Rmu_sc0003499.1_g000029

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003499.1
OG0031268
Physical Location & Seq
Reverse (-)
113692 .. 114096
405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003499.1_g000029.1.cds

Sequence Viewer

Length: 405 bp
atgtcctttcttacattggttagttccttggctattggagcagataagcttatctgcataatggatggtccaattcttgatgagagtggacgtctgattcgtttcttgactcttgaagaagcagacaagttgattcgtcagcgggctaagcaaagtgaaatagccgctagctatgtgaaagctgttgatgaagaaaatctccattatcttggacatgatagtgggaattttcttaaggaaaagcatattccaaggtttaacaatggtgttggttttgagaatggcaatggattgtggtctggtgaacaaggttttgcaatagggggtcacgagcgccaaagtcgattaagcggttacctttcagaattggctgctgcagcctttgtttgcagggtaagaccataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

134

Amino Acids

14.75

Weight (kDa)

6.07

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0031268)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0003499.1_g000029
rosa_roxburghii Rroxscaffold_4G00319120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 94
AciI CCGC 3 cut(s) 142, 165, 351
AcsI RAATTY 1 cut(s) 226
AcyI GRCGYC 1 cut(s) 91
AflII CTTAAG 1 cut(s) 233
AgsI TTSAA 1 cut(s) 116
AluBI AGCT 3 cut(s) 49, 171, 182
AluI AGCT 3 cut(s) 49, 171, 182
ApeKI GCWGC 3 cut(s) 371, 374, 377
ApoI RAATTY 1 cut(s) 226
ArsI GACNNNNNNTTYG 2 cut(s) 81, 113
AspLEI GCGC 1 cut(s) 336
AspS9I GGNCC 1 cut(s) 68
AsuHPI GGTGA 1 cut(s) 314
AsuNHI GCTAGC 1 cut(s) 167
AvaII GGWCC 1 cut(s) 68
BauI CACGAG 1 cut(s) 329
BbvI GCAGC 3 cut(s) 358, 361, 389
BccI CCATC 1 cut(s) 59
BfaI CTAG 1 cut(s) 168
BfmI CTRYAG 1 cut(s) 375
BfoI RGCGCY 1 cut(s) 337
BfrI CTTAAG 1 cut(s) 233
BisI GCNGC 4 cut(s) 165, 372, 375, 378
BlpI GCTNAGC 1 cut(s) 147
BlsI GCNGC 4 cut(s) 166, 373, 376, 379
Bme18I GGWCC 1 cut(s) 68
BmgT120I GGNCC 1 cut(s) 68
BmtI GCTAGC 1 cut(s) 171
Bpu1102I GCTNAGC 1 cut(s) 147
BsaHI GRCGYC 1 cut(s) 91
BsaJI CCNNGG 2 cut(s) 27, 251
Bse3DI GCAATG 1 cut(s) 292
BseDI CCNNGG 2 cut(s) 27, 251
BseGI GGATG 1 cut(s) 70
BseMI GCAATG 1 cut(s) 292
BseXI GCAGC 3 cut(s) 358, 361, 389
Bsp1720I GCTNAGC 1 cut(s) 147
BspACI CCGC 3 cut(s) 142, 165, 351
BspMAI CTGCAG 1 cut(s) 379
BspOI GCTAGC 1 cut(s) 171
BspTI CTTAAG 1 cut(s) 233
BsrDI GCAATG 1 cut(s) 292
BssECI CCNNGG 2 cut(s) 27, 251
BssNI GRCGYC 1 cut(s) 91
BssSI CACGAG 1 cut(s) 329
BssT1I CCWWGG 2 cut(s) 27, 251
Bst2BI CACGAG 1 cut(s) 329
BstACI GRCGYC 1 cut(s) 91
BstAFI CTTAAG 1 cut(s) 233
BstC8I GCNNGC 2 cut(s) 144, 169
BstDEI CTNAG 1 cut(s) 147
BstEII GGTNACC 1 cut(s) 353
BstF5I GGATG 1 cut(s) 70
BstH2I RGCGCY 1 cut(s) 337
BstHHI GCGC 1 cut(s) 336
BstMWI GCNNNNNNNGC 3 cut(s) 38, 148, 377
BstPI GGTNACC 1 cut(s) 353
BstSFI CTRYAG 1 cut(s) 375
BstV1I GCAGC 3 cut(s) 358, 361, 389
BstXI CCANNNNNNTGG 1 cut(s) 209
BtsCI GGATG 1 cut(s) 70
Cac8I GCNNGC 2 cut(s) 144, 169
CfoI GCGC 1 cut(s) 336
Cfr13I GGNCC 1 cut(s) 68
CviAII CATG 1 cut(s) 215
