Rmu_sc0014922.1_g000002

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0014922.1
Physical Location & Seq
Forward (+)
15823 .. 16116
294 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0014922.1_g000002.1.cds

Sequence Viewer

Length: 294 bp
atggatgattcgctccagtacgagtgtatgaatgaagaagaccccaaaaggctgtgggcctcactcgaagaaagatttggcaacgtccgtgactccctgcttcctgacctagaagtgagatggcatagcctcagtttctgtgatttcaagtcagttcttgaatacaacttagaaacactttgcattaaatctttaatggaattctgtggtaaagagatcacagatgcgatgttgattgagaaaactctttctaccttctccgtctctacattgatggttgctaagaactattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

11.34

Weight (kDa)

4.51

Isoelectric Point (pI)

50.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0023032)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 200
AfaI GTAC 1 cut(s) 20
AgsI TTSAA 2 cut(s) 148, 161
AjuI GAANNNNNNNTTGG 2 cut(s) 60, 92
Alw26I GTCTC 1 cut(s) 268
AlwNI CAGNNNCTG 1 cut(s) 138
AoxI GGCC 1 cut(s) 57
ApoI RAATTY 1 cut(s) 200
AspS9I GGNCC 1 cut(s) 57
BbsI GAAGAC 1 cut(s) 45
BccI CCATC 2 cut(s) 114, 268
BcoDI GTCTC 1 cut(s) 268
BfaI CTAG 1 cut(s) 110
BmgT120I GGNCC 1 cut(s) 57
BmsI GCATC 1 cut(s) 214
BpiI GAAGAC 1 cut(s) 45
Bse1I ACTGG 1 cut(s) 16
BseGI GGATG 1 cut(s) 10
BseMII CTCAG 1 cut(s) 145
BseNI ACTGG 1 cut(s) 16
BshFI GGCC 1 cut(s) 59
BsmAI GTCTC 1 cut(s) 268
BsmBI CGTCTC 1 cut(s) 268
BsnI GGCC 1 cut(s) 59
Bsp143I GATC 1 cut(s) 216
BspANI GGCC 1 cut(s) 59
BspCNI CTCAG 1 cut(s) 144
BsrI ACTGG 1 cut(s) 16
BssMI GATC 1 cut(s) 216
BstDEI CTNAG 3 cut(s) 131, 169, 282
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 1 cut(s) 219
BstMAI GTCTC 1 cut(s) 268
BstMBI GATC 1 cut(s) 216
BstV2I GAAGAC 1 cut(s) 45
BsuRI GGCC 1 cut(s) 59
BtgZI GCGATG 1 cut(s) 242
BtsCI GGATG 1 cut(s) 10
CaiI CAGNNNCTG 1 cut(s) 138
Cfr13I GGNCC 1 cut(s) 57
Csp6I GTAC 1 cut(s) 19
CviJI RGCY 3 cut(s) 52, 59, 129
CviKI_1 RGCY 3 cut(s) 52, 59, 129
CviQI GTAC 1 cut(s) 19
DdeI CTNAG 3 cut(s) 131, 169, 282
DpnI GATC 1 cut(s) 218
DpnII GATC 1 cut(s) 216
EcoRI GAATTC 1 cut(s) 200
Esp3I CGTCTC 1 cut(s) 268
FaiI YATR 2 cut(s) 29, 126
FokI GGATG 1 cut(s) 17
FspBI CTAG 1 cut(s) 110
HaeIII GGCC 1 cut(s) 59
HinfI GANTC 2 cut(s) 8, 92
Hpy188III TCNNGA 2 cut(s) 104, 158
HpyAV CCTTC 1 cut(s) 265
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 1 cut(s) 183
HpyF3I CTNAG 3 cut(s) 131, 169, 282
HpySE526I ACGT 1 cut(s) 84
Kzo9I GATC 1 cut(s) 216
LmnI GCTCC 1 cut(s) 18
LpnPI CCDG 3 cut(s) 29, 110, 117
LweI GCATC 1 cut(s) 214
MaeI CTAG 1 cut(s) 110
MaeII ACGT 1 cut(s) 84
MaeIII GTNAC 1 cut(s) 89
MalI GATC 1 cut(s) 218
MboI GATC 1 cut(s) 216
MboII GAAGA 3 cut(s) 47, 50, 80
MluCI AATT 1 cut(s) 200
MlyI GAGTC 1 cut(s) 86
MnlI CCTC 2 cut(s) 70, 140
MseI TTAA 2 cut(s) 186, 194
NdeII GATC 1 cut(s) 216
NmuCI GTSAC 1 cut(s) 89
PfeI GAWTC 1 cut(s) 8
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
PspPI GGNCC 1 cut(s) 57
PstNI CAGNNNCTG 1 cut(s) 138
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
SaqAI TTAA 2 cut(s) 186, 194
Sau3AI GATC 1 cut(s) 216
Sau96I GGNCC 1 cut(s) 57
SchI GAGTC 1 cut(s) 86
SetI ASST 3 cut(s) 87, 111, 257
SfaNI GCATC 1 cut(s) 214
SgeI CNNG 9 cut(s) 28, 34, 77, 101, 109, 116, 122, 160, 170
Sse9I AATT 1 cut(s) 200
SspMI CTAG 1 cut(s) 110
TaiI ACGT 1 cut(s) 87
TaqI TCGA 1 cut(s) 66
TasI AATT 1 cut(s) 200
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 2 cut(s) 186, 194
Tru9I TTAA 2 cut(s) 186, 194
TseFI GTSAC 1 cut(s) 89
Tsp45I GTSAC 1 cut(s) 89
TspDTI ATGAA 2 cut(s) 44, 48
TspGWI ACGGA 2 cut(s) 77, 250
XapI RAATTY 1 cut(s) 200
XspI CTAG 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.