Belongs to the histone deacetylase family. HD Type 1 subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0006653.1_g000010 |
| rosa_samantha | Rh3CG297400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 8, 246 |
| AcuI | CTGAAG | 1 cut(s) | 15 |
| AcyI | GRCGYC | 1 cut(s) | 42 |
| AfeI | AGCGCT | 1 cut(s) | 311 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 83, 178, 199 |
| AgsI | TTSAA | 1 cut(s) | 316 |
| AluBI | AGCT | 1 cut(s) | 63 |
| AluI | AGCT | 1 cut(s) | 63 |
| Alw26I | GTCTC | 1 cut(s) | 268 |
| Aor51HI | AGCGCT | 1 cut(s) | 311 |
| AoxI | GGCC | 2 cut(s) | 85, 163 |
| AspLEI | GCGC | 1 cut(s) | 312 |
| AspS9I | GGNCC | 2 cut(s) | 35, 139 |
| AsuC2I | CCSGG | 1 cut(s) | 200 |
| AsuHPI | GGTGA | 1 cut(s) | 161 |
| AvaII | GGWCC | 2 cut(s) | 35, 139 |
| BccI | CCATC | 2 cut(s) | 117, 130 |
| BceAI | ACGGC | 1 cut(s) | 178 |
| BcnI | CCSGG | 1 cut(s) | 200 |
| BcoDI | GTCTC | 1 cut(s) | 268 |
| BfoI | RGCGCY | 1 cut(s) | 313 |
| Bme1390I | CCNGG | 1 cut(s) | 200 |
| Bme18I | GGWCC | 2 cut(s) | 35, 139 |
| BmgT120I | GGNCC | 2 cut(s) | 35, 139 |
| BmrFI | CCNGG | 1 cut(s) | 200 |
| BmsI | GCATC | 1 cut(s) | 7 |
| BpuMI | CCSGG | 1 cut(s) | 200 |
| BsaHI | GRCGYC | 1 cut(s) | 42 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 83, 178, 199 |
| BseGI | GGATG | 1 cut(s) | 109 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 83, 178, 199 |
| BsgI | GTGCAG | 1 cut(s) | 74 |
| BshFI | GGCC | 2 cut(s) | 87, 165 |
| BsiSI | CCGG | 1 cut(s) | 200 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 83, 178, 199 |
| BsmAI | GTCTC | 1 cut(s) | 268 |
| BsmBI | CGTCTC | 1 cut(s) | 268 |
| BsnI | GGCC | 2 cut(s) | 87, 165 |
| BspANI | GGCC | 2 cut(s) | 87, 165 |
| BssNI | GRCGYC | 1 cut(s) | 42 |
| Bst4CI | ACNGT | 1 cut(s) | 173 |
| Bst6I | CTCTTC | 1 cut(s) | 49 |
| BstACI | GRCGYC | 1 cut(s) | 42 |
| BstC8I | GCNNGC | 1 cut(s) | 89 |
| BstF5I | GGATG | 1 cut(s) | 109 |
| BstH2I | RGCGCY | 1 cut(s) | 313 |
| BstHHI | GCGC | 1 cut(s) | 312 |
| BstMAI | GTCTC | 1 cut(s) | 268 |
| BstSCI | CCNGG | 1 cut(s) | 198 |
| BsuRI | GGCC | 2 cut(s) | 87, 165 |
| BtsCI | GGATG | 1 cut(s) | 109 |
| BtsI | GCAGTG | 1 cut(s) | 23 |
| BtsIMutI | CAGTG | 1 cut(s) | 23 |
| Cac8I | GCNNGC | 1 cut(s) | 89 |
| CfoI | GCGC | 1 cut(s) | 312 |
| Cfr13I | GGNCC | 2 cut(s) | 35, 139 |
| CseI | GACGC | 1 cut(s) | 50 |
| CviAII | CATG | 1 cut(s) | 104 |
| CviJI | RGCY | 4 cut(s) | 63, 87, 165, 203 |
| CviKI_1 | RGCY | 4 cut(s) | 63, 87, 165, 203 |
| Eam1104I | CTCTTC | 1 cut(s) | 49 |
| EarI | CTCTTC | 1 cut(s) | 49 |
| Eco47I | GGWCC | 2 cut(s) | 35, 139 |
| Eco47III | AGCGCT | 1 cut(s) | 311 |
| Eco57I | CTGAAG | 1 cut(s) | 15 |
| Esp3I | CGTCTC | 1 cut(s) | 268 |
| FaeI | CATG | 1 cut(s) | 107 |
| FaiI | YATR | 2 cut(s) | 105, 328 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 36, 296, 328 |