CviJI RGCY 8 cut(s) 32, 49, 146, 164, 171, 182, 371, 380
CviKI_1 RGCY 8 cut(s) 32, 49, 146, 164, 171, 182, 371, 380
DdeI CTNAG 1 cut(s) 147
Eco130I CCWWGG 2 cut(s) 27, 251
Eco47I GGWCC 1 cut(s) 68
Eco91I GGTNACC 1 cut(s) 353
EcoO65I GGTNACC 1 cut(s) 353
EcoT14I CCWWGG 2 cut(s) 27, 251
ErhI CCWWGG 2 cut(s) 27, 251
FaeI CATG 1 cut(s) 218
FaiI YATR 5 cut(s) 59, 174, 216, 246, 403
FatI CATG 1 cut(s) 214
FauI CCCGC 1 cut(s) 135
Fnu4HI GCNGC 4 cut(s) 165, 372, 375, 378
FokI GGATG 1 cut(s) 77
Fsp4HI GCNGC 4 cut(s) 165, 372, 375, 378
FspBI CTAG 1 cut(s) 168
GlaI GCGC 1 cut(s) 335
GluI GCNGC 4 cut(s) 165, 372, 375, 378
HaeII RGCGCY 1 cut(s) 337
HhaI GCGC 1 cut(s) 336
Hin1I GRCGYC 1 cut(s) 91
Hin1II CATG 1 cut(s) 218
Hin6I GCGC 1 cut(s) 334
HinP1I GCGC 1 cut(s) 334
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 3 cut(s) 97, 109, 133
HphI GGTGA 1 cut(s) 314
Hpy166II GTNNAC 2 cut(s) 89, 305
Hpy188I TCNGA 2 cut(s) 96, 364
Hpy188III TCNNGA 4 cut(s) 77, 106, 113, 329
Hpy8I GTNNAC 2 cut(s) 89, 305
HpyCH4IV ACGT 1 cut(s) 91
HpyCH4V TGCA 4 cut(s) 57, 317, 377, 390
HpyF10VI GCNNNNNNNGC 3 cut(s) 38, 148, 377
HpyF3I CTNAG 1 cut(s) 147
HpySE526I ACGT 1 cut(s) 91
Hsp92I GRCGYC 1 cut(s) 91
Hsp92II CATG 1 cut(s) 218
HspAI GCGC 1 cut(s) 334
LmnI GCTCC 1 cut(s) 38
LpnPI CCDG 2 cut(s) 285, 376
Lsp1109I GCAGC 3 cut(s) 358, 361, 389
MaeI CTAG 1 cut(s) 168
MaeII ACGT 1 cut(s) 91
MaeIII GTNAC 2 cut(s) 326, 353
MboII GAAGA 2 cut(s) 128, 203
MluCI AATT 3 cut(s) 72, 226, 365
MlyI GAGTC 1 cut(s) 103
MseI TTAA 3 cut(s) 234, 258, 347
MslI CAYNNNNRTG 1 cut(s) 219
MspA1I CMGCKG 1 cut(s) 142
MspCI CTTAAG 1 cut(s) 233
MwoI GCNNNNNNNGC 3 cut(s) 38, 148, 377
NheI GCTAGC 1 cut(s) 167
NlaIII CATG 1 cut(s) 218
NmuCI GTSAC 1 cut(s) 326
PcsI WCGNNNNNNNCGW 1 cut(s) 97
PfeI GAWTC 2 cut(s) 97, 133
PkrI GCNGC 4 cut(s) 166, 373, 376, 379
PleI GAGTC 1 cut(s) 103
PpsI GAGTC 1 cut(s) 103
PspEI GGTNACC 1 cut(s) 353
PspPI GGNCC 1 cut(s) 68
PstI CTGCAG 1 cut(s) 379
RseI CAYNNNNRTG 1 cut(s) 219
SaqAI TTAA 3 cut(s) 234, 258, 347
SatI GCNGC 4 cut(s) 165, 372, 375, 378
Sau96I GGNCC 1 cut(s) 68
SchI GAGTC 1 cut(s) 103
SetI ASST 7 cut(s) 51, 94, 173, 184, 257, 313, 360
SfcI CTRYAG 1 cut(s) 375
SinI GGWCC 1 cut(s) 68
SmiMI CAYNNNNRTG 1 cut(s) 219
SmlI CTYRAG 1 cut(s) 233
SmoI CTYRAG 1 cut(s) 233
Sse9I AATT 3 cut(s) 72, 226, 365
SsiI CCGC 3 cut(s) 142, 165, 351
SspMI CTAG 1 cut(s) 168
StyI CCWWGG 2 cut(s) 27, 251
TaiI ACGT 1 cut(s) 94
TaqI TCGA 1 cut(s) 343
TasI AATT 3 cut(s) 72, 226, 365
TauI GCSGC 1 cut(s) 167
TfiI GAWTC 2 cut(s) 97, 133
Tru1I TTAA 3 cut(s) 234, 258, 347
Tru9I TTAA 3 cut(s) 234, 258, 347
TseFI GTSAC 1 cut(s) 326
TseI GCWGC 3 cut(s) 371, 374, 377
Tsp45I GTSAC 1 cut(s) 326
TspDTI ATGAA 1 cut(s) 204
Vha464I CTTAAG 1 cut(s) 233
VpaK11BI GGWCC 1 cut(s) 68
XapI RAATTY 1 cut(s) 226
XspI CTAG 1 cut(s) 168
ZraI GACGTC 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.