NPH3 family
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.4G012200_v2.0.a1 Prupe.4G012200_v2.0.a1 |
| rosa_multiflora | Rmu_sc0028881.1_g000001 Rmu_sc0040974.1_g000001 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 148 |
| AciI | CCGC | 4 cut(s) | 109, 143, 148, 356 |
| AcsI | RAATTY | 2 cut(s) | 14, 196 |
| AfaI | GTAC | 2 cut(s) | 5, 64 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 355 |
| AgsI | TTSAA | 3 cut(s) | 195, 229, 327 |
| AhlI | ACTAGT | 1 cut(s) | 308 |
| AluBI | AGCT | 4 cut(s) | 60, 133, 179, 452 |
| AluI | AGCT | 4 cut(s) | 60, 133, 179, 452 |
| ApeKI | GCWGC | 2 cut(s) | 57, 179 |
| ApoI | RAATTY | 2 cut(s) | 14, 196 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 379 |
| AspLEI | GCGC | 2 cut(s) | 103, 148 |
| AxyI | CCTNAGG | 2 cut(s) | 213, 432 |
| BbvCI | CCTCAGC | 1 cut(s) | 299 |
| BbvI | GCAGC | 2 cut(s) | 69, 166 |
| BcuI | ACTAGT | 1 cut(s) | 308 |
| BfaI | CTAG | 2 cut(s) | 134, 309 |
| BisI | GCNGC | 3 cut(s) | 58, 144, 180 |
| BlsI | GCNGC | 3 cut(s) | 59, 145, 181 |
| BmsI | GCATC | 4 cut(s) | 31, 88, 326, 343 |
| Bpu10I | CCTNAGC | 1 cut(s) | 299 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 355 |
| Bse1I | ACTGG | 1 cut(s) | 291 |
| Bse21I | CCTNAGG | 2 cut(s) | 213, 432 |
| Bse3DI | GCAATG | 1 cut(s) | 25 |
| BseGI | GGATG | 2 cut(s) | 81, 223 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 355 |
| BseMI | GCAATG | 1 cut(s) | 25 |
| BseMII | CTCAG | 3 cut(s) | 204, 290, 423 |
| BseNI | ACTGG | 1 cut(s) | 291 |
| BseRI | GAGGAG | 1 cut(s) | 351 |
| BseXI | GCAGC | 2 cut(s) | 69, 166 |
| Bsh1236I | CGCG | 1 cut(s) | 148 |
| BsiSI | CCGG | 1 cut(s) | 31 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 355 |
| Bsp1407I | TGTACA | 2 cut(s) | 3, 62 |
| BspACI | CCGC | 4 cut(s) | 109, 143, 148, 356 |
| BspCNI | CTCAG | 3 cut(s) | 205, 291, 424 |
| BspFNI | CGCG | 1 cut(s) | 148 |
| BsrDI | GCAATG | 1 cut(s) | 25 |
| BsrGI | TGTACA | 2 cut(s) | 3, 62 |
| BsrI | ACTGG | 1 cut(s) | 291 |
| BstAUI | TGTACA | 2 cut(s) | 3, 62 |
| BstC8I | GCNNGC | 1 cut(s) | 450 |
| BstDEI | CTNAG | 4 cut(s) | 213, 299, 371, 432 |
| BstF5I | GGATG | 2 cut(s) | 81, 223 |
| BstFNI | CGCG | 1 cut(s) | 148 |
| BstHHI | GCGC | 2 cut(s) | 103, 148 |
| BstUI | CGCG | 1 cut(s) | 148 |
| BstV1I | GCAGC | 2 cut(s) | 69, 166 |
| Bsu36I | CCTNAGG | 2 cut(s) | 213, 432 |
| BtgZI | GCGATG | 1 cut(s) | 111 |
| BtsCI | GGATG | 2 cut(s) | 81, 223 |
| Cac8I | GCNNGC | 1 cut(s) | 450 |
| CfoI | GCGC | 2 cut(s) | 103, 148 |
| CseI | GACGC | 1 cut(s) | 431 |
| Csp6I | GTAC | 2 cut(s) | 4, 63 |
| CviAII | CATG | 2 cut(s) | 321, 350 |
| CviJI | RGCY | 7 cut(s) | 60, 121, 133, 179, 211, 348, 452 |
| CviKI_1 | RGCY | 7 cut(s) | 60, 121, 133, 179, 211, 348, 452 |
| CviQI | GTAC | 2 cut(s) | 4, 63 |
| DdeI | CTNAG | 4 cut(s) | 213, 299, 371, 432 |
| Eco81I | CCTNAGG | 2 cut(s) | 213, 432 |
