Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0025846.1

Orthogroup ID

OG0031080

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 738

Gene Structure 738 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0025846.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 268 bp

aatccaaaggttgacaaagttgattttggtctccacaaaagcaacacagccatcaaggtttcctcaccgacctggtcttaggagaagacattcctttggggaagaggagcttgcatatctaccatacaaaaggcgggacttgattttagaggatgaaaacattgacttgtttgtttctcctcttgaggggaatactgaaactgctgatgcgctgaaggaggataagaagactcggaagcatggactgttaaactggttaaagctacgg

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0006928 GO:0007017 GO:0007018 GO:0008150 GO:0009987 GO:0015630 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0032991 GO:0035371 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

89

Amino Acids

10.48

Weight (kDa)

9.81

Isoelectric Point (pI)

70.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0031080)

Species	Orthologous Gene IDs
rosa_multiflora	Rmu_sc0000546.1_g000057 Rmu_sc0025846.1_g000001

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	134
AcuI	CTGAAG	1 cut(s)	234
AfiI	CCNNNNNNNGG	1 cut(s)	186
AjnI	CCWGG	1 cut(s)	71
AluBI	AGCT	2 cut(s)	110, 263
AluI	AGCT	2 cut(s)	110, 263
Alw26I	GTCTC	1 cut(s)	35
Asp700I	GAANNNNTTC	1 cut(s)	89
AspLEI	GCGC	1 cut(s)	212
AsuHPI	GGTGA	1 cut(s)	57
BbsI	GAAGAC	2 cut(s)	92, 234
BccI	CCATC	1 cut(s)	59
BciT130I	CCWGG	1 cut(s)	73
BcoDI	GTCTC	1 cut(s)	35
Bme1390I	CCNGG	1 cut(s)	73
BmrFI	CCNGG	1 cut(s)	73
BmsI	GCATC	1 cut(s)	197
BpiI	GAAGAC	2 cut(s)	92, 234
BpuEI	CTTGAG	1 cut(s)	204
BsaI	GGTCTC	1 cut(s)	35
Bsc4I	CCNNNNNNNGG	1 cut(s)	186
Bse1I	ACTGG	1 cut(s)	258
BseBI	CCWGG	1 cut(s)	73
BseGI	GGATG	1 cut(s)	158
BseLI	CCNNNNNNNGG	1 cut(s)	186
BseNI	ACTGG	1 cut(s)	258
BseRI	GAGGAG	2 cut(s)	120, 169
BslFI	GGGAC	1 cut(s)	150
BslI	CCNNNNNNNGG	1 cut(s)	186
BsmAI	GTCTC	1 cut(s)	35
BsmFI	GGGAC	1 cut(s)	150
Bso31I	GGTCTC	1 cut(s)	35
BspACI	CCGC	1 cut(s)	134
BspTNI	GGTCTC	1 cut(s)	35
BsrI	ACTGG	1 cut(s)	258
Bst2UI	CCWGG	1 cut(s)	73
Bst4CI	ACNGT	1 cut(s)	247
Bst6I	CTCTTC	1 cut(s)	97
BstC8I	GCNNGC	1 cut(s)	112
BstDEI	CTNAG	1 cut(s)	78
BstF5I	GGATG	1 cut(s)	158
BstHHI	GCGC	1 cut(s)	212
BstMAI	GTCTC	1 cut(s)	35
BstNI	CCWGG	1 cut(s)	73
BstSCI	CCNGG	1 cut(s)	71
BstV2I	GAAGAC	2 cut(s)	92, 234
BtsCI	GGATG	1 cut(s)	158
Cac8I	GCNNGC	1 cut(s)	112
CfoI	GCGC	1 cut(s)	212
CsiI	ACCWGGT	1 cut(s)	71
CviAII	CATG	1 cut(s)	240
CviJI	RGCY	3 cut(s)	50, 110, 263
CviKI_1	RGCY	3 cut(s)	50, 110, 263
DdeI	CTNAG	1 cut(s)	78
Eam1104I	CTCTTC	1 cut(s)	97
EarI	CTCTTC	1 cut(s)	97
Eco31I	GGTCTC	1 cut(s)	35
Eco57I	CTGAAG	1 cut(s)	234
EcoRII	CCWGG	1 cut(s)	71
FaeI	CATG	1 cut(s)	243
FaiI	YATR	3 cut(s)	116, 125, 241
FalI	AAGNNNNNCTT	2 cut(s)	94, 126
FaqI	GGGAC	1 cut(s)	150
FatI	CATG	1 cut(s)	239
FauI	CCCGC	1 cut(s)	127
FokI	GGATG	1 cut(s)	165
GlaI	GCGC	1 cut(s)	211
HhaI	GCGC	1 cut(s)	212
Hin1II	CATG	1 cut(s)	243
Hin6I	GCGC	1 cut(s)	210
HinP1I	GCGC	1 cut(s)	210
HincII	GTYRAC	1 cut(s)	13
HindII	GTYRAC	1 cut(s)	13
HinfI	GANTC	1 cut(s)	230
HphI	GGTGA	1 cut(s)	57
Hpy166II	GTNNAC	1 cut(s)	13
Hpy188I	TCNGA	1 cut(s)	235
Hpy188III	TCNNGA	1 cut(s)	183
Hpy8I	GTNNAC	1 cut(s)	13
HpyAV	CCTTC	1 cut(s)	209
HpyCH4III	ACNGT	1 cut(s)	247
HpyCH4V	TGCA	1 cut(s)	114
HpyF3I	CTNAG	1 cut(s)	78
Hsp92II	CATG	1 cut(s)	243
HspAI	GCGC	1 cut(s)	210
LmnI	GCTCC	1 cut(s)	107
LpnPI	CCDG	3 cut(s)	58, 85, 239
LweI	GCATC	1 cut(s)	197
MabI	ACCWGGT	1 cut(s)	71
MboII	GAAGA	3 cut(s)	97, 114, 239
MlyI	GAGTC	1 cut(s)	224
MnlI	CCTC	6 cut(s)	73, 98, 143, 179, 190, 212
MroXI	GAANNNNTTC	1 cut(s)	89
MseI	TTAA	2 cut(s)	249, 258
MspR9I	CCNGG	1 cut(s)	73
MvaI	CCWGG	1 cut(s)	73
NlaIII	CATG	1 cut(s)	243
PdmI	GAANNNNTTC	1 cut(s)	89
PflFI	GACNNNGTC	1 cut(s)	73
PleI	GAGTC	1 cut(s)	224
PpsI	GAGTC	1 cut(s)	224
Psp6I	CCWGG	1 cut(s)	71
PspGI	CCWGG	1 cut(s)	71
PsyI	GACNNNGTC	1 cut(s)	73
SaqAI	TTAA	2 cut(s)	249, 258
SchI	GAGTC	1 cut(s)	224
ScrFI	CCNGG	1 cut(s)	73
SetI	ASST	5 cut(s)	12, 60, 74, 112, 265
SexAI	ACCWGGT	1 cut(s)	71
SfaNI	GCATC	1 cut(s)	197
SmlI	CTYRAG	1 cut(s)	183
SmoI	CTYRAG	1 cut(s)	183
SsiI	CCGC	1 cut(s)	134
StyD4I	CCNGG	1 cut(s)	71
TaaI	ACNGT	1 cut(s)	247
Tru1I	TTAA	2 cut(s)	249, 258
Tru9I	TTAA	2 cut(s)	249, 258
TspDTI	ATGAA	1 cut(s)	169
Tth111I	GACNNNGTC	1 cut(s)	73
XmnI	GAANNNNTTC	1 cut(s)	89

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.