Rmu_sc0003805.1_g000020

Alcohol dehydrogenase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003805.1
Physical Location & Seq
Reverse (-)
87228 .. 87582
355 bp
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UTR
Exon/CDS
Intron
Rmu_sc0003805.1_g000020.1.cds

Sequence Viewer

Length: 267 bp
atgttaggagtggacaagccagggtcacaggtgagcatttcttctcgtgatatccttactactggcaaatccctcattggagtcttatttggaggactcaaacccaaatcggatattcctattctcctcaatcgctacatcaacaaggaactacaactggatgagtttgtaacacatgaagtgccatttgaagacattaacaaagcttttgatttactcattgaagggaaatgtttgcgatgtgtaatctgtatgaatgatcagtga

Protein Analysis

88

Amino Acids

9.79

Weight (kDa)

5.23

Isoelectric Point (pI)

40.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029336)

Species Orthologous Gene IDs
pyrus_communis pycom08g00340
rosa_multiflora Rmu_sc0003805.1_g000020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 191, 224
AjnI CCWGG 1 cut(s) 19
AluBI AGCT 1 cut(s) 206
AluI AGCT 1 cut(s) 206
AsuHPI GGTGA 1 cut(s) 43
BauI CACGAG 1 cut(s) 45
BbsI GAAGAC 1 cut(s) 198
BciT130I CCWGG 1 cut(s) 21
BclI TGATCA 1 cut(s) 259
Bme1390I CCNGG 1 cut(s) 21
BmrFI CCNGG 1 cut(s) 21
BpiI GAAGAC 1 cut(s) 198
BsaJI CCNNGG 1 cut(s) 20
Bse1I ACTGG 2 cut(s) 67, 162
BseBI CCWGG 1 cut(s) 21
BseDI CCNNGG 1 cut(s) 20
BseGI GGATG 1 cut(s) 166
BseNI ACTGG 2 cut(s) 67, 162
BseRI GAGGAG 1 cut(s) 116
Bsp143I GATC 1 cut(s) 259
BsrI ACTGG 2 cut(s) 67, 162
BssECI CCNNGG 1 cut(s) 20
BssMI GATC 1 cut(s) 259
BssSI CACGAG 1 cut(s) 45
Bst2BI CACGAG 1 cut(s) 45
Bst2UI CCWGG 1 cut(s) 21
BstF5I GGATG 1 cut(s) 166
BstKTI GATC 1 cut(s) 262
BstMBI GATC 1 cut(s) 259
BstNI CCWGG 1 cut(s) 21
BstSCI CCNGG 1 cut(s) 19
BstV2I GAAGAC 1 cut(s) 198
BtgZI GCGATG 1 cut(s) 253
BtsCI GGATG 1 cut(s) 166
CviAII CATG 1 cut(s) 176
CviJI RGCY 2 cut(s) 19, 206
CviKI_1 RGCY 2 cut(s) 19, 206
DpnI GATC 1 cut(s) 261
DpnII GATC 1 cut(s) 259
Eco32I GATATC 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 19
EcoRV GATATC 1 cut(s) 52
FaeI CATG 1 cut(s) 179
FaiI YATR 2 cut(s) 177, 254
FatI CATG 1 cut(s) 175
FbaI TGATCA 1 cut(s) 259
FokI GGATG 1 cut(s) 173
Hin1II CATG 1 cut(s) 179
HindIII AAGCTT 1 cut(s) 204
HinfI GANTC 2 cut(s) 81, 96
HphI GGTGA 1 cut(s) 43
Hpy166II GTNNAC 1 cut(s) 13
Hpy188I TCNGA 1 cut(s) 112
Hpy188III TCNNGA 1 cut(s) 47
Hpy8I GTNNAC 1 cut(s) 13
HpyAV CCTTC 1 cut(s) 218
Hsp92II CATG 1 cut(s) 179
Ksp22I TGATCA 1 cut(s) 259
Kzo9I GATC 1 cut(s) 259
LpnPI CCDG 5 cut(s) 6, 14, 33, 48, 143
MaeIII GTNAC 2 cut(s) 24, 169
MalI GATC 1 cut(s) 261
MboI GATC 1 cut(s) 259
MboII GAAGA 2 cut(s) 33, 203
MlyI GAGTC 2 cut(s) 90, 90
MnlI CCTC 3 cut(s) 83, 86, 137
MseI TTAA 1 cut(s) 198
MspR9I CCNGG 1 cut(s) 21
MvaI CCWGG 1 cut(s) 21
NdeII GATC 1 cut(s) 259
NlaIII CATG 1 cut(s) 179
NmuCI GTSAC 1 cut(s) 24
PleI GAGTC 2 cut(s) 89, 90
PpsI GAGTC 2 cut(s) 89, 90
Psp6I CCWGG 1 cut(s) 19
PspGI CCWGG 1 cut(s) 19
SaqAI TTAA 1 cut(s) 198
Sau3AI GATC 1 cut(s) 259
SchI GAGTC 2 cut(s) 90, 90
ScrFI CCNGG 1 cut(s) 21
SetI ASST 2 cut(s) 33, 208
StyD4I CCNGG 1 cut(s) 19
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TseFI GTSAC 1 cut(s) 24
Tsp45I GTSAC 1 cut(s) 24
TspDTI ATGAA 1 cut(s) 192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.