| FaeI | CATG | 2 cut(s) | 324, 353 |
| FaiI | YATR | 5 cut(s) | 115, 162, 296, 322, 351 |
| FatI | CATG | 2 cut(s) | 320, 349 |
| Fnu4HI | GCNGC | 3 cut(s) | 58, 144, 180 |
| FokI | GGATG | 2 cut(s) | 88, 230 |
| Fsp4HI | GCNGC | 3 cut(s) | 58, 144, 180 |
| FspBI | CTAG | 2 cut(s) | 134, 309 |
| GlaI | GCGC | 2 cut(s) | 102, 147 |
| GluI | GCNGC | 3 cut(s) | 58, 144, 180 |
| HapII | CCGG | 1 cut(s) | 31 |
| HgaI | GACGC | 1 cut(s) | 431 |
| HhaI | GCGC | 2 cut(s) | 103, 148 |
| Hin1II | CATG | 2 cut(s) | 324, 353 |
| Hin6I | GCGC | 2 cut(s) | 101, 146 |
| HinP1I | GCGC | 2 cut(s) | 101, 146 |
| HincII | GTYRAC | 1 cut(s) | 274 |
| HindII | GTYRAC | 1 cut(s) | 274 |
| HindIII | AAGCTT | 1 cut(s) | 450 |
| HinfI | GANTC | 3 cut(s) | 257, 341, 419 |
| HpaI | GTTAAC | 1 cut(s) | 274 |
| HpaII | CCGG | 1 cut(s) | 31 |
| Hpy166II | GTNNAC | 2 cut(s) | 65, 274 |
| Hpy188III | TCNNGA | 3 cut(s) | 154, 261, 431 |
| Hpy8I | GTNNAC | 2 cut(s) | 65, 274 |
| HpyAV | CCTTC | 2 cut(s) | 242, 247 |
| HpyCH4V | TGCA | 1 cut(s) | 317 |
| HpyF3I | CTNAG | 4 cut(s) | 213, 299, 371, 432 |
| Hsp92II | CATG | 2 cut(s) | 324, 353 |
| HspAI | GCGC | 2 cut(s) | 101, 146 |
| KspAI | GTTAAC | 1 cut(s) | 274 |
| LpnPI | CCDG | 8 cut(s) | 44, 117, 225, 245, 246, 304, 358, 444 |
| Lsp1109I | GCAGC | 2 cut(s) | 69, 166 |
| LweI | GCATC | 4 cut(s) | 31, 88, 326, 343 |
| MaeI | CTAG | 2 cut(s) | 134, 309 |
| MaeIII | GTNAC | 1 cut(s) | 424 |
| MboII | GAAGA | 1 cut(s) | 149 |
| MluCI | AATT | 4 cut(s) | 14, 196, 401, 437 |
| MnlI | CCTC | 8 cut(s) | 27, 66, 179, 208, 262, 294, 329, 427 |
| MroXI | GAANNNNTTC | 1 cut(s) | 379 |
| MseI | TTAA | 1 cut(s) | 273 |
| MspA1I | CMGCKG | 1 cut(s) | 60 |
| MspI | CCGG | 1 cut(s) | 31 |
| MvnI | CGCG | 1 cut(s) | 148 |
| NlaIII | CATG | 2 cut(s) | 324, 353 |
| PdmI | GAANNNNTTC | 1 cut(s) | 379 |
| PfeI | GAWTC | 3 cut(s) | 257, 341, 419 |
| PkrI | GCNGC | 3 cut(s) | 59, 145, 181 |
| PvuII | CAGCTG | 1 cut(s) | 60 |
| RsaI | GTAC | 2 cut(s) | 5, 64 |
| RsaNI | GTAC | 2 cut(s) | 4, 63 |
| SaqAI | TTAA | 1 cut(s) | 273 |
| SatI | GCNGC | 3 cut(s) | 58, 144, 180 |
| SetI | ASST | 6 cut(s) | 38, 62, 135, 181, 273, 454 |
| SfaNI | GCATC | 4 cut(s) | 31, 88, 326, 343 |
| SpeI | ACTAGT | 1 cut(s) | 308 |
| Sse9I | AATT | 4 cut(s) | 14, 196, 401, 437 |
| SsiI | CCGC | 4 cut(s) | 109, 143, 148, 356 |
| SspMI | CTAG | 2 cut(s) | 134, 309 |
| TaqI | TCGA | 2 cut(s) | 153, 334 |
| TasI | AATT | 4 cut(s) | 14, 196, 401, 437 |
| TatI | WGTACW | 2 cut(s) | 3, 62 |
| TauI | GCSGC | 1 cut(s) | 146 |
| TfiI | GAWTC | 3 cut(s) | 257, 341, 419 |
| Tru1I | TTAA | 1 cut(s) | 273 |
| Tru9I | TTAA | 1 cut(s) | 273 |
| TseI | GCWGC | 2 cut(s) | 57, 179 |
| TspDTI | ATGAA | 1 cut(s) | 261 |
| XapI | RAATTY | 2 cut(s) | 14, 196 |
| XmnI | GAANNNNTTC | 1 cut(s) | 379 |
| XspI | CTAG | 2 cut(s) | 134, 309 |