Rmu_sc0006198.1_g000020

The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006198.1
Physical Location & Seq
Forward (+)
99125 .. 101290
2166 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006198.1_g000020.1.cds

Sequence Viewer

Length: 1134 bp
atgggtatcgatttggtcgccggcggcaacagcaagaacaccaagcgcacatcgcctggggctgaggatatctaccgcaagctcacagtcaagctctatgatttcatccacccaaggacgaagagtcatttcagcaaggtgattcgtcacaagctttgcatgagcaaggtcactgctctcaggttcaccgaaagggcaaggggtcgcattgagaaggctggtggagagagcttcagtttcgaccaattggctgttagagctccgcttgccgagaacacgatgcttcccagaggaccaaagaatggccgtgaagctgtgaagcatttcggtccaccacctggtgtcccacacagccacaccaagccatatgtgcgatcaaagggcaggaaattcgagaatgccagaggaaaaagcaacagccgtggtttccgtgtcgagtacgccctcaaagccgtgcgtaaggctaacggcgccgtcggcgtccgtggcaccgacaccatcgttctcggcgtcgagaagaagtccaccgctaagcttcacgactcgagatcagtgaggaagattgtgaacctggacaatcacattgctgtaccctgtgctggcctcaaagcagatgctcgtgtcctgataaacaaggcgaggattgaatgtgaaagccataggcttactgttgaggatccagtaacagttgagtatataacacattacattgctggtcttcagcaaaagtacacgcagagtggtggtgtgaggccatttggtctttcaactttgattgttgggtttcatccatacacgagtataccagcactgtatcagacagatccgtcatggactttttcagcatggaaagctaatgcaacgggaaggaactccaattcaataagggaatttctggagaaaaactacaaagaaacttctgggcaagatagcataaagcttgcgatccgtgctttggttcaggttgtggaaagtggagggaagaacatagaagttgctggcatgacaaaggatcatggtctgcgacaacttgaagaagctgaaatttatgctattgttgctgacatcgaagacatcgaagcagagaaagcagctgctgaggctgcaaagaaaggacctggcagggaaacatga

Protein Analysis

377

Amino Acids

41.48

Weight (kDa)

9.85

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031362)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8513405.1_g000001 Rmu_sc0006198.1_g000020

