGCCT | 3 cut(s) | 3039, 3324, 3535 |
| Eco24I | GRGCYC | 1 cut(s) | 1962 |
| Eco31I | GGTCTC | 2 cut(s) | 2852, 3167 |
| Eco32I | GATATC | 2 cut(s) | 2925, 3210 |
| Eco52I | CGGCCG | 1 cut(s) | 3465 |
| Eco53kI | GAGCTC | 1 cut(s) | 1960 |
| Eco91I | GGTNACC | 4 cut(s) | 3377, 3407, 3442, 3449 |
| EcoICRI | GAGCTC | 1 cut(s) | 1960 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1104 |
| EcoO65I | GGTNACC | 4 cut(s) | 3377, 3407, 3442, 3449 |
| EcoRI | GAATTC | 1 cut(s) | 67 |
| EcoRII | CCWGG | 6 cut(s) | 1701, 1924, 2221, 2298, 3387, 3802 |
| EcoRV | GATATC | 2 cut(s) | 2925, 3210 |
| EcoT14I | CCWWGG | 5 cut(s) | 1146, 1788, 2037, 2142, 2255 |
| EcoT22I | ATGCAT | 1 cut(s) | 2353 |
| EcoT38I | GRGCYC | 1 cut(s) | 1962 |
| ErhI | CCWWGG | 5 cut(s) | 1146, 1788, 2037, 2142, 2255 |
| Esp3I | CGTCTC | 1 cut(s) | 3500 |
| FaqI | GGGAC | 1 cut(s) | 3581 |
| FauI | CCCGC | 3 cut(s) | 1912, 2437, 2812 |
| FokI | GGATG | 7 cut(s) | 117, 2128, 2365, 2538, 3059, 3344, 3599 |
| FriOI | GRGCYC | 1 cut(s) | 1962 |
| FspBI | CTAG | 7 cut(s) | 218, 1253, 1580, 1602, 1715, 2247, 3666 |
| GlaI | GCGC | 2 cut(s) | 2886, 3492 |
| GsaI | CCCAGC | 1 cut(s) | 3059 |
| GsuI | CTGGAG | 2 cut(s) | 1797, 1947 |
| HgaI | GACGC | 2 cut(s) | 2876, 3482 |
| HhaI | GCGC | 2 cut(s) | 2887, 3493 |
| Hin6I | GCGC | 2 cut(s) | 2885, 3491 |
| HinP1I | GCGC | 2 cut(s) | 2885, 3491 |
| HindIII | AAGCTT | 2 cut(s) | 2056, 2210 |
| HpaI | GTTAAC | 1 cut(s) | 2631 |
| Hpy99I | CGWCG | 4 cut(s) | 2208, 2898, 3346, 3515 |
| HpyCH4IV | ACGT | 5 cut(s) | 1969, 2320, 2896, 3019, 3304 |
| HpySE526I | ACGT | 5 cut(s) | 1969, 2320, 2896, 3019, 3304 |
| HspAI | GCGC | 2 cut(s) | 2885, 3491 |
| KpnI | GGTACC | 1 cut(s) | 2589 |
| KspAI | GTTAAC | 1 cut(s) | 2631 |
| KspI | CCGCGG | 1 cut(s) | 3160 |
| LguI | GCTCTTC | 1 cut(s) | 3751 |
| LweI | GCATC | 8 cut(s) | 1568, 1583, 1630, 1900, 2360, 3037, 3322, 3493 |
| MabI | ACCWGGT | 1 cut(s) | 2221 |
| MaeI | CTAG | 7 cut(s) | 218, 1253, 1580, 1602, 1715, 2247, 3666 |
| MaeII | ACGT | 5 cut(s) | 1969, 2320, 2896, 3019, 3304 |
| MbiI | CCGCTC | 1 cut(s) | 3676 |
| MfeI | CAATTG | 2 cut(s) | 1455, 3793 |
| MflI | RGATCY | 3 cut(s) | 207, 1237, 1735 |
| MhlI | GDGCHC | 5 cut(s) | 1962, 1975, 3009, 3294, 3397 |
| MlsI | TGGCCA | 3 cut(s) | 1145, 2987, 3272 |
| MluNI | TGGCCA | 3 cut(s) | 1145, 2987, 3272 |
