Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003252.1

Orthogroup ID

OG0031257

Physical Location & Seq

Genomic Coordinates Forward (+)

62356 .. 68693

Gene Structure 6338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3840 bp

atgttccatctccggcacaaaatcaactacatcgttgaaagtgatagtcatttgttaaagaacgagaattctaaaccagaggctgcacaaagtgcttctgatgttccatctccggcacaaaatcaactacatccaacagataatccgtcttctacctcattaacaatagaaaatggtaaattaccaactgcagaacaggcttcaaagatcccatctctagagcaaaaccagcctctgccaacagataccacagcctcacagtcgacagttacagttactcaggatactctgaagaaagattctggtcctaaagatgttgacccattattacaacaaaaccagcctcttccaacagataccacagcctcacagtcaacagttacagttactcaggaaactctgaagaaagattctggtcctaaagatgtcgacccgttattacaacaaaaccagcctcttccaacagataccacagcctcacagtcgacagttacagttactcaggaaactctgaagaaagattctggtcctaaagatgtcgacccgttattacaacaaaaccagcctcttccaacagataccacagcctcacagtcgacagttacagttactcaggaaactctgaagaaagattctggtcctaaagatgtcgacccgttattacaacaaaaccagcctcttccaacagataccacagcctcacagtcgacagttacagttactcaggaaactctgaagaaagattctggtcctaaagatgtcgacccgttattacaacaaaaccagcctcttccaacagataccacagcctcacagtcgacagttacagttactcaggaaactctgaagaaagattctggtcctaaagatgtcgacccgttattacaacaaaaccagcctcttccaacagataccacagcctcacagtcgacagttacagttactcaggaaactctgaagaaagattctggtcctaaagatgtcgacccgttattacaacaaaaccagcctcttccaacagataccacagcctcacagtcgacagttacagttactcaggaaactctgaagaaagattctggtcctaaagatgtcgacccttactcaggagaagcagaggaacaaaggattggagcagtcatggccaaggaacaagattctcatcattgggaaaaggagataaagcaggcagaggaggagcttcagagacttaaccagcaaattctgtcagctaaggatcttaagtccaaactagacacggcctcggccttgcttcttgatttaaaagctgaattagctgcttatatggaatcaagattcaaggaggacagtgatggaggacaatcgaaagatgagcaagaaacaccggagaggaaaactcatactgatatacaagcagcagttgcttcagcaaagaaggagctggaagaagtgaagctcaacatagagaaagcaattgctgaagtaaattgcttaaaggtggctgcctcggcattgaagtctgaacttgaaagtgagaaatcagctcttgccaccattaggcaaagagaaggaatggcatcagtggctgtggcatctctagaagctgaactggacaggactaggtcagaaatagctgtagttcagatgaaggagaaagatgccagagagaagatggtggagctacccaaagagttgcagcaagcagcacaacaggctgaccaggctaaggtactagctaaaatggctgctgaagatctgcgtaaggcaaaagaagaagcagatcaagcaaaggctggagcaagtaccatggagagtagattattagcagcacagaaggaaatagaggctgcaagggcttctgaaaggttagcgttagcagcaatcaaagcattgcaggagagtgagcaagcccgatccacccccgctgatgctgattcaccgcctggagtaacactctctataggggagtattatgagctcagcaaacgtgcccatgaggcagaggagcaggcaaacacgagagttgccgctgcaagttccaaaattgaggcagccaaggagtctgagctgagaagcttggagaagttggaagaagtgagtagggaaatggcttcgagaaaagaagcactcaggatggcaatggagaaggctgagaaggccaaggaagggaaattgggtgttgaacaggagctgagaaagtggagagccgaacacgagcaacgacgaaagcttggtgaacctggtcaggcagccgtaaaccccactagaagcccaaggggtagttttgagggagtgaaagattctaaaggctttgaccaggcacctgtctctgcagtacgtgacccttatggttcaatccccaaccatgcatcaggaaatgtcactggaagtgagccatccccccaagaagtaaagggtggaaagaagaagaagaaggcgatttccagagtgactgtaaatgcgggatttgatctgacagattattacttcactgtacatgtcgacattgtttccacctccatgcaagttgaggctaatgttggatgttgcaagcgaggccaacgatggtggggttggcatagaagcaacactggcagtaccggtacccatgatgtacaaggctctcggtgttcatgtccagtgaggttaacggtaggcaaggtaaatgattataataatgggcatatcaacaaggctaacaatgggcatgctcatgcctatacaaatgagactaaggggaacatgtctggccgtttccggctgcgtggatcgagtgccggagcctacctctctcttccagactccggtgtcgaggaccaacccgctgttcttgcccagattccggcgttcgatccactccacggtctctttgccctcaccgagcgttcgatccactccgctgcgcgtcaccgacgttcgatccactctgccgttgctccgatatcgtatcctccaatgctaaatgcaggccggtggcagaggagaaaggagaaagatgatttggccaatttcgcagctccggtgcccaaatcaggacgtgtaatggaggaggaaggcctctgggatgctgacccagccgtttccggctccggcactcgatccacgcagcctacctctctcttccagactctggtgtcgaggaccaaccagccgattccggcgttcgatccactccgcggtctccttgccctcaccgagcgttcgatccactctgccgttgctccgatatcgtatcctccaatgctaaatgcaggctggtggcagaggagaaaggagaaagatgatttggccaatttcgcagctccggtgcccaaatcaggacgtgtaatggaggaggaaggcctctgggatgctgacccgtcgtggcagaagttgccgcaccggaggattagaggtcaccggttcctgggtgcccagattaccggtgaccggattccggcaaaagttggccggattccggtgaccggtgaccggattcaggcggccgccttcgtcctctgtccggcggcgcgtctcggtgatgctgtcgtcggacgggcttgttttcagaggcctattttggctgcttggcttcgggttaagggggacgatagggtcaactgggatgggatttccttcaagactggatcagaatggcgtgcggtggtagttggcagtgggtggagcaagcggtgcgaggaatctagatcggagcggattgaatctgggatcattgtggtcttgggaggggcgacactgacggggtgggggtatggctatggtggcacaccgggaagagcagtacagcggcggtgggaggtgtgcagaggcaattgtgggcctggctcatgggccgcatatctctccttgcaatcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016020 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

