Chloroplastic group IIA intron splicing facilitator CRS1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000331.1_g000006 Rmu_sc0004836.1_g000002 Rmu_sc0017886.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 116 |
| AgsI | TTSAA | 3 cut(s) | 131, 254, 341 |
| AhlI | ACTAGT | 1 cut(s) | 318 |
| AluBI | AGCT | 3 cut(s) | 183, 314, 373 |
| AluI | AGCT | 3 cut(s) | 183, 314, 373 |
| Alw26I | GTCTC | 1 cut(s) | 313 |
| Aor13HI | TCCGGA | 1 cut(s) | 116 |
| ApeKI | GCWGC | 1 cut(s) | 183 |
| AsuHPI | GGTGA | 1 cut(s) | 54 |
| BbvI | GCAGC | 1 cut(s) | 170 |
| BcoDI | GTCTC | 1 cut(s) | 313 |
| BcuI | ACTAGT | 1 cut(s) | 318 |
| BfaI | CTAG | 1 cut(s) | 319 |
| BglII | AGATCT | 1 cut(s) | 79 |
| BisI | GCNGC | 1 cut(s) | 184 |
| BlsI | GCNGC | 1 cut(s) | 185 |
| BmiI | GGNNCC | 1 cut(s) | 265 |
| BmsI | GCATC | 4 cut(s) | 117, 200, 307, 339 |
| BoxI | GACNNNNGTC | 1 cut(s) | 174 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 255, 287 |
| Bpu10I | CCTNAGC | 1 cut(s) | 138 |
| BsaJI | CCNNGG | 1 cut(s) | 27 |
| BsaWI | WCCGGW | 1 cut(s) | 116 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 111, 141 |
| BseAI | TCCGGA | 1 cut(s) | 116 |
| BseDI | CCNNGG | 1 cut(s) | 27 |
| BseGI | GGATG | 4 cut(s) | 108, 163, 215, 242 |
| BseMII | CTCAG | 1 cut(s) | 324 |
| BseRI | GAGGAG | 1 cut(s) | 276 |
| BseXI | GCAGC | 1 cut(s) | 170 |
| BsiSI | CCGG | 1 cut(s) | 117 |
| BsmAI | GTCTC | 1 cut(s) | 313 |
| Bsp13I | TCCGGA | 1 cut(s) | 116 |
| Bsp143I | GATC | 1 cut(s) | 79 |
| BspCNI | CTCAG | 1 cut(s) | 323 |
| BspEI | TCCGGA | 1 cut(s) | 116 |
| BspLI | GGNNCC | 1 cut(s) | 265 |
| BssECI | CCNNGG | 1 cut(s) | 27 |
| BssMI | GATC | 1 cut(s) | 79 |
| BssT1I | CCWWGG | 1 cut(s) | 27 |
| Bst6I | CTCTTC | 1 cut(s) | 126 |
| BstDEI | CTNAG | 3 cut(s) | 138, 302, 310 |
| BstF5I | GGATG | 4 cut(s) | 108, 163, 215, 242 |
| BstKTI | GATC | 1 cut(s) | 82 |
| BstMAI | GTCTC | 1 cut(s) | 313 |
| BstMBI | GATC | 1 cut(s) | 79 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 174 |
| BstV1I | GCAGC | 1 cut(s) | 170 |
| BstX2I | RGATCY | 1 cut(s) | 79 |
| BstYI | RGATCY | 1 cut(s) | 79 |
| BtsCI | GGATG | 4 cut(s) | 108, 163, 215, 242 |
| CviAII | CATG | 5 cut(s) | 9, 123, 219, 281, 294 |
| CviJI | RGCY | 5 cut(s) | 137, 183, 266, 314, 373 |
| CviKI_1 | RGCY | 5 cut(s) | 137, 183, 266, 314, 373 |
| DdeI | CTNAG | 3 cut(s) | 138, 302, 310 |
| DpnI | GATC | 1 cut(s) | 81 |
| DpnII | GATC | 1 cut(s) | 79 |
| Eam1104I | CTCTTC | 1 cut(s) | 126 |
| EarI | CTCTTC | 1 cut(s) | 126 |
| Eco130I | CCWWGG | 1 cut(s) | 27 |
| Eco32I | GATATC | 1 cut(s) | 191 |
| EcoRV | GATATC | 1 cut(s) | 191 |
| EcoT14I | CCWWGG | 1 cut(s) | 27 |