| MlyI | GAGTC | 3 cut(s) | 2051, 2777, 3103 |
| Mox20I | TGGCCA | 3 cut(s) | 1145, 2987, 3272 |
| Mph1103I | ATGCAT | 1 cut(s) | 2353 |
| MscI | TGGCCA | 3 cut(s) | 1145, 2987, 3272 |
| MseI | TTAA | 8 cut(s) | 56, 161, 1212, 1242, 1283, 1475, 2630, 3561 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2501, 2694 |
| Msp20I | TGGCCA | 3 cut(s) | 1145, 2987, 3272 |
| MspA1I | CMGCKG | 6 cut(s) | 1907, 2012, 2807, 2882, 3159, 3769 |
| MspCI | CTTAAG | 1 cut(s) | 1241 |
| MspR9I | CCNGG | 7 cut(s) | 1703, 1926, 2223, 2300, 3389, 3753, 3804 |
| MunI | CAATTG | 2 cut(s) | 1455, 3793 |
| MvaI | CCWGG | 6 cut(s) | 1703, 1926, 2223, 2300, 3389, 3804 |
| MvnI | CGCG | 3 cut(s) | 2887, 3159, 3493 |
| NciI | CCSGG | 1 cut(s) | 3753 |
| NcoI | CCATGG | 1 cut(s) | 1788 |
| NlaIV | GGNNCC | 8 cut(s) | 2304, 2587, 2764, 3006, 3070, 3291, 3386, 3394 |
| NmeAIII | GCCGAG | 2 cut(s) | 1244, 1469 |
| NmuCI | GTSAC | 8 cut(s) | 2321, 2362, 2431, 2888, 3377, 3407, 3442, 3449 |
| NotI | GCGGCCGC | 1 cut(s) | 3465 |
| NsiI | ATGCAT | 1 cut(s) | 2353 |
| NspI | RCATGY | 3 cut(s) | 2483, 2693, 2728 |
| PaeI | GCATGC | 1 cut(s) | 2693 |
| PceI | AGGCCT | 3 cut(s) | 3039, 3324, 3535 |
| PciI | ACATGT | 2 cut(s) | 2479, 2724 |
| PciSI | GCTCTTC | 1 cut(s) | 3751 |
| PflFI | GACNNNGTC | 1 cut(s) | 1603 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3112 |
| PinAI | ACCGGT | 4 cut(s) | 2582, 3381, 3404, 3446 |
| PleI | GAGTC | 3 cut(s) | 2050, 2777, 3103 |
| PpsI | GAGTC | 3 cut(s) | 2050, 2777, 3103 |
| Ppu21I | YACGTR | 1 cut(s) | 2321 |
| PscI | ACATGT | 2 cut(s) | 2479, 2724 |
| PsiI | TTATAA | 1 cut(s) | 2655 |
| Psp124BI | GAGCTC | 1 cut(s) | 1962 |
| Psp6I | CCWGG | 6 cut(s) | 1701, 1924, 2221, 2298, 3387, 3802 |
| PspEI | GGTNACC | 4 cut(s) | 3377, 3407, 3442, 3449 |
| PspFI | CCCAGC | 1 cut(s) | 3055 |
| PspGI | CCWGG | 6 cut(s) | 1701, 1924, 2221, 2298, 3387, 3802 |
| PspN4I | GGNNCC | 8 cut(s) | 2304, 2587, 2764, 3006, 3070, 3291, 3386, 3394 |
| PstI | CTGCAG | 2 cut(s) | 193, 2317 |
| PstNI | CAGNNNCTG | 5 cut(s) | 83, 235, 1568, 2173, 3112 |
| PsuI | RGATCY | 3 cut(s) | 207, 1237, 1735 |
| PsyI | GACNNNGTC | 1 cut(s) | 1603 |
| RsaI | GTAC | 8 cut(s) | 1713, 1786, 2319, 2478, 2581, 2587, 2598, 3765 |
| RsaNI | GTAC | 8 cut(s) | 1712, 1785, 2318, 2477, 2580, 2586, 2597, 3764 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2501, 2694 |