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 826
AccB1I GGYRCC 2 cut(s) 470, 488
AccB7I CCANNNNNTGG 2 cut(s) 302, 338
AccI GTMKAC 1 cut(s) 802
AciI CCGC 4 cut(s) 24, 76, 263, 528
AclWI GGATC 5 cut(s) 671, 684, 818, 940, 1020
AcoI YGGCCR 1 cut(s) 304
AcsI RAATTY 3 cut(s) 389, 890, 1044
AcuI CTGAAG 2 cut(s) 217, 704
AcyI GRCGYC 3 cut(s) 471, 480, 510
AdeI CACNNNGTG 1 cut(s) 341
AfaI GTAC 3 cut(s) 440, 591, 731
AfiI CCNNNNNNNGG 4 cut(s) 302, 338, 599, 955
AgsI TTSAA 4 cut(s) 647, 768, 882, 1034
AhdI GACNNNNNGTC 1 cut(s) 123
AjnI CCWGG 4 cut(s) 55, 337, 570, 1117
Alw21I GWGCWC 1 cut(s) 262
AlwI GGATC 5 cut(s) 671, 684, 818, 940, 1020
AlwNI CAGNNNCTG 1 cut(s) 1097
Ama87I CYCGRG 1 cut(s) 544
AoxI GGCC 3 cut(s) 304, 601, 752
ApeKI GCWGC 3 cut(s) 1091, 1094, 1103
ApoI RAATTY 3 cut(s) 389, 890, 1044
Asp700I GAANNNNTTC 1 cut(s) 323
AspLEI GCGC 2 cut(s) 48, 473
AspS9I GGNCC 3 cut(s) 293, 329, 1115
AsuHPI GGTGA 2 cut(s) 151, 178
AvaI CYCGRG 1 cut(s) 544
AvaII GGWCC 3 cut(s) 293, 329, 1115
BamHI GGATCC 1 cut(s) 676
BanI GGYRCC 2 cut(s) 470, 488
BanII GRGCYC 1 cut(s) 262
BauI CACGAG 2 cut(s) 618, 796
BbsI GAAGAC 2 cut(s) 710, 1077
Bbv12I GWGCWC 1 cut(s) 262
BbvCI CCTCAGC 2 cut(s) 63, 1098
BbvI GCAGC 3 cut(s) 1081, 1090, 1103
BccI CCATC 1 cut(s) 506
BceAI ACGGC 5 cut(s) 291, 405, 437, 458, 484
BcgI CGANNNNNNTGC 2 cut(s) 373, 407
BciT130I CCWGG 4 cut(s) 57, 339, 572, 1119
BfoI RGCGCY 1 cut(s) 474
BisI GCNGC 4 cut(s) 25, 1092, 1095, 1104
BlpI GCTNAGC 1 cut(s) 531
BlsI GCNGC 4 cut(s) 26, 1093, 1096, 1105
Bme1390I CCNGG 4 cut(s) 57, 339, 572, 1119
Bme18I GGWCC 3 cut(s) 293, 329, 1115
BmeRI GACNNNNNGTC 1 cut(s) 123
BmeT110I CYCGRG 1 cut(s) 544
BmgT120I GGNCC 3 cut(s) 293, 329, 1115
BmiI GGNNCC 3 cut(s) 472, 490, 678
BmrFI CCNGG 4 cut(s) 57, 339, 572, 1119
BmsI GCATC 2 cut(s) 270, 604
BpiI GAAGAC 2 cut(s) 710, 1077
BpmI CTGGAG 1 cut(s) 917
Bpu10I CCTNAGC 2 cut(s) 63, 1098
Bpu1102I GCTNAGC 1 cut(s) 531
Bsa29I ATCGAT 1 cut(s) 9
BsaHI GRCGYC 3 cut(s) 471, 480, 510
BsaJI CCNNGG 4 cut(s) 56, 113, 421, 484
Bsc4I CCNNNNNNNGG 4 cut(s) 302, 338, 599, 955
Bse118I RCCGGY 1 cut(s) 20
Bse1I ACTGG 1 cut(s) 680
Bse3DI GCAATG 2 cut(s) 582, 708
BseBI CCWGG 4 cut(s) 57, 339, 572, 1119
BseCI ATCGAT 1 cut(s) 9
BseDI CCNNGG 4 cut(s) 56, 113, 421, 484
BseGI GGATG 2 cut(s) 105, 787
BseLI CCNNNNNNNGG 4 cut(s) 302, 338, 599, 955
BseMI GCAATG 2 cut(s) 582, 708
BseMII CTCAG 3 cut(s) 54, 193, 1089
BseNI ACTGG 1 cut(s) 680
BseXI GCAGC 3 cut(s) 1081, 1090, 1103
BshFI GGCC 3 cut(s) 306, 603, 754
BshNI GGYRCC 2 cut(s) 470, 488
BshVI ATCGAT 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 262