| ErhI | CCWWGG | 1 cut(s) | 27 |
| FaeI | CATG | 5 cut(s) | 12, 126, 222, 284, 297 |
| FaiI | YATR | 8 cut(s) | 10, 124, 216, 220, 282, 295, 376, 383 |
| FatI | CATG | 5 cut(s) | 8, 122, 218, 280, 293 |
| Fnu4HI | GCNGC | 1 cut(s) | 184 |
| FokI | GGATG | 4 cut(s) | 95, 170, 222, 249 |
| Fsp4HI | GCNGC | 1 cut(s) | 184 |
| FspBI | CTAG | 1 cut(s) | 319 |
| GluI | GCNGC | 1 cut(s) | 184 |
| HapII | CCGG | 1 cut(s) | 117 |
| Hin1II | CATG | 5 cut(s) | 12, 126, 222, 284, 297 |
| HinfI | GANTC | 2 cut(s) | 3, 306 |
| HpaII | CCGG | 1 cut(s) | 117 |
| HphI | GGTGA | 1 cut(s) | 54 |
| Hpy188I | TCNGA | 1 cut(s) | 180 |
| Hpy188III | TCNNGA | 2 cut(s) | 83, 117 |
| HpyAV | CCTTC | 4 cut(s) | 33, 54, 123, 224 |
| HpyCH4V | TGCA | 1 cut(s) | 352 |
| HpyF3I | CTNAG | 3 cut(s) | 138, 302, 310 |
| Hsp92II | CATG | 5 cut(s) | 12, 126, 222, 284, 297 |
| Kpn2I | TCCGGA | 1 cut(s) | 116 |
| Kzo9I | GATC | 1 cut(s) | 79 |
| LmnI | GCTCC | 3 cut(s) | 119, 180, 263 |
| LpnPI | CCDG | 3 cut(s) | 68, 130, 183 |
| Lsp1109I | GCAGC | 1 cut(s) | 170 |
| LweI | GCATC | 4 cut(s) | 117, 200, 307, 339 |
| MaeI | CTAG | 1 cut(s) | 319 |
| MalI | GATC | 1 cut(s) | 81 |
| MboI | GATC | 1 cut(s) | 79 |
| MboII | GAAGA | 1 cut(s) | 143 |
| MflI | RGATCY | 1 cut(s) | 79 |
| MluCI | AATT | 2 cut(s) | 45, 341 |
| MlyI | GAGTC | 1 cut(s) | 315 |
| MmeI | TCCRAC | 2 cut(s) | 142, 158 |
| MnlI | CCTC | 4 cut(s) | 98, 127, 148, 254 |
| MroI | TCCGGA | 1 cut(s) | 116 |
| MseI | TTAA | 2 cut(s) | 277, 389 |
| MspA1I | CMGCKG | 1 cut(s) | 314 |
| MspI | CCGG | 1 cut(s) | 117 |
| NdeII | GATC | 1 cut(s) | 79 |
| NlaIII | CATG | 5 cut(s) | 12, 126, 222, 284, 297 |
| NlaIV | GGNNCC | 1 cut(s) | 265 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 184 |
| PfeI | GAWTC | 1 cut(s) | 3 |
| PkrI | GCNGC | 1 cut(s) | 185 |
| PleI | GAGTC | 1 cut(s) | 314 |
| PpsI | GAGTC | 1 cut(s) | 314 |
| PshAI | GACNNNNGTC | 1 cut(s) | 174 |
| PspN4I | GGNNCC | 1 cut(s) | 265 |
| PsuI | RGATCY | 1 cut(s) | 79 |
| PvuII | CAGCTG | 1 cut(s) | 314 |
| SaqAI | TTAA | 2 cut(s) | 277, 389 |
| SatI | GCNGC | 1 cut(s) | 184 |
| Sau3AI | GATC | 1 cut(s) | 79 |
| SchI | GAGTC | 1 cut(s) | 315 |
| SetI | ASST | 6 cut(s) | 44, 65, 185, 235, 316, 375 |
| SfaNI | GCATC | 4 cut(s) | 117, 200, 307, 339 |
| SpeI | ACTAGT | 1 cut(s) | 318 |
| Sse9I | AATT | 2 cut(s) | 45, 341 |
| SspMI | CTAG | 1 cut(s) | 319 |
| StyI | CCWWGG | 1 cut(s) | 27 |
| TasI | AATT | 2 cut(s) | 45, 341 |
| TfiI | GAWTC | 1 cut(s) | 3 |
| Tru1I | TTAA | 2 cut(s) | 277, 389 |
| Tru9I | TTAA | 2 cut(s) | 277, 389 |
| TseI | GCWGC | 1 cut(s) | 183 |
| TspDTI | ATGAA | 2 cut(s) | 253, 297 |
| XspI | CTAG | 1 cut(s) | 319 |