| SacI | GAGCTC | 1 cut(s) | 1962 |
| SacII | CCGCGG | 1 cut(s) | 3160 |
| SapI | GCTCTTC | 1 cut(s) | 3751 |
| SaqAI | TTAA | 8 cut(s) | 56, 161, 1212, 1242, 1283, 1475, 2630, 3561 |
| SchI | GAGTC | 3 cut(s) | 2051, 2777, 3103 |
| ScrFI | CCNGG | 7 cut(s) | 1703, 1926, 2223, 2300, 3389, 3753, 3804 |
| SduI | GDGCHC | 5 cut(s) | 1962, 1975, 3009, 3294, 3397 |
| SexAI | ACCWGGT | 1 cut(s) | 2221 |
| SfaNI | GCATC | 8 cut(s) | 1568, 1583, 1630, 1900, 2360, 3037, 3322, 3493 |
| SfcI | CTRYAG | 4 cut(s) | 189, 1617, 1941, 2313 |
| Sfr303I | CCGCGG | 1 cut(s) | 3160 |
| SgrBI | CCGCGG | 1 cut(s) | 3160 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2501, 2694 |
| SmlI | CTYRAG | 1 cut(s) | 1241 |
| SmoI | CTYRAG | 1 cut(s) | 1241 |
| SphI | GCATGC | 1 cut(s) | 2693 |
| SseBI | AGGCCT | 3 cut(s) | 3039, 3324, 3535 |
| SspMI | CTAG | 7 cut(s) | 218, 1253, 1580, 1602, 1715, 2247, 3666 |
| SstI | GAGCTC | 1 cut(s) | 1962 |
| StuI | AGGCCT | 3 cut(s) | 3039, 3324, 3535 |
| StyD4I | CCNGG | 7 cut(s) | 1701, 1924, 2221, 2298, 3387, 3751, 3802 |
| StyI | CCWWGG | 5 cut(s) | 1146, 1788, 2037, 2142, 2255 |
| TaiI | ACGT | 5 cut(s) | 1972, 2323, 2899, 3022, 3307 |
| TatI | WGTACW | 3 cut(s) | 2476, 2596, 3763 |
| TauI | GCSGC | 7 cut(s) | 2012, 3361, 3467, 3470, 3491, 3772, 3818 |
| Tru1I | TTAA | 8 cut(s) | 56, 161, 1212, 1242, 1283, 1475, 2630, 3561 |
| Tru9I | TTAA | 8 cut(s) | 56, 161, 1212, 1242, 1283, 1475, 2630, 3561 |
| TscAI | CASTG | 8 cut(s) | 1336, 1569, 2371, 2479, 2578, 2628, 3643, 3723 |
| TseFI | GTSAC | 8 cut(s) | 2321, 2362, 2431, 2888, 3377, 3407, 3442, 3449 |
| Tsp45I | GTSAC | 8 cut(s) | 2321, 2362, 2431, 2888, 3377, 3407, 3442, 3449 |
| TspDTI | ATGAA | 2 cut(s) | 1643, 2604 |
| TspGWI | ACGGA | 1 cut(s) | 135 |
| TspRI | CASTG | 8 cut(s) | 1336, 1569, 2371, 2479, 2578, 2628, 3643, 3723 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1603 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3112 |
| Vha464I | CTTAAG | 1 cut(s) | 1241 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1104 |
| XapI | RAATTY | 2 cut(s) | 67, 1221 |
| XbaI | TCTAGA | 3 cut(s) | 217, 1579, 3665 |
| XceI | RCATGY | 3 cut(s) | 2483, 2693, 2728 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1651 |
| XspI | CTAG | 7 cut(s) | 218, 1253, 1580, 1602, 1715, 2247, 3666 |
| Zsp2I | ATGCAT | 1 cut(s) | 2353 |