Rmu_ssc0000160.1_g000019

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000160.1
OG0023022
Physical Location & Seq
Forward (+)
86729 .. 91443
4715 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2934 bp
atgctgtacttcaccgccgcattgaccgccggtcaactatcactctccgagatccaagccttaaccaccttcaagctcaacctccacgacccgctcggcgccctcaacggctgggactcctccacgccatccgccccatgcgactggcgcggcgtcgtttgcttcaacaaccgagtccgggaactcagcctgcctcgcctccacctcgcgggtcaactcggcgaccaactcgccagcctccgtgacctccgcaagctcaacctccacaccaacaacttcaacggctccattcctccctccctctcccaatgcgccttgctacgcaccgtttacttgcacggcaactcactttccggcgacctcccgccggcacttctcaacctcaccaacctccaaatcctcaaccttgctcacaactccctctccggcagaatctccggctacattccggccagcctccgataccttgatctttcctccaatgcattcaccggggacattccggtgaacttctccgccaactcgcagctccagctcgtcaatttttccttcaatcagttcaccggcggcgttccgccgaccatcggacggctccagatgcttgagtctctctggctggactcgaaccagctgaccggcacgcttccttcggctatttccaactgctcctccctcatacatttcagcgccgacgacaacgcgctccgaggactaattccggcgactatcggcgccattccgaagcttgaggtggtttctttagctcggaacagcttatcaggctcagtcccgatagctttattgtgcaatgggaatgttgactcttcttcactgaggatagtagatctagggttcaatgcgctcacgggaattgtgcagccgcaaaatggaaggtgttcgagtattctggaggtcctggttcttaaaagcaatcgcattggcggcgcgttcccaaattggttgagtaatgtgactacgctgagggttttcgatgttgctggaaactcgttttcggggggattgccggccgaaatcggcaatcttttccggttggaagaactccgggtgggtaataattccctgagcggtgaaattcctactgagattgcaaaatgcagtttgttacaggatcttgatcttgaagggaaccgctttgagggccagtttccgttgtttctgggaggaatgaggagcttaaaggtgttgtccttgggtgggaatttaatctcgggtaccatcccgtcgagtttgggagcactgtcggggctagaatccttgaacctgagcggtaataatctgacaggggaagttccagttgagctcatgcagctaagcaacttgactagcctgaacctgagtaataacaagttttccggtgaggttcttgggaatgtaggagcattgaggagcttgcagggtttgaatttgagcaattgtgggctttcaggtagcgtccccgcgagtgttggaagtttgatgaggctcgctacactggatttgagtaaacaaaagctctctggtgagttgcctactgagatttttgggctgccaaatttacaagtggttgctttgcaagagaatcagttgtctggggctgtccctcaaggttttagtagcttgactggtttagtgtacctaaatctctcctccaatgcctttactggtgttattccagccacgtatgggtatctacggtcactaaccgttctatctttgtcaaagaatcgcatttccggtgtgatcccaccagagcttggagattgtttgaaccttcaagtacttgagcttagttctaatcaattgggggacaaaattccagttgatatctctcggctatctagtttggaagagctggatttaggtcataacaaattgacaggtgaaataccagaggaaatttccaaatgctctgctctgacttcattattgttagaggaaaatcaactttcagggccaataccaaactccttgcctttgttagtgaaccttgtggtgttagatctttcctcaaaccagttgagtggagcaatcccggcaaatatttcactcattcctcacttgaagtccttgaatttgtctaacaacaacctatctggtaagattccagagctactgggttctcaattcaatggttctgtctttgcaatgaacccgaaattatgtgggaaaccattggacagagaatgtggagatgcgaaaaggagaaggagaaacaggttgcttttattaattggggtggctgctggtggagctttgcttctgttaatgtgttgttgtggctatgtctacagcctcttccgctggcgtaagaagcttagagaaatggtaactggggagaagaagggtcccagtccaggtcgtgcaagctcaggcggagagagatctggtcgtggaagtggagacaatggagggccaaagctagttatgttcaatactaagattacatatgcagaagcattagaagcaacaagacaatttgatgaggaaaatgtgttaagcaggggaaagtacggactggtattcaaggcttcattcccagatggaatggtgctctcaattcgacgccttcctgcttcttctcttggtgtgctcgatgaagagacgttccacaaagaagccgaagctcttggcaaggtgaagcatcggaatttaacagttctgcgaggctactatgccggtcctgatagcaactcacattcatttctgagtcacgaagatgacaagagcagcatcactatggtacaattcaactgcccacgacatgtcgttctcagttctcaccttcgctctggcggccctactctactggcctctgattccaacatggcattgagttgggggctgacacccggtcgttatggtagctcatcagtaattacacacagacacacagcatgtgtcaatttaaatatttcacctgccaatctgccgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0016020 GO:0032501 GO:0032502 GO:0044464 GO:0048731 GO:0048856 GO:0071944 GO:0090696 GO:0099402
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