1279

Amino Acids

139.29

Weight (kDa)

6.24

Isoelectric Point (pI)

48.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	371 - 735	4.6e-153	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0031257)

Species	Orthologous Gene IDs
rosa_multiflora	Rmu_sc0003252.1_g000016 Rmu_sc0038022.1_g000001

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2655
AasI	GACNNNNNNGTC	3 cut(s)	2789, 3115, 3575
Acc65I	GGTACC	1 cut(s)	2585
AccB1I	GGYRCC	5 cut(s)	2302, 2585, 3004, 3289, 3392
AccB7I	CCANNNNNTGG	1 cut(s)	3112
AccBSI	CCGCTC	1 cut(s)	3676
AccII	CGCG	3 cut(s)	2887, 3159, 3493
AcoI	YGGCCR	6 cut(s)	1143, 2731, 2985, 3270, 3430, 3465
AcsI	RAATTY	2 cut(s)	67, 1221
AdeI	CACNNNGTG	1 cut(s)	92
AfaI	GTAC	8 cut(s)	1713, 1786, 2319, 2478, 2581, 2587, 2598, 3765
AflII	CTTAAG	1 cut(s)	1241
AflIII	ACRYGT	4 cut(s)	2479, 2724, 3019, 3304
AgeI	ACCGGT	4 cut(s)	2582, 3381, 3404, 3446
AgsI	TTSAA	9 cut(s)	38, 204, 1321, 1498, 1511, 2165, 2337, 3601, 3683
AjiI	CACGTC	2 cut(s)	3020, 3305
AjnI	CCWGG	6 cut(s)	1701, 1924, 2221, 2298, 3387, 3802
AjuI	GAANNNNNNNTTGG	8 cut(s)	1113, 1145, 2793, 2825, 2966, 2998, 3251, 3283
Alw21I	GWGCWC	1 cut(s)	1962
Alw26I	GTCTC	6 cut(s)	1201, 2314, 2705, 2852, 3167, 3500
AlwNI	CAGNNNCTG	5 cut(s)	83, 235, 1568, 2173, 3112
ApoI	RAATTY	2 cut(s)	67, 1221
AsiGI	ACCGGT	4 cut(s)	2582, 3381, 3404, 3446
Asp718I	GGTACC	1 cut(s)	2585
AspLEI	GCGC	2 cut(s)	2887, 3493
AsuC2I	CCSGG	1 cut(s)	3753
BaeGI	GKGCMC	4 cut(s)	1975, 3009, 3294, 3397
BalI	TGGCCA	3 cut(s)	1145, 2987, 3272
BanI	GGYRCC	5 cut(s)	2302, 2585, 3004, 3289, 3392
BanII	GRGCYC	1 cut(s)	1962
BauI	CACGAG	2 cut(s)	1999, 2195
BbsI	GAAGAC	1 cut(s)	141
Bbv12I	GWGCWC	1 cut(s)	1962
BccI	CCATC	9 cut(s)	15, 115, 220, 1328, 1648, 2110, 2386, 2541, 3581
BceAI	ACGGC	6 cut(s)	1275, 2219, 2718, 2897, 3044, 3182
BciT130I	CCWGG	6 cut(s)	1703, 1926, 2223, 2300, 3389, 3804
BciVI	GTATCC	3 cut(s)	277, 2940, 3225
BcnI	CCSGG	1 cut(s)	3753
BcoDI	GTCTC	6 cut(s)	1201, 2314, 2705, 2852, 3167, 3500
BfaI	CTAG	7 cut(s)	218, 1253, 1580, 1602, 1715, 2247, 3666
BfmI	CTRYAG	4 cut(s)	189, 1617, 1941, 2313