BsiHKCI CYCGRG 1 cut(s) 544
BsiSI CCGG 1 cut(s) 21
BslFI GGGAC 1 cut(s) 329
BslI CCNNNNNNNGG 4 cut(s) 302, 338, 599, 955
BsmFI GGGAC 1 cut(s) 329
BsmI GAATGC 1 cut(s) 403
BsnI GGCC 3 cut(s) 306, 603, 754
BsoBI CYCGRG 1 cut(s) 544
Bsp1286I GDGCHC 1 cut(s) 262
Bsp143I GATC 6 cut(s) 374, 548, 676, 823, 945, 1012
Bsp1720I GCTNAGC 1 cut(s) 531
BspACI CCGC 4 cut(s) 24, 76, 263, 528
BspANI GGCC 3 cut(s) 306, 603, 754
BspCNI CTCAG 3 cut(s) 55, 192, 1090
BspDI ATCGAT 1 cut(s) 9
BspLI GGNNCC 3 cut(s) 472, 490, 678
BspPI GGATC 5 cut(s) 671, 684, 818, 940, 1020
BspT107I GGYRCC 2 cut(s) 470, 488
BsrDI GCAATG 2 cut(s) 582, 708
BsrFI RCCGGY 1 cut(s) 20
BsrI ACTGG 1 cut(s) 680
BssAI RCCGGY 1 cut(s) 20
BssECI CCNNGG 4 cut(s) 56, 113, 421, 484
BssMI GATC 6 cut(s) 374, 548, 676, 823, 945, 1012
BssNAI GTATAC 1 cut(s) 803
BssNI GRCGYC 3 cut(s) 471, 480, 510
BssSI CACGAG 2 cut(s) 618, 796
BssT1I CCWWGG 1 cut(s) 113
Bst1107I GTATAC 1 cut(s) 803
Bst2BI CACGAG 2 cut(s) 618, 796
Bst2UI CCWGG 4 cut(s) 57, 339, 572, 1119
Bst4CI ACNGT 4 cut(s) 88, 670, 688, 813
Bst6I CTCTTC 1 cut(s) 116
BstACI GRCGYC 3 cut(s) 471, 480, 510
BstC8I GCNNGC 6 cut(s) 22, 80, 267, 601, 942, 1000
BstDEI CTNAG 4 cut(s) 63, 179, 531, 1098
BstDSI CCRYGG 2 cut(s) 421, 484
BstF5I GGATG 2 cut(s) 105, 787
BstH2I RGCGCY 1 cut(s) 474
BstHHI GCGC 2 cut(s) 48, 473
BstKTI GATC 6 cut(s) 377, 551, 679, 826, 948, 1015
BstMBI GATC 6 cut(s) 374, 548, 676, 823, 945, 1012
BstNI CCWGG 4 cut(s) 57, 339, 572, 1119
BstSCI CCNGG 4 cut(s) 55, 337, 570, 1117
BstV1I GCAGC 3 cut(s) 1081, 1090, 1103
BstV2I GAAGAC 2 cut(s) 710, 1077
BstX2I RGATCY 2 cut(s) 676, 823
BstYI RGATCY 2 cut(s) 676, 823
BstZ17I GTATAC 1 cut(s) 803
Bsu15I ATCGAT 1 cut(s) 9
BsuRI GGCC 3 cut(s) 306, 603, 754
BsuTUI ATCGAT 1 cut(s) 9
BtgI CCRYGG 2 cut(s) 421, 484
BtgZI GCGATG 1 cut(s) 36
BtsCI GGATG 2 cut(s) 105, 787
BtsI GCAGTG 1 cut(s) 171
BtsIMutI CAGTG 3 cut(s) 171, 558, 809
Cac8I GCNNGC 6 cut(s) 22, 80, 267, 601, 942, 1000
CaiI CAGNNNCTG 1 cut(s) 1097
CfoI GCGC 2 cut(s) 48, 473
Cfr10I RCCGGY 1 cut(s) 20
Cfr13I GGNCC 3 cut(s) 293, 329, 1115
ClaI ATCGAT 1 cut(s) 9
CseI GACGC 2 cut(s) 469, 499
CsiI ACCWGGT 1 cut(s) 337
Csp6I GTAC 3 cut(s) 439, 590, 730
CspCI CAANNNNNGTGG 2 cut(s) 403, 438
CviAII CATG 6 cut(s) 160, 831, 846, 1003, 1016, 1131
CviQI GTAC 3 cut(s) 439, 590, 730
DdeI CTNAG 4 cut(s) 63, 179, 531, 1098
DinI GGCGCC 1 cut(s) 472
DpnI GATC 6 cut(s) 376, 550, 678, 825, 947, 1014
DpnII GATC 6 cut(s) 374, 548, 676, 823, 945, 1012
DraIII CACNNNGTG 1 cut(s) 341
DrdI GACNNNNNNGTC 1 cut(s) 826
DriI GACNNNNNGTC 1 cut(s) 123
DseDI GACNNNNNNGTC 1 cut(s) 826
EaeI YGGCCR 1 cut(s) 304
