Rmu_sc0038259.1_g000003

Beta-glucosidase 13-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0038259.1
Physical Location & Seq
Reverse (-)
13625 .. 16150
2526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0038259.1_g000003.1.cds

Sequence Viewer

Length: 1476 bp
atggctctcagtctaagcttttcgttgccagcgtcggcaacaagagcaccggtcagctccttcaggagactaccgagccgtactccaacggtgaaagccgtaggagtgttcccatctaagagaattgattataagagggccattagaattagaccatgctctgcattgggagatcttacttcagcattaacaagtgcagttactgatactgccgccgctgttgttgacgctgcgaccacgattgttgataccgtgactgcggttgctgataccacaaccacaactgcaaccacagaagtaaccagggctgatttccctactgaattcaagtttggttgcgccacttccgctttccagacagaaggatctggaactgaaggagggagaggaccagccacgtgggatacttacatacaagataacgcactagatggcacagaaatagccgttgattcctacaaccgctacaaggacgacgtgcaactgctgaagaacatgggagtggatacatacagattctctatttcctggtcaagaatcctacctgatggaacccttgacaatataaaccaggctggtatcgatttctacaacaacttcatcgacgaactggtagcaaatgggataagtccatttgtgacactgttccacttcgacttgcccacagctctgaatactaagtacaacggcttcttaagcattgacattgtggaggatttcaaagcatatgctgatttatgtttcaaaacttttggcgatcgagtgaagtactgggctactatcaatgagccacaagtgtgggggcaatacggcttcactaaccccgccgcagatgcaaatgctgccaccgatccttttgtctctgcgcataacgtcatattagcccatgctgcagcagccaaactctacaagactacataccagccaacacaaggaggagtgatcggaatcccgtcagtggttgaatggtttgagccatacgaagacaccgcgcaagatagagatgcggcccgtagagcatttgactttaagacaggatggtttgtggagcccctagtatatggtgattacccatttatcatgagagctttggtgggggatgcacttccagaattcacagatgagcagaaagagttggtaaagggctcatatgattacattggggtgaactactacactgccagattcacgatttctgtaccaataacaagcgatgatgtctacgatgcgatggatgattacaagcacgctaccgagtcaaaggtaggaccagatggggagtacataggcgatgcgacaccagggagcaccgagatcttcgtctatccagatgggctaaggaagggattgattttaatgaaggaactttacaacaatcccaaaatcgtcaactatatagaggagattggttcagatatatcataccagtgtctcatagaacaaccttgcactttctttcttggtttttccttctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

491

Amino Acids

54.11

Weight (kDa)

4.54

Isoelectric Point (pI)

