Rmu_sc0022783.1_g000001
ERF Family

Belongs to the small GTPase superfamily. Rho family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0022783.1
Physical Location & Seq
Forward (+)
1 .. 643
643 bp
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UTR
Exon/CDS
Intron
Rmu_sc0022783.1_g000001.1.cds

Sequence Viewer

Length: 315 bp
gcttctcagtggatgccagaacttcgccgatttgcgcctaatgttccaattgtccttgttgggacaaagcttgatcttcgtgaggacatgcgctatctagctgatcatatgggatcaaacatcataacttctgctcagggagaggagttgagaaagcaaataggagccgcagcttatattgaatgcagctctaagacccaacagaatgtcaaagcggtgtttgacactgccatcaaggctgttcttcaacctccaagaaggaaggatatagttaagcagaaaaggcaccgaaggtctggttgctcatttgtgtaa

Protein Analysis

104

Amino Acids

11.77

Weight (kDa)

10.01

Isoelectric Point (pI)

76.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0031322)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0004851.1_g000012 Rmu_sc0022783.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 285
AciI CCGC 2 cut(s) 168, 215
AclWI GGATC 1 cut(s) 121
AgsI TTSAA 2 cut(s) 182, 248
AluBI AGCT 4 cut(s) 70, 101, 173, 189
AluI AGCT 4 cut(s) 70, 101, 173, 189
AlwI GGATC 1 cut(s) 121
ApeKI GCWGC 2 cut(s) 170, 186
AspLEI GCGC 2 cut(s) 37, 93
BanI GGYRCC 1 cut(s) 285
BbvI GCAGC 2 cut(s) 182, 198
BccI CCATC 1 cut(s) 239
BclI TGATCA 1 cut(s) 103
BfaI CTAG 1 cut(s) 98
BglI GCCNNNNNGGC 1 cut(s) 236
BisI GCNGC 3 cut(s) 168, 171, 187
BlsI GCNGC 3 cut(s) 169, 172, 188
BmiI GGNNCC 2 cut(s) 166, 287
BmsI GCATC 1 cut(s) 3
Bpu10I CCTNAGC 1 cut(s) 135
BseGI GGATG 1 cut(s) 18
BseMII CTCAG 2 cut(s) 20, 149
BseRI GAGGAG 1 cut(s) 158
BseXI GCAGC 2 cut(s) 182, 198
BshNI GGYRCC 1 cut(s) 285
BslFI GGGAC 1 cut(s) 76
BsmFI GGGAC 1 cut(s) 76
BsmI GAATGC 1 cut(s) 188
Bsp143I GATC 3 cut(s) 73, 103, 113
BspACI CCGC 2 cut(s) 168, 215
BspCNI CTCAG 2 cut(s) 19, 148
BspLI GGNNCC 2 cut(s) 166, 287
BspPI GGATC 1 cut(s) 121
BspT107I GGYRCC 1 cut(s) 285
BssMI GATC 3 cut(s) 73, 103, 113
BstDEI CTNAG 3 cut(s) 6, 135, 192
BstF5I GGATG 1 cut(s) 18
BstHHI GCGC 2 cut(s) 37, 93
BstKTI GATC 3 cut(s) 76, 106, 116
BstMBI GATC 3 cut(s) 73, 103, 113
BstMWI GCNNNNNNNGC 2 cut(s) 236, 283
BstNSI RCATGY 1 cut(s) 91
BstV1I GCAGC 2 cut(s) 182, 198
BtsCI GGATG 1 cut(s) 18
BtsI GCAGTG 1 cut(s) 225
BtsIMutI CAGTG 2 cut(s) 14, 225
CfoI GCGC 2 cut(s) 37, 93
CviAII CATG 1 cut(s) 88
CviJI RGCY 6 cut(s) 70, 101, 167, 173, 189, 239
CviKI_1 RGCY 6 cut(s) 70, 101, 167, 173, 189, 239
DdeI CTNAG 3 cut(s) 6, 135, 192
DpnI GATC 3 cut(s) 75, 105, 115
DpnII GATC 3 cut(s) 73, 103, 113
FaeI CATG 1 cut(s) 91
FaiI YATR 6 cut(s) 89, 108, 110, 125, 177, 269
FaqI GGGAC 1 cut(s) 76
FatI CATG 1 cut(s) 87
FauNDI CATATG 1 cut(s) 108
FbaI TGATCA 1 cut(s) 103
Fnu4HI GCNGC 3 cut(s) 168, 171, 187
FokI GGATG 1 cut(s) 25
Fsp4HI GCNGC 3 cut(s) 168, 171, 187
FspBI CTAG 1 cut(s) 98
GlaI GCGC 2 cut(s) 36, 92
GluI GCNGC 3 cut(s) 168, 171, 187
HhaI GCGC 2 cut(s) 37, 93
Hin1II CATG 1 cut(s) 91
Hin6I GCGC 2 cut(s) 35, 91
HinP1I GCGC 2 cut(s) 35, 91
HindIII AAGCTT 1 cut(s) 68
Hpy188III TCNNGA 1 cut(s) 80
HpyAV CCTTC 3 cut(s) 252, 256, 285
HpyCH4V TGCA 1 cut(s) 186
HpyF10VI GCNNNNNNNGC 2 cut(s) 236, 283
HpyF3I CTNAG 3 cut(s) 6, 135, 192
Hsp92II CATG 1 cut(s) 91
HspAI GCGC 2 cut(s) 35, 91
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 3 cut(s) 73, 103, 113
LmnI GCTCC 1 cut(s) 164
LpnPI CCDG 3 cut(s) 30, 122, 282
Lsp1109I GCAGC 2 cut(s) 182, 198
LweI GCATC 1 cut(s) 3
MaeI CTAG 1 cut(s) 98
MalI GATC 3 cut(s) 75, 105, 115
MboI GATC 3 cut(s) 73, 103, 113
MboII GAAGA 2 cut(s) 68, 236
MfeI CAATTG 1 cut(s) 48
MluCI AATT 1 cut(s) 48
MnlI CCTC 3 cut(s) 76, 136, 261
MseI TTAA 1 cut(s) 273
MunI CAATTG 1 cut(s) 48
Mva1269I GAATGC 1 cut(s) 188
MwoI GCNNNNNNNGC 2 cut(s) 236, 283
NdeI CATATG 1 cut(s) 108
NdeII GATC 3 cut(s) 73, 103, 113
NlaIII CATG 1 cut(s) 91
NlaIV GGNNCC 2 cut(s) 166, 287
NspI RCATGY 1 cut(s) 91
PctI GAATGC 1 cut(s) 188
PkrI GCNGC 3 cut(s) 169, 172, 188
PspN4I GGNNCC 2 cut(s) 166, 287
SaqAI TTAA 1 cut(s) 273
SatI GCNGC 3 cut(s) 168, 171, 187
Sau3AI GATC 3 cut(s) 73, 103, 113
SetI ASST 6 cut(s) 72, 103, 175, 191, 253, 296
SfaNI GCATC 1 cut(s) 3
Sse9I AATT 1 cut(s) 48
SsiI CCGC 2 cut(s) 168, 215
SspMI CTAG 1 cut(s) 98
TasI AATT 1 cut(s) 48
TauI GCSGC 1 cut(s) 170
Tru1I TTAA 1 cut(s) 273
Tru9I TTAA 1 cut(s) 273
TscAI CASTG 2 cut(s) 14, 232
TseI GCWGC 2 cut(s) 170, 186
TspRI CASTG 2 cut(s) 14, 232
XceI RCATGY 1 cut(s) 91
XspI CTAG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.