Eam1104I CTCTTC 1 cut(s) 116
Eam1105I GACNNNNNGTC 1 cut(s) 123
EarI CTCTTC 1 cut(s) 116
Ecl136II GAGCTC 1 cut(s) 260
Eco130I CCWWGG 1 cut(s) 113
Eco24I GRGCYC 1 cut(s) 262
Eco32I GATATC 1 cut(s) 70
Eco47I GGWCC 3 cut(s) 293, 329, 1115
Eco53kI GAGCTC 1 cut(s) 260
Eco57I CTGAAG 2 cut(s) 217, 704
Eco88I CYCGRG 1 cut(s) 544
EcoICRI GAGCTC 1 cut(s) 260
EcoO109I RGGNCCY 1 cut(s) 1115
EcoRII CCWGG 4 cut(s) 55, 337, 570, 1117
EcoRV GATATC 1 cut(s) 70
EcoT14I CCWWGG 1 cut(s) 113
EcoT38I GRGCYC 1 cut(s) 262
EgeI GGCGCC 1 cut(s) 472
EheI GGCGCC 1 cut(s) 472
ErhI CCWWGG 1 cut(s) 113
FaeI CATG 6 cut(s) 163, 834, 849, 1006, 1019, 1134
FaqI GGGAC 1 cut(s) 329
FatI CATG 6 cut(s) 159, 830, 845, 1002, 1015, 1130
FauNDI CATATG 1 cut(s) 367
FblI GTMKAC 1 cut(s) 802
Fnu4HI GCNGC 4 cut(s) 25, 1092, 1095, 1104
FokI GGATG 2 cut(s) 92, 774
FriOI GRGCYC 1 cut(s) 262
Fsp4HI GCNGC 4 cut(s) 25, 1092, 1095, 1104
GlaI GCGC 2 cut(s) 47, 472
GluI GCNGC 4 cut(s) 25, 1092, 1095, 1104
GsuI CTGGAG 1 cut(s) 917
HaeII RGCGCY 1 cut(s) 474
HaeIII GGCC 3 cut(s) 306, 603, 754
HapII CCGG 1 cut(s) 21
HgaI GACGC 2 cut(s) 469, 499
HhaI GCGC 2 cut(s) 48, 473
Hin1I GRCGYC 3 cut(s) 471, 480, 510
Hin1II CATG 6 cut(s) 163, 834, 849, 1006, 1019, 1134
Hin6I GCGC 2 cut(s) 46, 471
HinP1I GCGC 2 cut(s) 46, 471
HindIII AAGCTT 3 cut(s) 152, 533, 938
HinfI GANTC 3 cut(s) 124, 142, 542
HpaII CCGG 1 cut(s) 21
HphI GGTGA 2 cut(s) 151, 178
Hpy166II GTNNAC 6 cut(s) 186, 332, 525, 568, 732, 803
Hpy188I TCNGA 1 cut(s) 819
Hpy188III TCNNGA 6 cut(s) 394, 514, 539, 546, 625, 896
Hpy8I GTNNAC 6 cut(s) 186, 332, 525, 568, 732, 803
Hpy99I CGWCG 2 cut(s) 479, 515
HpyAV CCTTC 2 cut(s) 208, 861
HpyCH4III ACNGT 4 cut(s) 88, 670, 688, 813
HpyCH4V TGCA 3 cut(s) 159, 860, 1106
HpyF3I CTNAG 4 cut(s) 63, 179, 531, 1098
Hsp92I GRCGYC 3 cut(s) 471, 480, 510
Hsp92II CATG 6 cut(s) 163, 834, 849, 1006, 1019, 1134
HspAI GCGC 2 cut(s) 46, 471
KasI GGCGCC 1 cut(s) 470
KroI GCCGGC 1 cut(s) 20
KroNI GCCGGC 1 cut(s) 22
Kzo9I GATC 6 cut(s) 374, 548, 676, 823, 945, 1012
LmnI GCTCC 1 cut(s) 265
Lsp1109I GCAGC 3 cut(s) 1081, 1090, 1103
LweI GCATC 2 cut(s) 270, 604
MabI ACCWGGT 1 cut(s) 337
MaeIII GTNAC 3 cut(s) 146, 169, 682
MalI GATC 6 cut(s) 376, 550, 678, 825, 947, 1014
MboI GATC 6 cut(s) 374, 548, 676, 823, 945, 1012
MboII GAAGA 7 cut(s) 133, 529, 571, 710, 994, 1046, 1082
MfeI CAATTG 1 cut(s) 245
MflI RGATCY 2 cut(s) 676, 823
MhlI GDGCHC 1 cut(s) 262
MluCI AATT 5 cut(s) 245, 389, 877, 890, 1044
Mly113I GGCGCC 1 cut(s) 471
MlyI GAGTC 2 cut(s) 133, 536
MreI CGCCGGCG 1 cut(s) 20
MroNI GCCGGC 1 cut(s) 20
MroXI GAANNNNTTC 1 cut(s) 323
MspA1I CMGCKG 1 cut(s) 1094