BfrI	CTTAAG	1 cut(s)	1241
BfuI	GTATCC	3 cut(s)	277, 2940, 3225
BglI	GCCNNNNNGGC	1 cut(s)	1979
BglII	AGATCT	1 cut(s)	1735
BlpI	GCTNAGC	1 cut(s)	1961
Bme1390I	CCNGG	7 cut(s)	1703, 1926, 2223, 2300, 3389, 3753, 3804
BmgBI	CACGTC	2 cut(s)	3020, 3305
BmiI	GGNNCC	8 cut(s)	2304, 2587, 2764, 3006, 3070, 3291, 3386, 3394
BmrFI	CCNGG	7 cut(s)	1703, 1926, 2223, 2300, 3389, 3753, 3804
BmrI	ACTGGG	1 cut(s)	3592
BmsI	GCATC	8 cut(s)	1568, 1583, 1630, 1900, 2360, 3037, 3322, 3493
BmuI	ACTGGG	1 cut(s)	3592
BpiI	GAAGAC	1 cut(s)	141
BplI	GAGNNNNNCTC	6 cut(s)	1363, 1395, 1920, 1952, 2754, 2786
BpmI	CTGGAG	2 cut(s)	1797, 1947
Bpu10I	CCTNAGC	2 cut(s)	1233, 1707
Bpu1102I	GCTNAGC	1 cut(s)	1961
BpuMI	CCSGG	1 cut(s)	3753
BsaAI	YACGTR	1 cut(s)	2321
BsaBI	GATNNNNATC	1 cut(s)	1161
BsaI	GGTCTC	2 cut(s)	2852, 3167
Bse118I	RCCGGY	5 cut(s)	2582, 2952, 3381, 3404, 3446
Bse1I	ACTGG	6 cut(s)	1596, 2371, 2578, 2621, 3587, 3610
Bse3DI	GCAATG	2 cut(s)	1871, 2127
Bse8I	GATNNNNATC	1 cut(s)	1161
BseBI	CCWGG	6 cut(s)	1703, 1926, 2223, 2300, 3389, 3804
BseGI	GGATG	7 cut(s)	130, 2121, 2378, 2531, 3052, 3337, 3592
BseJI	GATNNNNATC	1 cut(s)	1161
BseMI	GCAATG	2 cut(s)	1871, 2127
BseNI	ACTGG	6 cut(s)	1596, 2371, 2578, 2621, 3587, 3610
BseRI	GAGGAG	7 cut(s)	1208, 1211, 2000, 2977, 3044, 3262, 3329
BseSI	GKGCMC	4 cut(s)	1975, 3009, 3294, 3397
BseX3I	CGGCCG	1 cut(s)	3465
BseYI	CCCAGC	1 cut(s)	3055
BsgI	GTGCAG	2 cut(s)	69, 3805
Bsh1236I	CGCG	3 cut(s)	2887, 3159, 3493
Bsh1285I	CGRYCG	1 cut(s)	3468
BshNI	GGYRCC	5 cut(s)	2302, 2585, 3004, 3289, 3392
BshTI	ACCGGT	4 cut(s)	2582, 3381, 3404, 3446
BsiEI	CGRYCG	1 cut(s)	3468
BsiHKAI	GWGCWC	1 cut(s)	1962
BslFI	GGGAC	1 cut(s)	3581
BsmAI	GTCTC	6 cut(s)	1201, 2314, 2705, 2852, 3167, 3500
BsmBI	CGTCTC	1 cut(s)	3500
BsmFI	GGGAC	1 cut(s)	3581
Bso31I	GGTCTC	2 cut(s)	2852, 3167
Bsp1286I	GDGCHC	5 cut(s)	1962, 1975, 3009, 3294, 3397
Bsp1407I	TGTACA	2 cut(s)	2476, 2596
Bsp1720I	GCTNAGC	1 cut(s)	1961
Bsp19I	CCATGG	1 cut(s)	1788
BspFNI	CGCG	3 cut(s)	2887, 3159, 3493
BspLI	GGNNCC	8 cut(s)	2304, 2587, 2764, 3006, 3070, 3291, 3386, 3394