977

Amino Acids

104.19

Weight (kDa)

8.05

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 16 - 54 7e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 321 - 454 1.4e-10 Leucine-rich repeat region
LRR_8 PF13855 375 - 433 5.8e-08 Leucine rich repeat
LRR_8 PF13855 397 - 457 5.6e-09 Leucine rich repeat
LRR_14 PF23598 471 - 596 2.2e-10 Leucine-rich repeat region
LRR_8 PF13855 494 - 552 4.8e-08 Leucine rich repeat
LRR_4 PF12799 566 - 603 7.8e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 610 - 649 5.2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0023022)

Species Orthologous Gene IDs
rosa_multiflora Rmu_co8009648.1_g000001 Rmu_sc0035143.1_g000001 Rmu_sc0035144.1_g000001 Rmu_ssc0000160.1_g000019

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2926
Acc36I ACCTGC 1 cut(s) 2926
Acc65I GGTACC 1 cut(s) 1232
AccB1I GGYRCC 3 cut(s) 98, 731, 1232
AccB7I CCANNNNNTGG 1 cut(s) 1754
AccBSI CCGCTC 3 cut(s) 94, 1086, 1287
AccI GTMKAC 1 cut(s) 2286
AccII CGCG 5 cut(s) 150, 209, 701, 947, 1460
AclWI GGATC 3 cut(s) 46, 1137, 1735
AcoI YGGCCR 2 cut(s) 450, 1026
AcsI RAATTY 8 cut(s) 1092, 1219, 1423, 1552, 1812, 1896, 2071, 2647
AcyI GRCGYC 4 cut(s) 99, 153, 732, 2563
AfaI GTAC 6 cut(s) 8, 1234, 1634, 1779, 2510, 2742
AflIII ACRYGT 1 cut(s) 2761
AhdI GACNNNNNGTC 2 cut(s) 30, 2850
AjnI CCWGG 2 cut(s) 915, 2353
Alw21I GWGCWC 4 cut(s) 1258, 1323, 2553, 2592
Alw26I GTCTC 3 cut(s) 612, 2394, 2594
AlwI GGATC 3 cut(s) 46, 1137, 1735
Ama87I CYCGRG 1 cut(s) 1228
AoxI GGCC 7 cut(s) 450, 1026, 1159, 1952, 2411, 2794, 2808
ApeKI GCWGC 6 cut(s) 526, 877, 1327, 1546, 2240, 2727
ApoI RAATTY 8 cut(s) 1092, 1219, 1423, 1552, 1812, 1896, 2071, 2647
AseI ATTAAT 1 cut(s) 2228
Asp700I GAANNNNTTC 1 cut(s) 895
Asp718I GGTACC 1 cut(s) 1232
AspLEI GCGC 8 cut(s) 101, 150, 314, 689, 703, 734, 862, 947
AspS9I GGNCC 7 cut(s) 913, 1159, 1952, 2345, 2411, 2678, 2795
AsuC2I CCSGG 5 cut(s) 179, 493, 1064, 2033, 2850
AvaI CYCGRG 1 cut(s) 1228
AvaII GGWCC 3 cut(s) 913, 2345, 2678
BanI GGYRCC 3 cut(s) 98, 731, 1232
BanII GRGCYC 1 cut(s) 1323
Bbv12I GWGCWC 4 cut(s) 1258, 1323, 2553, 2592
BbvCI CCTCAGC 1 cut(s) 980
BbvI GCAGC 6 cut(s) 538, 889, 1339, 1533, 2227, 2739
BccI CCATC 4 cut(s) 136, 590, 1244, 2534
BceAI ACGGC 5 cut(s) 124, 298, 355, 605, 2914
BciT130I CCWGG 2 cut(s) 917, 2355
BcnI CCSGG 5 cut(s) 179, 493, 1064, 2033, 2850
BcoDI GTCTC 3 cut(s) 612, 2394, 2594
BfaI CTAG 5 cut(s) 848, 1268, 1344, 1839, 2420
BfmI CTRYAG 1 cut(s) 2287
