U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0027839.1_g000001 |
| rosa_samantha | Rh2AG358400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 106 |
| AcsI | RAATTY | 1 cut(s) | 243 |
| AfaI | GTAC | 1 cut(s) | 369 |
| AgsI | TTSAA | 1 cut(s) | 243 |
| AluBI | AGCT | 4 cut(s) | 47, 184, 320, 347 |
| AluI | AGCT | 4 cut(s) | 47, 184, 320, 347 |
| Alw21I | GWGCWC | 2 cut(s) | 49, 349 |
| AlwI | GGATC | 1 cut(s) | 106 |
| Ama87I | CYCGRG | 1 cut(s) | 200 |
| ApoI | RAATTY | 1 cut(s) | 243 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 24, 54, 56, 86 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 23 |
| AsuHPI | GGTGA | 1 cut(s) | 241 |
| AvaI | CYCGRG | 1 cut(s) | 200 |
| BanII | GRGCYC | 2 cut(s) | 49, 349 |
| BbsI | GAAGAC | 2 cut(s) | 26, 92 |
| Bbv12I | GWGCWC | 2 cut(s) | 49, 349 |
| BccI | CCATC | 2 cut(s) | 23, 260 |
| BciVI | GTATCC | 1 cut(s) | 118 |
| BfaI | CTAG | 2 cut(s) | 13, 342 |
| BfuI | GTATCC | 1 cut(s) | 118 |
| BmeT110I | CYCGRG | 1 cut(s) | 200 |
| BpiI | GAAGAC | 2 cut(s) | 26, 92 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 131, 163 |
| Bpu10I | CCTNAGC | 1 cut(s) | 336 |
| BpuEI | CTTGAG | 2 cut(s) | 333, 342 |
| BseGI | GGATG | 2 cut(s) | 192, 252 |
| BseMII | CTCAG | 3 cut(s) | 178, 271, 350 |
| BseRI | GAGGAG | 1 cut(s) | 344 |
| BsiHKAI | GWGCWC | 2 cut(s) | 49, 349 |
| BsiHKCI | CYCGRG | 1 cut(s) | 200 |
| BsoBI | CYCGRG | 1 cut(s) | 200 |
| Bsp1286I | GDGCHC | 2 cut(s) | 49, 349 |
| Bsp1407I | TGTACA | 1 cut(s) | 367 |
| Bsp143I | GATC | 2 cut(s) | 36, 98 |
| BspCNI | CTCAG | 3 cut(s) | 177, 270, 349 |
| BspPI | GGATC | 1 cut(s) | 106 |
| BsrGI | TGTACA | 1 cut(s) | 367 |
| BssMI | GATC | 2 cut(s) | 36, 98 |
| BstAUI | TGTACA | 1 cut(s) | 367 |
| BstC8I | GCNNGC | 2 cut(s) | 210, 380 |
| BstDEI | CTNAG | 3 cut(s) | 164, 257, 336 |
| BstF5I | GGATG | 2 cut(s) | 192, 252 |
| BstKTI | GATC | 2 cut(s) | 39, 101 |
| BstMBI | GATC | 2 cut(s) | 36, 98 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 396 |
| BstNSI | RCATGY | 1 cut(s) | 107 |
| BstV2I | GAAGAC | 2 cut(s) | 26, 92 |
| BsuI | GTATCC | 1 cut(s) | 118 |
| BtsCI | GGATG | 2 cut(s) | 192, 252 |
| BtsIMutI | CAGTG | 1 cut(s) | 390 |
| Cac8I | GCNNGC | 2 cut(s) | 210, 380 |
| Csp6I | GTAC | 1 cut(s) | 368 |
| CviAII | CATG | 1 cut(s) | 104 |
| CviJI | RGCY | 7 cut(s) | 47, 163, 184, 320, 335, 341, 347 |
| CviKI_1 | RGCY | 7 cut(s) | 47, 163, 184, 320, 335, 341, 347 |
| CviQI | GTAC | 1 cut(s) | 368 |
| DdeI | CTNAG | 3 cut(s) | 164, 257, 336 |
| DpnI | GATC | 2 cut(s) | 38, 100 |
| DpnII | GATC | 2 cut(s) | 36, 98 |
| Ecl136II | GAGCTC | 2 cut(s) | 47, 347 |
| Eco24I | GRGCYC | 2 cut(s) | 49, 349 |
| Eco53kI | GAGCTC | 2 cut(s) | 47, 347 |