BspMAI	CTGCAG	2 cut(s)	193, 2317
BspQI	GCTCTTC	1 cut(s)	3751
BspT107I	GGYRCC	5 cut(s)	2302, 2585, 3004, 3289, 3392
BspTI	CTTAAG	1 cut(s)	1241
BspTNI	GGTCTC	2 cut(s)	2852, 3167
BsrBI	CCGCTC	1 cut(s)	3676
BsrDI	GCAATG	2 cut(s)	1871, 2127
BsrFI	RCCGGY	5 cut(s)	2582, 2952, 3381, 3404, 3446
BsrGI	TGTACA	2 cut(s)	2476, 2596
BsrI	ACTGG	6 cut(s)	1596, 2371, 2578, 2621, 3587, 3610
BssAI	RCCGGY	5 cut(s)	2582, 2952, 3381, 3404, 3446
BssSI	CACGAG	2 cut(s)	1999, 2195
BssT1I	CCWWGG	5 cut(s)	1146, 1788, 2037, 2142, 2255
Bst2BI	CACGAG	2 cut(s)	1999, 2195
Bst2UI	CCWGG	6 cut(s)	1703, 1926, 2223, 2300, 3389, 3804
BstAFI	CTTAAG	1 cut(s)	1241
BstAPI	GCANNNNNTGC	4 cut(s)	92, 1403, 3355, 3654
BstAUI	TGTACA	2 cut(s)	2476, 2596
BstBAI	YACGTR	1 cut(s)	2321
BstDSI	CCRYGG	3 cut(s)	1788, 2842, 3157
BstEII	GGTNACC	4 cut(s)	3377, 3407, 3442, 3449
BstENI	CCTNNNNNAGG	1 cut(s)	1104
BstF5I	GGATG	7 cut(s)	130, 2121, 2378, 2531, 3052, 3337, 3592
BstFNI	CGCG	3 cut(s)	2887, 3159, 3493
BstHHI	GCGC	2 cut(s)	2887, 3493
BstMAI	GTCTC	6 cut(s)	1201, 2314, 2705, 2852, 3167, 3500
BstMCI	CGRYCG	1 cut(s)	3468
BstNI	CCWGG	6 cut(s)	1703, 1926, 2223, 2300, 3389, 3804
BstNSI	RCATGY	3 cut(s)	2483, 2693, 2728
BstPI	GGTNACC	4 cut(s)	3377, 3407, 3442, 3449
BstSCI	CCNGG	7 cut(s)	1701, 1924, 2221, 2298, 3387, 3751, 3802
BstSFI	CTRYAG	4 cut(s)	189, 1617, 1941, 2313
BstSLI	GKGCMC	4 cut(s)	1975, 3009, 3294, 3397
BstUI	CGCG	3 cut(s)	2887, 3159, 3493
BstV2I	GAAGAC	1 cut(s)	141
BstX2I	RGATCY	3 cut(s)	207, 1237, 1735
BstYI	RGATCY	3 cut(s)	207, 1237, 1735
BstZI	CGGCCG	1 cut(s)	3465
BsuI	GTATCC	3 cut(s)	277, 2940, 3225
BtgI	CCRYGG	3 cut(s)	1788, 2842, 3157
BtrI	CACGTC	2 cut(s)	3020, 3305
BtsCI	GGATG	7 cut(s)	130, 2121, 2378, 2531, 3052, 3337, 3592
BtsI	GCAGTG	1 cut(s)	3643
BtsIMutI	CAGTG	8 cut(s)	1336, 1569, 2364, 2472, 2571, 2628, 3643, 3716
CaiI	CAGNNNCTG	5 cut(s)	83, 235, 1568, 2173, 3112
CciNI	GCGGCCGC	1 cut(s)	3465
CfoI	GCGC	2 cut(s)	2887, 3493
Cfr10I	RCCGGY	5 cut(s)	2582, 2952, 3381, 3404, 3446
Cfr42I	CCGCGG	1 cut(s)	3160
CseI	GACGC	2 cut(s)	2876, 3482
CsiI	ACCWGGT	1 cut(s)	2221
