Rmu_sc0008007.1_g000003

Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln)

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008007.1
Physical Location & Seq
Reverse (-)
17496 .. 18420
925 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008007.1_g000003.1.cds

Sequence Viewer

Length: 360 bp
atgccttccacggcgggctaccaatttggtttggactttgggatgggtagcaccgccgaagccgacggctccgcctttcaggttttggatgttctgggtcgtgcatctgttgcttcattagatgactgcaagcctatgggacacgacacgggtgccggagggtcatcaggagaggcataccaacgtatcggcgtgtatcgaggtttggcctcatcacttgatgttattggttgctttggaacatctgttcctgatgctgggattcttcttcatgcaatttctggtcatcatagacttgatgcccagcagcaagcgtgcaagtgtttttctaagtacagtaccatgtttaccaattcttga

Protein Analysis

119

Amino Acids

12.3

Weight (kDa)

5.31

Isoelectric Point (pI)

15.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 152
AciI CCGC 3 cut(s) 14, 54, 72
AfaI GTAC 2 cut(s) 335, 340
AfiI CCNNNNNNNGG 1 cut(s) 257
AloI GAACNNNNNNTCC 4 cut(s) 231, 232, 263, 264
AoxI GGCC 1 cut(s) 207
ApeKI GCWGC 1 cut(s) 307
BaeI ACNNNNGTAYC 2 cut(s) 169, 202
BanI GGYRCC 1 cut(s) 152
BbvI GCAGC 1 cut(s) 319
BccI CCATC 1 cut(s) 37
BceAI ACGGC 2 cut(s) 27, 82
BcgI CGANNNNNNTGC 2 cut(s) 134, 168
BisI GCNGC 1 cut(s) 308
BlsI GCNGC 1 cut(s) 309
BmiI GGNNCC 2 cut(s) 70, 154
BmsI GCATC 3 cut(s) 113, 244, 289
BsaJI CCNNGG 1 cut(s) 9
Bsc4I CCNNNNNNNGG 1 cut(s) 257
BseDI CCNNGG 1 cut(s) 9
BseGI GGATG 2 cut(s) 48, 94
BseLI CCNNNNNNNGG 1 cut(s) 257
BseXI GCAGC 1 cut(s) 319
BseYI CCCAGC 2 cut(s) 257, 303
BshFI GGCC 1 cut(s) 209
BshNI GGYRCC 1 cut(s) 152
BsiSI CCGG 1 cut(s) 156
BslFI GGGAC 1 cut(s) 153
BslI CCNNNNNNNGG 1 cut(s) 257
BsmFI GGGAC 1 cut(s) 153
BsnI GGCC 1 cut(s) 209
BspACI CCGC 3 cut(s) 14, 54, 72
BspANI GGCC 1 cut(s) 209
BspLI GGNNCC 2 cut(s) 70, 154
BspT107I GGYRCC 1 cut(s) 152
BssECI CCNNGG 1 cut(s) 9
Bst4CI ACNGT 1 cut(s) 338
BstAPI GCANNNNNTGC 1 cut(s) 110
BstC8I GCNNGC 4 cut(s) 16, 131, 312, 316
BstDEI CTNAG 1 cut(s) 330
BstDSI CCRYGG 1 cut(s) 9
BstF5I GGATG 2 cut(s) 48, 94
BstMWI GCNNNNNNNGC 1 cut(s) 110
BstV1I GCAGC 1 cut(s) 319
BsuRI GGCC 1 cut(s) 209
BtgI CCRYGG 1 cut(s) 9
BtsCI GGATG 2 cut(s) 48, 94
Cac8I GCNNGC 4 cut(s) 16, 131, 312, 316
Csp6I GTAC 2 cut(s) 334, 339
CviAII CATG 2 cut(s) 272, 343
CviJI RGCY 5 cut(s) 18, 62, 69, 133, 209
CviKI_1 RGCY 5 cut(s) 18, 62, 69, 133, 209
CviQI GTAC 2 cut(s) 334, 339
DdeI CTNAG 1 cut(s) 330
EciI GGCGGA 1 cut(s) 61
FaeI CATG 2 cut(s) 275, 346
FaiI YATR 5 cut(s) 137, 178, 273, 291, 344
FaqI GGGAC 1 cut(s) 153
FatI CATG 2 cut(s) 271, 342
FauI CCCGC 1 cut(s) 7
Fnu4HI GCNGC 1 cut(s) 308
FokI GGATG 2 cut(s) 55, 101
Fsp4HI GCNGC 1 cut(s) 308
GluI GCNGC 1 cut(s) 308
GsaI CCCAGC 2 cut(s) 261, 307
HaeIII GGCC 1 cut(s) 209
HapII CCGG 1 cut(s) 156
Hin1II CATG 2 cut(s) 275, 346
HinfI GANTC 1 cut(s) 262
HpaII CCGG 1 cut(s) 156
Hpy166II GTNNAC 1 cut(s) 348
Hpy188III TCNNGA 3 cut(s) 168, 251, 357
Hpy8I GTNNAC 1 cut(s) 348
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 1 cut(s) 15
HpyCH4III ACNGT 1 cut(s) 338
HpyCH4IV ACGT 1 cut(s) 184
HpyCH4V TGCA 4 cut(s) 104, 129, 275, 318
HpyF10VI GCNNNNNNNGC 1 cut(s) 110
HpyF3I CTNAG 1 cut(s) 330
HpySE526I ACGT 1 cut(s) 184
Hsp92II CATG 2 cut(s) 275, 346
LmnI GCTCC 1 cut(s) 74
LpnPI CCDG 8 cut(s) 65, 80, 153, 169, 243, 264, 267, 317
Lsp1109I GCAGC 1 cut(s) 319
LweI GCATC 3 cut(s) 113, 244, 289
MaeII ACGT 1 cut(s) 184
MboII GAAGA 2 cut(s) 257, 260
MluCI AATT 3 cut(s) 23, 276, 352
MnlI CCTC 4 cut(s) 152, 166, 194, 220
MspI CCGG 1 cut(s) 156
MwoI GCNNNNNNNGC 1 cut(s) 110
NlaIII CATG 2 cut(s) 275, 346
NlaIV GGNNCC 2 cut(s) 70, 154
PfeI GAWTC 1 cut(s) 262
PkrI GCNGC 1 cut(s) 309
PspFI CCCAGC 2 cut(s) 257, 303
PspN4I GGNNCC 2 cut(s) 70, 154
RsaI GTAC 2 cut(s) 335, 340
RsaNI GTAC 2 cut(s) 334, 339
SatI GCNGC 1 cut(s) 308
SetI ASST 3 cut(s) 84, 187, 205
SfaNI GCATC 3 cut(s) 113, 244, 289
Sse9I AATT 3 cut(s) 23, 276, 352
SsiI CCGC 3 cut(s) 14, 54, 72
TaaI ACNGT 1 cut(s) 338
TaiI ACGT 1 cut(s) 187
TaqI TCGA 1 cut(s) 199
TasI AATT 3 cut(s) 23, 276, 352
TatI WGTACW 1 cut(s) 333
TfiI GAWTC 1 cut(s) 262
TseI GCWGC 1 cut(s) 307
TspDTI ATGAA 2 cut(s) 105, 260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.