| Eco88I | CYCGRG | 1 cut(s) | 200 |
| EcoICRI | GAGCTC | 2 cut(s) | 47, 347 |
| EcoT38I | GRGCYC | 2 cut(s) | 49, 349 |
| FaeI | CATG | 1 cut(s) | 107 |
| FaiI | YATR | 7 cut(s) | 66, 105, 121, 129, 219, 406, 413 |
| FatI | CATG | 1 cut(s) | 103 |
| FokI | GGATG | 2 cut(s) | 179, 239 |
| FriOI | GRGCYC | 2 cut(s) | 49, 349 |
| FspBI | CTAG | 2 cut(s) | 13, 342 |
| Hin1II | CATG | 1 cut(s) | 107 |
| HinfI | GANTC | 1 cut(s) | 132 |
| HphI | GGTGA | 1 cut(s) | 241 |
| Hpy188I | TCNGA | 1 cut(s) | 167 |
| Hpy188III | TCNNGA | 1 cut(s) | 148 |
| Hpy99I | CGWCG | 1 cut(s) | 154 |
| HpyAV | CCTTC | 2 cut(s) | 34, 121 |
| HpyCH4IV | ACGT | 1 cut(s) | 152 |
| HpyCH4V | TGCA | 1 cut(s) | 382 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 396 |
| HpyF3I | CTNAG | 3 cut(s) | 164, 257, 336 |
| HpySE526I | ACGT | 1 cut(s) | 152 |
| Hsp92II | CATG | 1 cut(s) | 107 |
| Kzo9I | GATC | 2 cut(s) | 36, 98 |
| LmnI | GCTCC | 2 cut(s) | 52, 317 |
| LpnPI | CCDG | 3 cut(s) | 67, 121, 323 |
| MaeI | CTAG | 2 cut(s) | 13, 342 |
| MaeII | ACGT | 1 cut(s) | 152 |
| MaeIII | GTNAC | 2 cut(s) | 60, 283 |
| MalI | GATC | 2 cut(s) | 38, 100 |
| MboI | GATC | 2 cut(s) | 36, 98 |
| MboII | GAAGA | 3 cut(s) | 31, 97, 321 |
| MhlI | GDGCHC | 2 cut(s) | 49, 349 |
| MluCI | AATT | 2 cut(s) | 243, 302 |
| MmeI | TCCRAC | 1 cut(s) | 220 |
| MnlI | CCTC | 5 cut(s) | 9, 133, 266, 322, 325 |
| MroXI | GAANNNNTTC | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 396 |
| NdeII | GATC | 2 cut(s) | 36, 98 |
| NlaIII | CATG | 1 cut(s) | 107 |
| NmuCI | GTSAC | 2 cut(s) | 60, 283 |
| NspI | RCATGY | 1 cut(s) | 107 |
| PdmI | GAANNNNTTC | 1 cut(s) | 23 |
| PfeI | GAWTC | 1 cut(s) | 132 |
| Psp124BI | GAGCTC | 2 cut(s) | 49, 349 |
| RsaI | GTAC | 1 cut(s) | 369 |
| RsaNI | GTAC | 1 cut(s) | 368 |
| SacI | GAGCTC | 2 cut(s) | 49, 349 |
| Sau3AI | GATC | 2 cut(s) | 36, 98 |
| SduI | GDGCHC | 2 cut(s) | 49, 349 |
| SetI | ASST | 7 cut(s) | 26, 49, 155, 186, 322, 349, 412 |
| SmlI | CTYRAG | 2 cut(s) | 321, 348 |
| SmoI | CTYRAG | 2 cut(s) | 321, 348 |
| Sse9I | AATT | 2 cut(s) | 243, 302 |
| SspMI | CTAG | 2 cut(s) | 13, 342 |
| SstI | GAGCTC | 2 cut(s) | 49, 349 |
| TaiI | ACGT | 1 cut(s) | 155 |
| TaqI | TCGA | 2 cut(s) | 27, 149 |
| TasI | AATT | 2 cut(s) | 243, 302 |
| TatI | WGTACW | 1 cut(s) | 367 |
| TfiI | GAWTC | 1 cut(s) | 132 |
| TscAI | CASTG | 1 cut(s) | 397 |
| TseFI | GTSAC | 2 cut(s) | 60, 283 |
| Tsp45I | GTSAC | 2 cut(s) | 60, 283 |
| TspGWI | ACGGA | 1 cut(s) | 186 |
| TspRI | CASTG | 1 cut(s) | 397 |
| XapI | RAATTY | 1 cut(s) | 243 |
| XceI | RCATGY | 1 cut(s) | 107 |
| XmnI | GAANNNNTTC | 1 cut(s) | 23 |
| XspI | CTAG | 2 cut(s) | 13, 342 |