Csp6I	GTAC	8 cut(s)	1712, 1785, 2318, 2477, 2580, 2586, 2597, 3764
CspAI	ACCGGT	4 cut(s)	2582, 3381, 3404, 3446
CspCI	CAANNNNNGTGG	2 cut(s)	2531, 2566
CviQI	GTAC	8 cut(s)	1712, 1785, 2318, 2477, 2580, 2586, 2597, 3764
DraI	TTTAAA	1 cut(s)	1284
DraIII	CACNNNGTG	1 cut(s)	92
DrdI	GACNNNNNNGTC	3 cut(s)	2789, 3115, 3575
DseDI	GACNNNNNNGTC	3 cut(s)	2789, 3115, 3575
EaeI	YGGCCR	6 cut(s)	1143, 2731, 2985, 3270, 3430, 3465
EagI	CGGCCG	1 cut(s)	3465
Ecl136II	GAGCTC	1 cut(s)	1960
EclXI	CGGCCG	1 cut(s)	3465
Eco130I	CCWWGG	5 cut(s)	1146, 1788, 2037, 2142, 2255
Eco147I	AGGCCT	3 cut(s)	3039, 3324, 3535
Eco24I	GRGCYC	1 cut(s)	1962
Eco31I	GGTCTC	2 cut(s)	2852, 3167
Eco32I	GATATC	2 cut(s)	2925, 3210
Eco52I	CGGCCG	1 cut(s)	3465
Eco53kI	GAGCTC	1 cut(s)	1960
Eco91I	GGTNACC	4 cut(s)	3377, 3407, 3442, 3449
EcoICRI	GAGCTC	1 cut(s)	1960
EcoNI	CCTNNNNNAGG	1 cut(s)	1104
EcoO65I	GGTNACC	4 cut(s)	3377, 3407, 3442, 3449
EcoRI	GAATTC	1 cut(s)	67
EcoRII	CCWGG	6 cut(s)	1701, 1924, 2221, 2298, 3387, 3802
EcoRV	GATATC	2 cut(s)	2925, 3210
EcoT14I	CCWWGG	5 cut(s)	1146, 1788, 2037, 2142, 2255
EcoT22I	ATGCAT	1 cut(s)	2353
EcoT38I	GRGCYC	1 cut(s)	1962
ErhI	CCWWGG	5 cut(s)	1146, 1788, 2037, 2142, 2255
Esp3I	CGTCTC	1 cut(s)	3500
FaqI	GGGAC	1 cut(s)	3581
FauI	CCCGC	3 cut(s)	1912, 2437, 2812
FokI	GGATG	7 cut(s)	117, 2128, 2365, 2538, 3059, 3344, 3599
FriOI	GRGCYC	1 cut(s)	1962
FspBI	CTAG	7 cut(s)	218, 1253, 1580, 1602, 1715, 2247, 3666
GlaI	GCGC	2 cut(s)	2886, 3492
GsaI	CCCAGC	1 cut(s)	3059
GsuI	CTGGAG	2 cut(s)	1797, 1947
HgaI	GACGC	2 cut(s)	2876, 3482
HhaI	GCGC	2 cut(s)	2887, 3493
Hin6I	GCGC	2 cut(s)	2885, 3491
HinP1I	GCGC	2 cut(s)	2885, 3491
HindIII	AAGCTT	2 cut(s)	2056, 2210
HpaI	GTTAAC	1 cut(s)	2631
Hpy99I	CGWCG	4 cut(s)	2208, 2898, 3346, 3515
HpyCH4IV	ACGT	5 cut(s)	1969, 2320, 2896, 3019, 3304
HpySE526I	ACGT	5 cut(s)	1969, 2320, 2896, 3019, 3304
HspAI	GCGC	2 cut(s)	2885, 3491
KpnI	GGTACC	1 cut(s)	2589
KspAI	GTTAAC	1 cut(s)	2631
KspI	CCGCGG	1 cut(s)	3160
LguI	GCTCTTC	1 cut(s)	3751
LweI	GCATC	8 cut(s)	1568, 1583, 1630, 1900, 2360, 3037, 3322, 3493
MabI	ACCWGGT	1 cut(s)	2221