27.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 132
Acc16I TGCGCA 1 cut(s) 867
AccI GTMKAC 1 cut(s) 1221
AccII CGCG 1 cut(s) 992
AciI CCGC 9 cut(s) 213, 216, 260, 348, 463, 825, 828, 990, 1007
AclWI GGATC 2 cut(s) 373, 845
AcsI RAATTY 2 cut(s) 323, 1112
AcuI CTGAAG 4 cut(s) 46, 165, 396, 509
AcvI CACGTG 1 cut(s) 399
AfaI GTAC 5 cut(s) 82, 683, 770, 1200, 1283
AfiI CCNNNNNNNGG 3 cut(s) 469, 932, 958
AflII CTTAAG 1 cut(s) 694
AgeI ACCGGT 1 cut(s) 49
AgsI TTSAA 4 cut(s) 328, 721, 745, 965
AjiI CACGTC 1 cut(s) 478
AjnI CCWGG 4 cut(s) 302, 527, 570, 1300
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AleI CACNNNNGTG 1 cut(s) 796
AluBI AGCT 4 cut(s) 18, 57, 668, 1088
AluI AGCT 4 cut(s) 18, 57, 668, 1088
Alw21I GWGCWC 2 cut(s) 49, 1310
Alw26I GTCTC 3 cut(s) 61, 865, 1436
AlwI GGATC 2 cut(s) 373, 845
AlwNI CAGNNNCTG 1 cut(s) 203
AoxI GGCC 2 cut(s) 138, 1008
ApeKI GCWGC 5 cut(s) 230, 842, 890, 893, 896
ApoI RAATTY 2 cut(s) 323, 1112
AsiGI ACCGGT 1 cut(s) 49
AspLEI GCGC 3 cut(s) 341, 868, 994
AspS9I GGNCC 4 cut(s) 138, 389, 1009, 1268
AsuHPI GGTGA 3 cut(s) 103, 1076, 1177
AvaII GGWCC 2 cut(s) 389, 1268
BanII GRGCYC 2 cut(s) 1053, 1148
BarI GAAGNNNNNNTAC 4 cut(s) 674, 706, 1352, 1384
BbrPI CACGTG 1 cut(s) 399
BbsI GAAGAC 1 cut(s) 990
Bbv12I GWGCWC 2 cut(s) 49, 1310
BbvI GCAGC 5 cut(s) 217, 829, 877, 905, 908
BccI CCATC 7 cut(s) 121, 425, 542, 1032, 1225, 1268, 1325
BceAI ACGGC 5 cut(s) 63, 83, 431, 703, 826
BciT130I CCWGG 4 cut(s) 304, 529, 572, 1302
BciVI GTATCC 2 cut(s) 397, 499
BcoDI GTCTC 3 cut(s) 61, 865, 1436
BfaI CTAG 2 cut(s) 428, 1055
BfmI CTRYAG 1 cut(s) 891
BfrI CTTAAG 1 cut(s) 694
BfuI GTATCC 2 cut(s) 397, 499
BglII AGATCT 2 cut(s) 172, 1314
BisI GCNGC 9 cut(s) 213, 216, 231, 828, 843, 891, 894, 897, 1008
BlsI GCNGC 9 cut(s) 214, 217, 232, 829, 844, 892, 895, 898, 1009
BmcAI AGTACT 1 cut(s) 770
Bme1390I CCNGG 4 cut(s) 304, 529, 572, 1302
Bme18I GGWCC 2 cut(s) 389, 1268
BmgBI CACGTC 1 cut(s) 478
BmgT120I GGNCC 4 cut(s) 138, 389, 1009, 1268
BmiI GGNNCC 2 cut(s) 553, 1050
BmrFI CCNGG 4 cut(s) 304, 529, 572, 1302
BmrI ACTGGG 1 cut(s) 781
BmsI GCATC 5 cut(s) 823, 994, 1090, 1216, 1282
BmuI ACTGGG 1 cut(s) 781
BpiI GAAGAC 1 cut(s) 990
BplI GAGNNNNNCTC 2 cut(s) 67, 99
Bpu10I CCTNAGC 1 cut(s) 1337
Bsa29I ATCGAT 1 cut(s) 582
BsaAI YACGTR 1 cut(s) 399
BsaBI GATNNNNATC 1 cut(s) 947
BsaJI CCNNGG 2 cut(s) 303, 1301
BsaWI WCCGGW 1 cut(s) 49
Bsc4I CCNNNNNNNGG 3 cut(s) 469, 932, 958
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 3 cut(s) 615, 776, 1426
Bse8I GATNNNNATC 1 cut(s) 947
BseBI CCWGG 4 cut(s) 304, 529, 572, 1302
BseCI ATCGAT 1 cut(s) 582
BseDI CCNNGG 2 cut(s) 303, 1301
BseGI GGATG 3 cut(s) 1043, 1105, 1240
BseJI GATNNNNATC 1 cut(s) 947
BseLI CCNNNNNNNGG 3 cut(s) 469, 932, 958