| FatI | CATG | 1 cut(s) | 103 |
| FblI | GTMKAC | 2 cut(s) | 8, 246 |
| FokI | GGATG | 1 cut(s) | 96 |
| GlaI | GCGC | 1 cut(s) | 311 |
| HaeII | RGCGCY | 1 cut(s) | 313 |
| HaeIII | GGCC | 2 cut(s) | 87, 165 |
| HapII | CCGG | 1 cut(s) | 200 |
| HgaI | GACGC | 1 cut(s) | 50 |
| HhaI | GCGC | 1 cut(s) | 312 |
| Hin1I | GRCGYC | 1 cut(s) | 42 |
| Hin1II | CATG | 1 cut(s) | 107 |
| Hin6I | GCGC | 1 cut(s) | 310 |
| HinP1I | GCGC | 1 cut(s) | 310 |
| HincII | GTYRAC | 2 cut(s) | 157, 247 |
| HindII | GTYRAC | 2 cut(s) | 157, 247 |
| HinfI | GANTC | 1 cut(s) | 5 |
| HpaII | CCGG | 1 cut(s) | 200 |
| HphI | GGTGA | 1 cut(s) | 161 |
| Hpy166II | GTNNAC | 4 cut(s) | 9, 142, 157, 247 |
| Hpy188I | TCNGA | 1 cut(s) | 235 |
| Hpy188III | TCNNGA | 1 cut(s) | 33 |
| Hpy8I | GTNNAC | 4 cut(s) | 9, 142, 157, 247 |
| Hpy99I | CGWCG | 2 cut(s) | 215, 248 |
| HpyAV | CCTTC | 2 cut(s) | 39, 176 |
| HpyCH4III | ACNGT | 1 cut(s) | 173 |
| HpyCH4IV | ACGT | 1 cut(s) | 243 |
| HpyCH4V | TGCA | 1 cut(s) | 91 |
| HpySE526I | ACGT | 1 cut(s) | 243 |
| Hsp92I | GRCGYC | 1 cut(s) | 42 |
| Hsp92II | CATG | 1 cut(s) | 107 |
| HspAI | GCGC | 1 cut(s) | 310 |
| LmnI | GCTCC | 2 cut(s) | 307, 325 |
| LpnPI | CCDG | 5 cut(s) | 18, 51, 58, 101, 213 |
| LweI | GCATC | 1 cut(s) | 7 |
| MaeII | ACGT | 1 cut(s) | 243 |
| MboII | GAAGA | 1 cut(s) | 66 |
| MluCI | AATT | 1 cut(s) | 224 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MnlI | CCTC | 3 cut(s) | 158, 263, 268 |
| MseI | TTAA | 1 cut(s) | 279 |
| MslI | CAYNNNNRTG | 2 cut(s) | 134, 234 |
| MspI | CCGG | 1 cut(s) | 200 |
| MspR9I | CCNGG | 1 cut(s) | 200 |
| NciI | CCSGG | 1 cut(s) | 200 |
| NlaIII | CATG | 1 cut(s) | 107 |
| PflFI | GACNNNGTC | 2 cut(s) | 104, 242 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| PspPI | GGNCC | 2 cut(s) | 35, 139 |
| PsyI | GACNNNGTC | 2 cut(s) | 104, 242 |
| RseI | CAYNNNNRTG | 2 cut(s) | 134, 234 |
| SalI | GTCGAC | 1 cut(s) | 245 |
| SaqAI | TTAA | 1 cut(s) | 279 |
| Sau96I | GGNCC | 2 cut(s) | 35, 139 |
| SchI | GAGTC | 1 cut(s) | 14 |
| ScrFI | CCNGG | 1 cut(s) | 200 |
| SetI | ASST | 4 cut(s) | 65, 150, 219, 246 |
| SfaNI | GCATC | 1 cut(s) | 7 |
| SinI | GGWCC | 2 cut(s) | 35, 139 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 134, 234 |
| Sse9I | AATT | 1 cut(s) | 224 |
| StyD4I | CCNGG | 1 cut(s) | 198 |
| TaaI | ACNGT | 1 cut(s) | 173 |
| TaiI | ACGT | 1 cut(s) | 246 |
| TaqI | TCGA | 1 cut(s) | 246 |
| TasI | AATT | 1 cut(s) | 224 |
| Tru1I | TTAA | 1 cut(s) | 279 |
| Tru9I | TTAA | 1 cut(s) | 279 |
| TscAI | CASTG | 1 cut(s) | 30 |
| TspDTI | ATGAA | 1 cut(s) | 131 |
| TspGWI | ACGGA | 1 cut(s) | 250 |
| TspRI | CASTG | 1 cut(s) | 30 |
| Tth111I | GACNNNGTC | 2 cut(s) | 104, 242 |
| VpaK11BI | GGWCC | 2 cut(s) | 35, 139 |
| XmiI | GTMKAC | 2 cut(s) | 8, 246 |