Rmu_sc0004851.1_g000012
ERF Family

Belongs to the small GTPase superfamily. Rho family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004851.1
Physical Location & Seq
Reverse (-)
45256 .. 46602
1347 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004851.1_g000012.1.cds

Sequence Viewer

Length: 330 bp
atgccagaacttcgccgatttgctcctaatgttccaattgtccttgttgggacaaagcttgatcttcgtgaggacatgcgctatctagctgatcatatgggatcgaacatcataacttctgctcagggagaggagttgagaaagcaaataggagccgcagcttatattgaatgcagctctaagacccaacagaatgtcaaagcggtgtttgacactgccatcaaggctgttcttcaacctccaagaaggaaggatatagttaagcagaaaaggcaccgaaggtctggttgctcatttgtgagcattgtctgtggaggatgtgacgcttag

Protein Analysis

109

Amino Acids

12.1

Weight (kDa)

9.59

Isoelectric Point (pI)

71.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031322)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0004851.1_g000012 Rmu_sc0022783.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 273
AciI CCGC 2 cut(s) 156, 203
AclWI GGATC 1 cut(s) 109
AgsI TTSAA 2 cut(s) 170, 236
AluBI AGCT 4 cut(s) 58, 89, 161, 177
AluI AGCT 4 cut(s) 58, 89, 161, 177
AlwI GGATC 1 cut(s) 109
ApeKI GCWGC 2 cut(s) 158, 174
AspLEI GCGC 1 cut(s) 81
BanI GGYRCC 1 cut(s) 273
BbvI GCAGC 2 cut(s) 170, 186
BccI CCATC 1 cut(s) 227
BclI TGATCA 1 cut(s) 91
BfaI CTAG 1 cut(s) 86
BglI GCCNNNNNGGC 1 cut(s) 224
BisI GCNGC 3 cut(s) 156, 159, 175
BlsI GCNGC 3 cut(s) 157, 160, 176
BmiI GGNNCC 2 cut(s) 154, 275
Bpu10I CCTNAGC 1 cut(s) 123
BseGI GGATG 1 cut(s) 323
BseMII CTCAG 1 cut(s) 137
BseRI GAGGAG 1 cut(s) 146
BseXI GCAGC 2 cut(s) 170, 186
BshNI GGYRCC 1 cut(s) 273
BslFI GGGAC 1 cut(s) 64
BsmFI GGGAC 1 cut(s) 64
BsmI GAATGC 1 cut(s) 176
Bsp143I GATC 3 cut(s) 61, 91, 101
BspACI CCGC 2 cut(s) 156, 203
BspCNI CTCAG 1 cut(s) 136
BspLI GGNNCC 2 cut(s) 154, 275
BspPI GGATC 1 cut(s) 109
BspT107I GGYRCC 1 cut(s) 273
BssMI GATC 3 cut(s) 61, 91, 101
BstDEI CTNAG 3 cut(s) 123, 180, 327
BstF5I GGATG 1 cut(s) 323
BstHHI GCGC 1 cut(s) 81
BstKTI GATC 3 cut(s) 64, 94, 104
BstMBI GATC 3 cut(s) 61, 91, 101
BstMWI GCNNNNNNNGC 2 cut(s) 224, 271
BstNSI RCATGY 1 cut(s) 79
BstV1I GCAGC 2 cut(s) 170, 186
BtsCI GGATG 1 cut(s) 323
BtsI GCAGTG 1 cut(s) 213
BtsIMutI CAGTG 1 cut(s) 213
CfoI GCGC 1 cut(s) 81
CviAII CATG 1 cut(s) 76
CviJI RGCY 6 cut(s) 58, 89, 155, 161, 177, 227
CviKI_1 RGCY 6 cut(s) 58, 89, 155, 161, 177, 227
DdeI CTNAG 3 cut(s) 123, 180, 327
DpnI GATC 3 cut(s) 63, 93, 103
DpnII GATC 3 cut(s) 61, 91, 101
FaeI CATG 1 cut(s) 79
FaiI YATR 6 cut(s) 77, 96, 98, 113, 165, 257
FaqI GGGAC 1 cut(s) 64
FatI CATG 1 cut(s) 75
FauNDI CATATG 1 cut(s) 96
FbaI TGATCA 1 cut(s) 91
Fnu4HI GCNGC 3 cut(s) 156, 159, 175
Fsp4HI GCNGC 3 cut(s) 156, 159, 175
FspBI CTAG 1 cut(s) 86
GlaI GCGC 1 cut(s) 80
GluI GCNGC 3 cut(s) 156, 159, 175
HhaI GCGC 1 cut(s) 81
Hin1II CATG 1 cut(s) 79
Hin6I GCGC 1 cut(s) 79
HinP1I GCGC 1 cut(s) 79
HindIII AAGCTT 1 cut(s) 56
Hpy188III TCNNGA 1 cut(s) 68
HpyAV CCTTC 3 cut(s) 240, 244, 273
HpyCH4V TGCA 1 cut(s) 174
HpyF10VI GCNNNNNNNGC 2 cut(s) 224, 271
HpyF3I CTNAG 3 cut(s) 123, 180, 327
Hsp92II CATG 1 cut(s) 79
HspAI GCGC 1 cut(s) 79
Ksp22I TGATCA 1 cut(s) 91
Kzo9I GATC 3 cut(s) 61, 91, 101
LmnI GCTCC 2 cut(s) 28, 152
LpnPI CCDG 3 cut(s) 18, 110, 270
Lsp1109I GCAGC 2 cut(s) 170, 186
MaeI CTAG 1 cut(s) 86
MaeIII GTNAC 1 cut(s) 320
MalI GATC 3 cut(s) 63, 93, 103
MboI GATC 3 cut(s) 61, 91, 101
MboII GAAGA 2 cut(s) 56, 224
MfeI CAATTG 1 cut(s) 36
MluCI AATT 1 cut(s) 36
MnlI CCTC 4 cut(s) 64, 124, 249, 308
MseI TTAA 1 cut(s) 261
MunI CAATTG 1 cut(s) 36
Mva1269I GAATGC 1 cut(s) 176
MwoI GCNNNNNNNGC 2 cut(s) 224, 271
NdeI CATATG 1 cut(s) 96
NdeII GATC 3 cut(s) 61, 91, 101
NlaIII CATG 1 cut(s) 79
NlaIV GGNNCC 2 cut(s) 154, 275
NmuCI GTSAC 1 cut(s) 320
NspI RCATGY 1 cut(s) 79
PctI GAATGC 1 cut(s) 176
PkrI GCNGC 3 cut(s) 157, 160, 176
PspN4I GGNNCC 2 cut(s) 154, 275
SaqAI TTAA 1 cut(s) 261
SatI GCNGC 3 cut(s) 156, 159, 175
Sau3AI GATC 3 cut(s) 61, 91, 101
SetI ASST 6 cut(s) 60, 91, 163, 179, 241, 284
Sse9I AATT 1 cut(s) 36
SsiI CCGC 2 cut(s) 156, 203
SspMI CTAG 1 cut(s) 86
TaqI TCGA 1 cut(s) 104
TasI AATT 1 cut(s) 36
TauI GCSGC 1 cut(s) 158
Tru1I TTAA 1 cut(s) 261
Tru9I TTAA 1 cut(s) 261
TscAI CASTG 1 cut(s) 220
TseFI GTSAC 1 cut(s) 320
TseI GCWGC 2 cut(s) 158, 174
Tsp45I GTSAC 1 cut(s) 320
TspRI CASTG 1 cut(s) 220
XceI RCATGY 1 cut(s) 79
XspI CTAG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.