Rroxscaffold_4G00319120

Amino-acid acetyltransferase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
46618392 .. 46618727
336 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00319120.1

Sequence Viewer

Length: 336 bp
ATGGATGGTCCAATTCTTGATGAGAGTGGACGTGTGATTCGTTTCTTGACTCTTGAAGAAGCAGACAAGTTGATTCGTCAGCGGGCTAAGCAAAGTGAAATAGCCGCTAGCTATGTGAAAGTCGTTGATGAAGAAAATCTCCATTATCTTGGACATGATAGTGGGAATTTTCTTAAGGAAAAGCATATTCCAATGTTTAACAATGGTGTTGGTTTTGAGAATGGCAATGGATTGTGGTCTGGTGAACAAGGTTTTGCAATAGGGGGTCAAGAGCGCCAAAGTCGATTAAGCGGTTACCTTTCGAATTGGCTGCTGCAGCCTTTGTTTGCAGGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

111

Amino Acids

12.41

Weight (kDa)

5.3

Isoelectric Point (pI)

43.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031268)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0003499.1_g000029
rosa_roxburghii Rroxscaffold_4G00319120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 82, 105, 291
AcsI RAATTY 1 cut(s) 166
AflII CTTAAG 1 cut(s) 173
AflIII ACRYGT 1 cut(s) 31
AgsI TTSAA 1 cut(s) 56
AjiI CACGTC 1 cut(s) 32
AluBI AGCT 1 cut(s) 111
AluI AGCT 1 cut(s) 111
ApeKI GCWGC 3 cut(s) 310, 313, 316
ApoI RAATTY 1 cut(s) 166
ArsI GACNNNNNNTTYG 2 cut(s) 21, 53
AspLEI GCGC 1 cut(s) 276
AspS9I GGNCC 1 cut(s) 8
AsuHPI GGTGA 1 cut(s) 254
AsuII TTCGAA 1 cut(s) 302
AsuNHI GCTAGC 1 cut(s) 107
AvaII GGWCC 1 cut(s) 8
BbvI GCAGC 3 cut(s) 297, 300, 328
BcgI CGANNNNNNTGC 2 cut(s) 292, 326
BfaI CTAG 1 cut(s) 108
BfmI CTRYAG 1 cut(s) 314
BfoI RGCGCY 1 cut(s) 277
BfrI CTTAAG 1 cut(s) 173
BisI GCNGC 4 cut(s) 105, 311, 314, 317
BlpI GCTNAGC 1 cut(s) 87
BlsI GCNGC 4 cut(s) 106, 312, 315, 318
Bme18I GGWCC 1 cut(s) 8
BmgBI CACGTC 1 cut(s) 32
BmgT120I GGNCC 1 cut(s) 8
BmtI GCTAGC 1 cut(s) 111
Bpu1102I GCTNAGC 1 cut(s) 87
Bpu14I TTCGAA 1 cut(s) 302
Bse3DI GCAATG 1 cut(s) 232
BseGI GGATG 1 cut(s) 10
BseMI GCAATG 1 cut(s) 232
BseXI GCAGC 3 cut(s) 297, 300, 328
Bsp119I TTCGAA 1 cut(s) 302
Bsp1720I GCTNAGC 1 cut(s) 87
BspACI CCGC 3 cut(s) 82, 105, 291
BspMAI CTGCAG 1 cut(s) 318
BspOI GCTAGC 1 cut(s) 111
BspT104I TTCGAA 1 cut(s) 302
BspTI CTTAAG 1 cut(s) 173
BsrDI GCAATG 1 cut(s) 232
BstAFI CTTAAG 1 cut(s) 173
BstBI TTCGAA 1 cut(s) 302
BstC8I GCNNGC 2 cut(s) 84, 109
BstDEI CTNAG 1 cut(s) 87
BstEII GGTNACC 1 cut(s) 293
BstF5I GGATG 1 cut(s) 10
BstH2I RGCGCY 1 cut(s) 277
BstHHI GCGC 1 cut(s) 276
BstMWI GCNNNNNNNGC 2 cut(s) 88, 316
BstPI GGTNACC 1 cut(s) 293
BstSFI CTRYAG 1 cut(s) 314
BstV1I GCAGC 3 cut(s) 297, 300, 328
BstXI CCANNNNNNTGG 1 cut(s) 149
BtrI CACGTC 1 cut(s) 32
BtsCI GGATG 1 cut(s) 10
Cac8I GCNNGC 2 cut(s) 84, 109