MspI CCGG 1 cut(s) 21
MspR9I CCNGG 4 cut(s) 57, 339, 572, 1119
MunI CAATTG 1 cut(s) 245
Mva1269I GAATGC 1 cut(s) 403
MvaI CCWGG 4 cut(s) 57, 339, 572, 1119
NaeI GCCGGC 1 cut(s) 22
NarI GGCGCC 1 cut(s) 471
NdeI CATATG 1 cut(s) 367
NdeII GATC 6 cut(s) 374, 548, 676, 823, 945, 1012
NgoMIV GCCGGC 1 cut(s) 20
NlaIII CATG 6 cut(s) 163, 834, 849, 1006, 1019, 1134
NlaIV GGNNCC 3 cut(s) 472, 490, 678
NmeAIII GCCGAG 2 cut(s) 295, 486
NmuCI GTSAC 2 cut(s) 146, 169
PaeR7I CTCGAG 1 cut(s) 544
PcsI WCGNNNNNNNCGW 2 cut(s) 507, 1074
PctI GAATGC 1 cut(s) 403
PdiI GCCGGC 1 cut(s) 22
PdmI GAANNNNTTC 1 cut(s) 323
PfeI GAWTC 1 cut(s) 142
PflMI CCANNNNNTGG 2 cut(s) 302, 338
PkrI GCNGC 4 cut(s) 26, 1093, 1096, 1105
PleI GAGTC 2 cut(s) 132, 536
PluTI GGCGCC 1 cut(s) 474
PpsI GAGTC 2 cut(s) 132, 536
PpuMI RGGWCCY 1 cut(s) 1115
Psp124BI GAGCTC 1 cut(s) 262
Psp5II RGGWCCY 1 cut(s) 1115
Psp6I CCWGG 4 cut(s) 55, 337, 570, 1117
PspGI CCWGG 4 cut(s) 55, 337, 570, 1117
PspN4I GGNNCC 3 cut(s) 472, 490, 678
PspPI GGNCC 3 cut(s) 293, 329, 1115
PspPPI RGGWCCY 1 cut(s) 1115
PstNI CAGNNNCTG 1 cut(s) 1097
PsuI RGATCY 2 cut(s) 676, 823
PvuII CAGCTG 1 cut(s) 1094
RsaI GTAC 3 cut(s) 440, 591, 731
RsaNI GTAC 3 cut(s) 439, 590, 730
SacI GAGCTC 1 cut(s) 262
SatI GCNGC 4 cut(s) 25, 1092, 1095, 1104
Sau3AI GATC 6 cut(s) 374, 548, 676, 823, 945, 1012
Sau96I GGNCC 3 cut(s) 293, 329, 1115
SchI GAGTC 2 cut(s) 133, 536
ScrFI CCNGG 4 cut(s) 57, 339, 572, 1119
SduI GDGCHC 1 cut(s) 262
SexAI ACCWGGT 1 cut(s) 337
SfaNI GCATC 2 cut(s) 270, 604
SfoI GGCGCC 1 cut(s) 472
Sfr274I CTCGAG 1 cut(s) 544
SgrAI CRCCGGYG 1 cut(s) 20
SinI GGWCC 3 cut(s) 293, 329, 1115
SlaI CTCGAG 1 cut(s) 544
SmlI CTYRAG 1 cut(s) 544
SmoI CTYRAG 1 cut(s) 544
Sse9I AATT 5 cut(s) 245, 389, 877, 890, 1044
SsiI CCGC 4 cut(s) 24, 76, 263, 528
SspDI GGCGCC 1 cut(s) 470
SstI GAGCTC 1 cut(s) 262
StyD4I CCNGG 4 cut(s) 55, 337, 570, 1117
StyI CCWWGG 1 cut(s) 113
TaaI ACNGT 4 cut(s) 88, 670, 688, 813
TaqI TCGA 8 cut(s) 9, 240, 393, 435, 513, 545, 1068, 1077
TaqII GACCGA 1 cut(s) 317
TasI AATT 5 cut(s) 245, 389, 877, 890, 1044
TatI WGTACW 1 cut(s) 729
TauI GCSGC 1 cut(s) 27
TfiI GAWTC 1 cut(s) 142
TscAI CASTG 3 cut(s) 178, 558, 816
TseFI GTSAC 2 cut(s) 146, 169
TseI GCWGC 3 cut(s) 1091, 1094, 1103
Tsp45I GTSAC 2 cut(s) 146, 169
TspDTI ATGAA 2 cut(s) 94, 776
TspGWI ACGGA 4 cut(s) 419, 473, 816, 938
TspRI CASTG 3 cut(s) 178, 558, 816
Van91I CCANNNNNTGG 2 cut(s) 302, 338
VpaK11BI GGWCC 3 cut(s) 293, 329, 1115
XapI RAATTY 3 cut(s) 389, 890, 1044
XhoI CTCGAG 1 cut(s) 544
XmiI GTMKAC 1 cut(s) 802
XmnI GAANNNNTTC 1 cut(s) 323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.