Rh2BG254900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
26351246 .. 26351539
294 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG254900.1

Sequence Viewer

Length: 294 bp
ATGGATGATTCGCTCCAGTACGAGTGTATGAATGAAGAAGACCCAAGAAGGTTGTGGGTCTCATTTGAAGAAAGATTTGGCAACGTCCGTGACTCCTTGCTTCTTGACCTAGAAGTGAGATGGCATAGCCTCCAATTCTGTGATTTCAAGTCAGTTCTTAACTACAACTCAGAAGTACTTCGTATTAAATCCTTCATTGAATTTTGTGTTGAAGAGATCACAGATGCGATGTTGATTGAGAAGACTCTCTCTACCTTCTCCGACTCTGCATTGATGGTTGCTAAGAACTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

11.54

Weight (kDa)

4.44

Isoelectric Point (pI)

68.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0023032)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 200
AfaI GTAC 2 cut(s) 20, 177
AgsI TTSAA 4 cut(s) 68, 148, 200, 212
AjuI GAANNNNNNNTTGG 2 cut(s) 60, 92
Alw26I GTCTC 1 cut(s) 64
ApoI RAATTY 1 cut(s) 200
Asp700I GAANNNNTTC 1 cut(s) 177
BbsI GAAGAC 2 cut(s) 45, 248
BccI CCATC 2 cut(s) 114, 268
BcoDI GTCTC 1 cut(s) 64
BfaI CTAG 1 cut(s) 110
BmcAI AGTACT 1 cut(s) 177
BmsI GCATC 1 cut(s) 214
BpiI GAAGAC 2 cut(s) 45, 248
BsaI GGTCTC 1 cut(s) 64
Bse1I ACTGG 1 cut(s) 16
BseGI GGATG 1 cut(s) 10
BseMII CTCAG 1 cut(s) 183
BseNI ACTGG 1 cut(s) 16
BsmAI GTCTC 1 cut(s) 64
Bso31I GGTCTC 1 cut(s) 64
Bsp143I GATC 1 cut(s) 216
BspCNI CTCAG 1 cut(s) 182
BspTNI GGTCTC 1 cut(s) 64
BsrI ACTGG 1 cut(s) 16
BssMI GATC 1 cut(s) 216
Bst6I CTCTTC 1 cut(s) 207
BstDEI CTNAG 2 cut(s) 169, 282
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 1 cut(s) 219
BstMAI GTCTC 1 cut(s) 64
BstMBI GATC 1 cut(s) 216
BstV2I GAAGAC 2 cut(s) 45, 248
BtgZI GCGATG 1 cut(s) 242
BtsCI GGATG 1 cut(s) 10
Csp6I GTAC 2 cut(s) 19, 176
CviJI RGCY 1 cut(s) 129
CviKI_1 RGCY 1 cut(s) 129
CviQI GTAC 2 cut(s) 19, 176
DdeI CTNAG 2 cut(s) 169, 282
DpnI GATC 1 cut(s) 218
DpnII GATC 1 cut(s) 216
Eam1104I CTCTTC 1 cut(s) 207
EarI CTCTTC 1 cut(s) 207
Eco31I GGTCTC 1 cut(s) 64
FaiI YATR 2 cut(s) 29, 126
FokI GGATG 1 cut(s) 17
FspBI CTAG 1 cut(s) 110
HinfI GANTC 4 cut(s) 8, 92, 244, 263
Hpy188I TCNGA 2 cut(s) 172, 262
Hpy188III TCNNGA 1 cut(s) 104
HpyAV CCTTC 3 cut(s) 42, 202, 265
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 1 cut(s) 269
HpyF3I CTNAG 2 cut(s) 169, 282
HpySE526I ACGT 1 cut(s) 84
Kzo9I GATC 1 cut(s) 216
LmnI GCTCC 1 cut(s) 18
LpnPI CCDG 1 cut(s) 29
LweI GCATC 1 cut(s) 214
MaeI CTAG 1 cut(s) 110
MaeII ACGT 1 cut(s) 84
MaeIII GTNAC 1 cut(s) 89
MalI GATC 1 cut(s) 218
MboI GATC 1 cut(s) 216
MboII GAAGA 5 cut(s) 47, 50, 80, 224, 253
MluCI AATT 2 cut(s) 134, 200
MlyI GAGTC 3 cut(s) 86, 238, 257
MmeI TCCRAC 1 cut(s) 285
MnlI CCTC 1 cut(s) 140
MroXI GAANNNNTTC 1 cut(s) 177
MseI TTAA 2 cut(s) 159, 186
NdeII GATC 1 cut(s) 216
NmuCI GTSAC 1 cut(s) 89
PdmI GAANNNNTTC 1 cut(s) 177
PfeI GAWTC 1 cut(s) 8
PleI GAGTC 3 cut(s) 86, 238, 257
PpsI GAGTC 3 cut(s) 86, 238, 257
RsaI GTAC 2 cut(s) 20, 177
RsaNI GTAC 2 cut(s) 19, 176
SaqAI TTAA 2 cut(s) 159, 186
Sau3AI GATC 1 cut(s) 216
ScaI AGTACT 1 cut(s) 177
SchI GAGTC 3 cut(s) 86, 238, 257
SetI ASST 4 cut(s) 53, 87, 111, 257
SfaNI GCATC 1 cut(s) 214
SgeI CNNG 8 cut(s) 28, 34, 57, 101, 109, 116, 122, 160
Sse9I AATT 2 cut(s) 134, 200
SspMI CTAG 1 cut(s) 110
TaiI ACGT 1 cut(s) 87
TasI AATT 2 cut(s) 134, 200
TatI WGTACW 1 cut(s) 175
TfiI GAWTC 1 cut(s) 8
Tru1I TTAA 2 cut(s) 159, 186
Tru9I TTAA 2 cut(s) 159, 186
TseFI GTSAC 1 cut(s) 89
Tsp45I GTSAC 1 cut(s) 89
TspDTI ATGAA 3 cut(s) 44, 48, 184
TspGWI ACGGA 1 cut(s) 77
XapI RAATTY 1 cut(s) 200
XcmI CCANNNNNNNNNTGG 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 177
XspI CTAG 1 cut(s) 110
ZrmI AGTACT 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.