CfoI GCGC 1 cut(s) 276
Cfr13I GGNCC 1 cut(s) 8
CviAII CATG 1 cut(s) 155
CviJI RGCY 5 cut(s) 86, 104, 111, 310, 319
CviKI_1 RGCY 5 cut(s) 86, 104, 111, 310, 319
DdeI CTNAG 1 cut(s) 87
Eco47I GGWCC 1 cut(s) 8
Eco91I GGTNACC 1 cut(s) 293
EcoO65I GGTNACC 1 cut(s) 293
FaeI CATG 1 cut(s) 158
FaiI YATR 3 cut(s) 114, 156, 186
FatI CATG 1 cut(s) 154
FauI CCCGC 1 cut(s) 75
Fnu4HI GCNGC 4 cut(s) 105, 311, 314, 317
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 4 cut(s) 105, 311, 314, 317
FspBI CTAG 1 cut(s) 108
GlaI GCGC 1 cut(s) 275
GluI GCNGC 4 cut(s) 105, 311, 314, 317
HaeII RGCGCY 1 cut(s) 277
HhaI GCGC 1 cut(s) 276
Hin1II CATG 1 cut(s) 158
Hin6I GCGC 1 cut(s) 274
HinP1I GCGC 1 cut(s) 274
HinfI GANTC 3 cut(s) 37, 49, 73
HphI GGTGA 1 cut(s) 254
Hpy166II GTNNAC 2 cut(s) 29, 245
Hpy188III TCNNGA 4 cut(s) 17, 46, 53, 269
Hpy8I GTNNAC 2 cut(s) 29, 245
HpyCH4IV ACGT 1 cut(s) 31
HpyCH4V TGCA 3 cut(s) 257, 316, 329
HpyF10VI GCNNNNNNNGC 2 cut(s) 88, 316
HpyF3I CTNAG 1 cut(s) 87
HpySE526I ACGT 1 cut(s) 31
Hsp92II CATG 1 cut(s) 158
HspAI GCGC 1 cut(s) 274
LpnPI CCDG 2 cut(s) 225, 315
Lsp1109I GCAGC 3 cut(s) 297, 300, 328
MaeI CTAG 1 cut(s) 108
MaeII ACGT 1 cut(s) 31
MaeIII GTNAC 1 cut(s) 293
MboII GAAGA 2 cut(s) 68, 143
MluCI AATT 3 cut(s) 12, 166, 304
MlyI GAGTC 1 cut(s) 43
MseI TTAA 3 cut(s) 174, 198, 287
MslI CAYNNNNRTG 1 cut(s) 159
MspA1I CMGCKG 1 cut(s) 82
MspCI CTTAAG 1 cut(s) 173
MwoI GCNNNNNNNGC 2 cut(s) 88, 316
NheI GCTAGC 1 cut(s) 107
NlaIII CATG 1 cut(s) 158
NspV TTCGAA 1 cut(s) 302
PcsI WCGNNNNNNNCGW 1 cut(s) 37
PfeI GAWTC 2 cut(s) 37, 73
PkrI GCNGC 4 cut(s) 106, 312, 315, 318
PleI GAGTC 1 cut(s) 43
PpsI GAGTC 1 cut(s) 43
PspEI GGTNACC 1 cut(s) 293
PspPI GGNCC 1 cut(s) 8
PstI CTGCAG 1 cut(s) 318
RseI CAYNNNNRTG 1 cut(s) 159
SaqAI TTAA 3 cut(s) 174, 198, 287
SatI GCNGC 4 cut(s) 105, 311, 314, 317
Sau96I GGNCC 1 cut(s) 8
SchI GAGTC 1 cut(s) 43
SetI ASST 4 cut(s) 34, 113, 253, 300
SfcI CTRYAG 1 cut(s) 314
SfuI TTCGAA 1 cut(s) 302
SinI GGWCC 1 cut(s) 8
SmiMI CAYNNNNRTG 1 cut(s) 159
SmlI CTYRAG 1 cut(s) 173
SmoI CTYRAG 1 cut(s) 173
Sse9I AATT 3 cut(s) 12, 166, 304
SsiI CCGC 3 cut(s) 82, 105, 291
SspMI CTAG 1 cut(s) 108
TaiI ACGT 1 cut(s) 34
TaqI TCGA 2 cut(s) 283, 302
TasI AATT 3 cut(s) 12, 166, 304
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 2 cut(s) 37, 73
Tru1I TTAA 3 cut(s) 174, 198, 287
Tru9I TTAA 3 cut(s) 174, 198, 287
TseI GCWGC 3 cut(s) 310, 313, 316
TspDTI ATGAA 1 cut(s) 144
Vha464I CTTAAG 1 cut(s) 173
VpaK11BI GGWCC 1 cut(s) 8
XapI RAATTY 1 cut(s) 166
XspI CTAG 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.