MaeI	CTAG	7 cut(s)	218, 1253, 1580, 1602, 1715, 2247, 3666
MaeII	ACGT	5 cut(s)	1969, 2320, 2896, 3019, 3304
MbiI	CCGCTC	1 cut(s)	3676
MfeI	CAATTG	2 cut(s)	1455, 3793
MflI	RGATCY	3 cut(s)	207, 1237, 1735
MhlI	GDGCHC	5 cut(s)	1962, 1975, 3009, 3294, 3397
MlsI	TGGCCA	3 cut(s)	1145, 2987, 3272
MluNI	TGGCCA	3 cut(s)	1145, 2987, 3272
MlyI	GAGTC	3 cut(s)	2051, 2777, 3103
Mox20I	TGGCCA	3 cut(s)	1145, 2987, 3272
Mph1103I	ATGCAT	1 cut(s)	2353
MscI	TGGCCA	3 cut(s)	1145, 2987, 3272
MseI	TTAA	8 cut(s)	56, 161, 1212, 1242, 1283, 1475, 2630, 3561
MslI	CAYNNNNRTG	2 cut(s)	2501, 2694
Msp20I	TGGCCA	3 cut(s)	1145, 2987, 3272
MspA1I	CMGCKG	6 cut(s)	1907, 2012, 2807, 2882, 3159, 3769
MspCI	CTTAAG	1 cut(s)	1241
MspR9I	CCNGG	7 cut(s)	1703, 1926, 2223, 2300, 3389, 3753, 3804
MunI	CAATTG	2 cut(s)	1455, 3793
MvaI	CCWGG	6 cut(s)	1703, 1926, 2223, 2300, 3389, 3804
MvnI	CGCG	3 cut(s)	2887, 3159, 3493
NciI	CCSGG	1 cut(s)	3753
NcoI	CCATGG	1 cut(s)	1788
NlaIV	GGNNCC	8 cut(s)	2304, 2587, 2764, 3006, 3070, 3291, 3386, 3394
NmeAIII	GCCGAG	2 cut(s)	1244, 1469
NmuCI	GTSAC	8 cut(s)	2321, 2362, 2431, 2888, 3377, 3407, 3442, 3449
NotI	GCGGCCGC	1 cut(s)	3465
NsiI	ATGCAT	1 cut(s)	2353
NspI	RCATGY	3 cut(s)	2483, 2693, 2728
PaeI	GCATGC	1 cut(s)	2693
PceI	AGGCCT	3 cut(s)	3039, 3324, 3535
PciI	ACATGT	2 cut(s)	2479, 2724
PciSI	GCTCTTC	1 cut(s)	3751
PflFI	GACNNNGTC	1 cut(s)	1603
PflMI	CCANNNNNTGG	1 cut(s)	3112
PinAI	ACCGGT	4 cut(s)	2582, 3381, 3404, 3446
PleI	GAGTC	3 cut(s)	2050, 2777, 3103
PpsI	GAGTC	3 cut(s)	2050, 2777, 3103
Ppu21I	YACGTR	1 cut(s)	2321
PscI	ACATGT	2 cut(s)	2479, 2724
PsiI	TTATAA	1 cut(s)	2655
Psp124BI	GAGCTC	1 cut(s)	1962
Psp6I	CCWGG	6 cut(s)	1701, 1924, 2221, 2298, 3387, 3802
PspEI	GGTNACC	4 cut(s)	3377, 3407, 3442, 3449
PspFI	CCCAGC	1 cut(s)	3055
PspGI	CCWGG	6 cut(s)	1701, 1924, 2221, 2298, 3387, 3802
PspN4I	GGNNCC	8 cut(s)	2304, 2587, 2764, 3006, 3070, 3291, 3386, 3394
PstI	CTGCAG	2 cut(s)	193, 2317
PstNI	CAGNNNCTG	5 cut(s)	83, 235, 1568, 2173, 3112
PsuI	RGATCY	3 cut(s)	207, 1237, 1735
PsyI	GACNNNGTC	1 cut(s)	1603