BseMII CTCAG 1 cut(s) 22
BseNI ACTGG 3 cut(s) 615, 776, 1426
BseRI GAGGAG 2 cut(s) 951, 1415
BseXI GCAGC 5 cut(s) 217, 829, 877, 905, 908
BsgI GTGCAG 1 cut(s) 216
Bsh1236I CGCG 1 cut(s) 992
Bsh1285I CGRYCG 1 cut(s) 760
BshFI GGCC 2 cut(s) 140, 1010
BshTI ACCGGT 1 cut(s) 49
BshVI ATCGAT 1 cut(s) 582
BsiEI CGRYCG 1 cut(s) 760
BsiHKAI GWGCWC 2 cut(s) 49, 1310
BsiSI CCGG 1 cut(s) 50
BslI CCNNNNNNNGG 3 cut(s) 469, 932, 958
BsmAI GTCTC 3 cut(s) 61, 865, 1436
BsnI GGCC 2 cut(s) 140, 1010
Bsp1286I GDGCHC 4 cut(s) 49, 1053, 1148, 1310
Bsp143I GATC 6 cut(s) 172, 365, 757, 850, 942, 1314
BspACI CCGC 9 cut(s) 213, 216, 260, 348, 463, 825, 828, 990, 1007
BspANI GGCC 2 cut(s) 140, 1010
BspCNI CTCAG 1 cut(s) 21
BspDI ATCGAT 1 cut(s) 582
BspFNI CGCG 1 cut(s) 992
BspHI TCATGA 1 cut(s) 1080
BspLI GGNNCC 2 cut(s) 553, 1050
BspMAI CTGCAG 1 cut(s) 895
BspPI GGATC 2 cut(s) 373, 845
BspTI CTTAAG 1 cut(s) 694
BsrFI RCCGGY 1 cut(s) 49
BsrI ACTGG 3 cut(s) 615, 776, 1426
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 2 cut(s) 303, 1301
BssMI GATC 6 cut(s) 172, 365, 757, 850, 942, 1314
Bst2UI CCWGG 4 cut(s) 304, 529, 572, 1302
Bst4CI ACNGT 3 cut(s) 91, 253, 645
BstAFI CTTAAG 1 cut(s) 694
BstAPI GCANNNNNTGC 1 cut(s) 842
BstBAI YACGTR 1 cut(s) 399
BstC8I GCNNGC 2 cut(s) 30, 1248
BstDEI CTNAG 5 cut(s) 8, 14, 117, 678, 1337
BstF5I GGATG 3 cut(s) 1043, 1105, 1240
BstFNI CGCG 1 cut(s) 992
BstHHI GCGC 3 cut(s) 341, 868, 994
BstKTI GATC 6 cut(s) 175, 368, 760, 853, 945, 1317
BstMAI GTCTC 3 cut(s) 61, 865, 1436
BstMBI GATC 6 cut(s) 172, 365, 757, 850, 942, 1314
BstMCI CGRYCG 1 cut(s) 760
BstMWI GCNNNNNNNGC 8 cut(s) 44, 347, 696, 833, 842, 890, 896, 1016
BstNI CCWGG 4 cut(s) 304, 529, 572, 1302
BstSCI CCNGG 4 cut(s) 302, 527, 570, 1300
BstSFI CTRYAG 1 cut(s) 891
BstUI CGCG 1 cut(s) 992
BstV1I GCAGC 5 cut(s) 217, 829, 877, 905, 908
BstV2I GAAGAC 1 cut(s) 990
BstX2I RGATCY 3 cut(s) 172, 365, 1314
BstXI CCANNNNNNTGG 2 cut(s) 399, 798
BstYI RGATCY 3 cut(s) 172, 365, 1314
Bsu15I ATCGAT 1 cut(s) 582
BsuI GTATCC 2 cut(s) 397, 499
BsuRI GGCC 2 cut(s) 140, 1010
BsuTUI ATCGAT 1 cut(s) 582
BtgZI GCGATG 3 cut(s) 1227, 1244, 1305
BtrI CACGTC 1 cut(s) 478
BtsCI GGATG 3 cut(s) 1043, 1105, 1240
BtsI GCAGTG 1 cut(s) 1176
BtsIMutI CAGTG 4 cut(s) 641, 963, 1176, 1433
Cac8I GCNNGC 2 cut(s) 30, 1248
CaiI CAGNNNCTG 1 cut(s) 203
CciI TCATGA 1 cut(s) 1080
CfoI GCGC 3 cut(s) 341, 868, 994
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 4 cut(s) 138, 389, 1009, 1268
ClaI ATCGAT 1 cut(s) 582
CseI GACGC 2 cut(s) 21, 236
Csp6I GTAC 5 cut(s) 81, 682, 769, 1199, 1282
CspAI ACCGGT 1 cut(s) 49
CspCI CAANNNNNGTGG 2 cut(s) 226, 261
CviAII CATG 4 cut(s) 156, 496, 887, 1081
CviQI GTAC 5 cut(s) 81, 682, 769, 1199, 1282
DdeI CTNAG 5 cut(s) 8, 14, 117, 678, 1337
DpnI GATC 6 cut(s) 174, 367, 759, 852, 944, 1316
DpnII GATC 6 cut(s) 172, 365, 757, 850, 942, 1314
Eco24I GRGCYC 2 cut(s) 1053, 1148
Eco47I GGWCC 2 cut(s) 389, 1268
Eco57I CTGAAG 4 cut(s) 46, 165, 396, 509
Eco72I CACGTG 1 cut(s) 399
EcoRI GAATTC 2 cut(s) 323, 1112
EcoRII CCWGG 4 cut(s) 302, 527, 570, 1300
EcoT38I GRGCYC 2 cut(s) 1053, 1148
FaeI CATG 4 cut(s) 159, 499, 890, 1084
FatI CATG 4 cut(s) 155, 495, 886, 1080
FauI CCCGC 1 cut(s) 832
FauNDI CATATG 2 cut(s) 727, 1150
FblI GTMKAC 1 cut(s) 1221
Fnu4HI GCNGC 9 cut(s) 213, 216, 231, 828, 843, 891, 894, 897, 1008
FokI GGATG 3 cut(s) 1050, 1112, 1247
FriOI GRGCYC 2 cut(s) 1053, 1148
Fsp4HI GCNGC 9 cut(s) 213, 216, 231, 828, 843, 891, 894, 897, 1008
FspBI CTAG 2 cut(s) 428, 1055
FspI TGCGCA 1 cut(s) 867
GlaI GCGC 3 cut(s) 340, 867, 993
GluI GCNGC 9 cut(s) 213, 216, 231, 828, 843, 891, 894, 897, 1008
HaeIII GGCC 2 cut(s) 140, 1010
HapII CCGG 1 cut(s) 50
HgaI GACGC 2 cut(s) 21, 236
HhaI GCGC 3 cut(s) 341, 868, 994
Hin1II CATG 4 cut(s) 159, 499, 890, 1084
Hin6I GCGC 3 cut(s) 339, 866, 992
HinP1I GCGC 3 cut(s) 339, 866, 992
HincII GTYRAC 2 cut(s) 226, 1390
HindII GTYRAC 2 cut(s) 226, 1390
HindIII AAGCTT 1 cut(s) 16
HinfI GANTC 6 cut(s) 452, 516, 537, 948, 1185, 1256
HpaII CCGG 1 cut(s) 50
HphI GGTGA 3 cut(s) 103, 1076, 1177
Hpy166II GTNNAC 4 cut(s) 226, 1168, 1222, 1390
Hpy188I TCNGA 4 cut(s) 672, 947, 1414, 1475
Hpy188III TCNNGA 8 cut(s) 64, 355, 369, 534, 1081, 1109, 1189, 1328
Hpy8I GTNNAC 4 cut(s) 226, 1168, 1222, 1390
Hpy99I CGWCG 3 cut(s) 37, 479, 608
HpyAV CCTTC 5 cut(s) 70, 356, 371, 1336, 1354
HpyCH4III ACNGT 3 cut(s) 91, 253, 645
HpyCH4IV ACGT 3 cut(s) 398, 477, 873
HpyCH4V TGCA 8 cut(s) 164, 197, 287, 481, 836, 893, 1103, 1449
HpyF10VI GCNNNNNNNGC 8 cut(s) 44, 347, 696, 833, 842, 890, 896, 1016
HpyF3I CTNAG 5 cut(s) 8, 14, 117, 678, 1337
HpySE526I ACGT 3 cut(s) 398, 477, 873
Hsp92II CATG 4 cut(s) 159, 499, 890, 1084
HspAI GCGC 3 cut(s) 339, 866, 992
Kzo9I GATC 6 cut(s) 172, 365, 757, 850, 942, 1314
LmnI GCTCC 3 cut(s) 62, 1048, 1305
Lsp1109I GCAGC 5 cut(s) 217, 829, 877, 905, 908
LweI GCATC 5 cut(s) 823, 994, 1090, 1216, 1282
MaeI CTAG 2 cut(s) 428, 1055
MaeII ACGT 3 cut(s) 398, 477, 873
MaeIII GTNAC 4 cut(s) 199, 253, 298, 637
MalI GATC 6 cut(s) 174, 367, 759, 852, 944, 1316
MboI GATC 6 cut(s) 172, 365, 757, 850, 942, 1314
MboII GAAGA 3 cut(s) 502, 995, 1309
MflI RGATCY 3 cut(s) 172, 365, 1314
MhlI GDGCHC 4 cut(s) 49, 1053, 1148, 1310
MluCI AATT 4 cut(s) 123, 147, 323, 1112
MlyI GAGTC 1 cut(s) 1265
MmeI TCCRAC 1 cut(s) 110
MnlI CCTC 6 cut(s) 129, 374, 380, 706, 929, 1393
MseI TTAA 4 cut(s) 188, 695, 1029, 1355
MslI CAYNNNNRTG 4 cut(s) 500, 796, 1163, 1426
MspA1I CMGCKG 1 cut(s) 218
MspCI CTTAAG 1 cut(s) 694
MspI CCGG 1 cut(s) 50