RsaI	GTAC	8 cut(s)	1713, 1786, 2319, 2478, 2581, 2587, 2598, 3765
RsaNI	GTAC	8 cut(s)	1712, 1785, 2318, 2477, 2580, 2586, 2597, 3764
RseI	CAYNNNNRTG	2 cut(s)	2501, 2694
SacI	GAGCTC	1 cut(s)	1962
SacII	CCGCGG	1 cut(s)	3160
SapI	GCTCTTC	1 cut(s)	3751
SaqAI	TTAA	8 cut(s)	56, 161, 1212, 1242, 1283, 1475, 2630, 3561
SchI	GAGTC	3 cut(s)	2051, 2777, 3103
ScrFI	CCNGG	7 cut(s)	1703, 1926, 2223, 2300, 3389, 3753, 3804
SduI	GDGCHC	5 cut(s)	1962, 1975, 3009, 3294, 3397
SexAI	ACCWGGT	1 cut(s)	2221
SfaNI	GCATC	8 cut(s)	1568, 1583, 1630, 1900, 2360, 3037, 3322, 3493
SfcI	CTRYAG	4 cut(s)	189, 1617, 1941, 2313
Sfr303I	CCGCGG	1 cut(s)	3160
SgrBI	CCGCGG	1 cut(s)	3160
SmiMI	CAYNNNNRTG	2 cut(s)	2501, 2694
SmlI	CTYRAG	1 cut(s)	1241
SmoI	CTYRAG	1 cut(s)	1241
SphI	GCATGC	1 cut(s)	2693
SseBI	AGGCCT	3 cut(s)	3039, 3324, 3535
SspMI	CTAG	7 cut(s)	218, 1253, 1580, 1602, 1715, 2247, 3666
SstI	GAGCTC	1 cut(s)	1962
StuI	AGGCCT	3 cut(s)	3039, 3324, 3535
StyD4I	CCNGG	7 cut(s)	1701, 1924, 2221, 2298, 3387, 3751, 3802
StyI	CCWWGG	5 cut(s)	1146, 1788, 2037, 2142, 2255
TaiI	ACGT	5 cut(s)	1972, 2323, 2899, 3022, 3307
TatI	WGTACW	3 cut(s)	2476, 2596, 3763
TauI	GCSGC	7 cut(s)	2012, 3361, 3467, 3470, 3491, 3772, 3818
Tru1I	TTAA	8 cut(s)	56, 161, 1212, 1242, 1283, 1475, 2630, 3561
Tru9I	TTAA	8 cut(s)	56, 161, 1212, 1242, 1283, 1475, 2630, 3561
TscAI	CASTG	8 cut(s)	1336, 1569, 2371, 2479, 2578, 2628, 3643, 3723
TseFI	GTSAC	8 cut(s)	2321, 2362, 2431, 2888, 3377, 3407, 3442, 3449
Tsp45I	GTSAC	8 cut(s)	2321, 2362, 2431, 2888, 3377, 3407, 3442, 3449
TspDTI	ATGAA	2 cut(s)	1643, 2604
TspGWI	ACGGA	1 cut(s)	135
TspRI	CASTG	8 cut(s)	1336, 1569, 2371, 2479, 2578, 2628, 3643, 3723
Tth111I	GACNNNGTC	1 cut(s)	1603
Van91I	CCANNNNNTGG	1 cut(s)	3112
Vha464I	CTTAAG	1 cut(s)	1241
XagI	CCTNNNNNAGG	1 cut(s)	1104
XapI	RAATTY	2 cut(s)	67, 1221
XbaI	TCTAGA	3 cut(s)	217, 1579, 3665
XceI	RCATGY	3 cut(s)	2483, 2693, 2728
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1651
XspI	CTAG	7 cut(s)	218, 1253, 1580, 1602, 1715, 2247, 3666
Zsp2I	ATGCAT	1 cut(s)	2353

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.