MspR9I CCNGG 4 cut(s) 304, 529, 572, 1302
MvaI CCWGG 4 cut(s) 304, 529, 572, 1302
MvnI CGCG 1 cut(s) 992
MwoI GCNNNNNNNGC 8 cut(s) 44, 347, 696, 833, 842, 890, 896, 1016
NdeI CATATG 2 cut(s) 727, 1150
NdeII GATC 6 cut(s) 172, 365, 757, 850, 942, 1314
NlaIII CATG 4 cut(s) 159, 499, 890, 1084
NlaIV GGNNCC 2 cut(s) 553, 1050
NmuCI GTSAC 2 cut(s) 253, 637
NsbI TGCGCA 1 cut(s) 867
OliI CACNNNNGTG 1 cut(s) 796
PagI TCATGA 1 cut(s) 1080
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PfeI GAWTC 5 cut(s) 452, 516, 537, 948, 1185
PinAI ACCGGT 1 cut(s) 49
PkrI GCNGC 9 cut(s) 214, 217, 232, 829, 844, 892, 895, 898, 1009
Ple19I CGATCG 1 cut(s) 760
PleI GAGTC 1 cut(s) 1264
PmaCI CACGTG 1 cut(s) 399
PmlI CACGTG 1 cut(s) 399
PpsI GAGTC 1 cut(s) 1264
Ppu21I YACGTR 1 cut(s) 399
PsiI TTATAA 1 cut(s) 132
Psp6I CCWGG 4 cut(s) 302, 527, 570, 1300
PspCI CACGTG 1 cut(s) 399
PspGI CCWGG 4 cut(s) 302, 527, 570, 1300
PspN4I GGNNCC 2 cut(s) 553, 1050
PspPI GGNCC 4 cut(s) 138, 389, 1009, 1268
PstI CTGCAG 1 cut(s) 895
PstNI CAGNNNCTG 1 cut(s) 203
PsuI RGATCY 3 cut(s) 172, 365, 1314
PvuI CGATCG 1 cut(s) 760
RsaI GTAC 5 cut(s) 82, 683, 770, 1200, 1283
RsaNI GTAC 5 cut(s) 81, 682, 769, 1199, 1282
RseI CAYNNNNRTG 4 cut(s) 500, 796, 1163, 1426
SaqAI TTAA 4 cut(s) 188, 695, 1029, 1355
SatI GCNGC 9 cut(s) 213, 216, 231, 828, 843, 891, 894, 897, 1008
Sau3AI GATC 6 cut(s) 172, 365, 757, 850, 942, 1314
Sau96I GGNCC 4 cut(s) 138, 389, 1009, 1268
ScaI AGTACT 1 cut(s) 770
SchI GAGTC 1 cut(s) 1265
ScrFI CCNGG 4 cut(s) 304, 529, 572, 1302
SduI GDGCHC 4 cut(s) 49, 1053, 1148, 1310
SfaNI GCATC 5 cut(s) 823, 994, 1090, 1216, 1282
SfcI CTRYAG 1 cut(s) 891
SinI GGWCC 2 cut(s) 389, 1268
SmiMI CAYNNNNRTG 4 cut(s) 500, 796, 1163, 1426
SmlI CTYRAG 1 cut(s) 694
SmoI CTYRAG 1 cut(s) 694
Sse9I AATT 4 cut(s) 123, 147, 323, 1112
SsiI CCGC 9 cut(s) 213, 216, 260, 348, 463, 825, 828, 990, 1007
SspMI CTAG 2 cut(s) 428, 1055
StyD4I CCNGG 4 cut(s) 302, 527, 570, 1300
TaaI ACNGT 3 cut(s) 91, 253, 645
TaiI ACGT 3 cut(s) 401, 480, 876
TaqI TCGA 4 cut(s) 582, 603, 654, 760
TasI AATT 4 cut(s) 123, 147, 323, 1112
TatI WGTACW 3 cut(s) 681, 768, 1281
TauI GCSGC 4 cut(s) 215, 218, 830, 1010
TfiI GAWTC 5 cut(s) 452, 516, 537, 948, 1185
Tru1I TTAA 4 cut(s) 188, 695, 1029, 1355
Tru9I TTAA 4 cut(s) 188, 695, 1029, 1355
TscAI CASTG 4 cut(s) 648, 963, 1183, 1433
TseFI GTSAC 2 cut(s) 253, 637
TseI GCWGC 5 cut(s) 230, 842, 890, 893, 896
Tsp45I GTSAC 2 cut(s) 253, 637
TspDTI ATGAA 2 cut(s) 589, 1373
TspRI CASTG 4 cut(s) 648, 963, 1183, 1433
Vha464I CTTAAG 1 cut(s) 694
VpaK11BI GGWCC 2 cut(s) 389, 1268
XapI RAATTY 2 cut(s) 323, 1112
XmiI GTMKAC 1 cut(s) 1221
XspI CTAG 2 cut(s) 428, 1055
ZrmI AGTACT 1 cut(s) 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.