BfoI RGCGCY 3 cut(s) 102, 690, 735
BfuAI ACCTGC 1 cut(s) 2926
BglII AGATCT 3 cut(s) 844, 1999, 2381
BlpI GCTNAGC 1 cut(s) 1331
BmcAI AGTACT 1 cut(s) 1779
Bme1390I CCNGG 7 cut(s) 179, 493, 917, 1064, 2033, 2355, 2850
Bme18I GGWCC 3 cut(s) 913, 2345, 2678
BmeRI GACNNNNNGTC 2 cut(s) 30, 2850
BmeT110I CYCGRG 1 cut(s) 1228
BmgT120I GGNCC 7 cut(s) 913, 1159, 1952, 2345, 2411, 2678, 2795
BmiI GGNNCC 8 cut(s) 100, 286, 593, 733, 1148, 1234, 2346, 2347
BmrFI CCNGG 7 cut(s) 179, 493, 917, 1064, 2033, 2355, 2850
BmrI ACTGGG 3 cut(s) 2123, 2340, 2343
BmsI GCATC 4 cut(s) 588, 2182, 2650, 2739
BmuI ACTGGG 3 cut(s) 2123, 2340, 2343
BpmI CTGGAG 3 cut(s) 515, 578, 929
Bpu10I CCTNAGC 4 cut(s) 980, 1082, 1283, 2368
Bpu1102I GCTNAGC 1 cut(s) 1331
BpuEI CTTGAG 4 cut(s) 623, 767, 1587, 1802
BpuMI CCSGG 5 cut(s) 179, 493, 1064, 2033, 2850
BsaAI YACGTR 1 cut(s) 1680
BsaBI GATNNNNATC 1 cut(s) 1134
BsaHI GRCGYC 4 cut(s) 99, 153, 732, 2563
BsaJI CCNNGG 3 cut(s) 492, 706, 1209
BsaWI WCCGGW 4 cut(s) 502, 1047, 1373, 1733
BsaXI ACNNNNNCTCC 4 cut(s) 407, 437, 653, 683
Bse118I RCCGGY 6 cut(s) 29, 367, 563, 635, 1024, 2675
Bse3DI GCAATG 2 cut(s) 814, 2151
Bse8I GATNNNNATC 1 cut(s) 1134
BseBI CCWGG 2 cut(s) 917, 2355
BseDI CCNNGG 3 cut(s) 492, 706, 1209
BseGI GGATG 2 cut(s) 128, 1236
BseJI GATNNNNATC 1 cut(s) 1134
BseMI GCAATG 2 cut(s) 814, 2151
BseRI GAGGAG 5 cut(s) 109, 658, 1204, 1420, 1636
BseX3I CGGCCG 1 cut(s) 1026
BseXI GCAGC 6 cut(s) 538, 889, 1339, 1533, 2227, 2739
BseYI CCCAGC 1 cut(s) 111
BsgI GTGCAG 1 cut(s) 896
Bsh1236I CGCG 5 cut(s) 150, 209, 701, 947, 1460
Bsh1285I CGRYCG 2 cut(s) 1029, 2854
BshFI GGCC 7 cut(s) 452, 1028, 1161, 1954, 2413, 2796, 2810
BshNI GGYRCC 3 cut(s) 98, 731, 1232
BsiEI CGRYCG 2 cut(s) 1029, 2854
BsiHKAI GWGCWC 4 cut(s) 1258, 1323, 2553, 2592
BsiHKCI CYCGRG 1 cut(s) 1228
BslFI GGGAC 7 cut(s) 128, 509, 773, 1439, 1583, 1820, 2331
BsmAI GTCTC 3 cut(s) 612, 2394, 2594
BsmBI CGTCTC 1 cut(s) 2594
BsmFI GGGAC 7 cut(s) 128, 509, 773, 1439, 1583, 1820, 2331
BsmI GAATGC 1 cut(s) 485
BsnI GGCC 7 cut(s) 452, 1028, 1161, 1954, 2413, 2796, 2810
BsoBI CYCGRG 1 cut(s) 1228
Bsp1286I GDGCHC 4 cut(s) 1258, 1323, 2553, 2592
Bsp143I GATC 8 cut(s) 51, 469, 844, 1129, 1135, 1740, 1999, 2381
Bsp1720I GCTNAGC 1 cut(s) 1331
BspANI GGCC 7 cut(s) 452, 1028, 1161, 1954, 2413, 2796, 2810
BspFNI CGCG 5 cut(s) 150, 209, 701, 947, 1460
BspLI GGNNCC 8 cut(s) 100, 286, 593, 733, 1148, 1234, 2346, 2347
BspMI ACCTGC 1 cut(s) 2926
BspPI GGATC 3 cut(s) 46, 1137, 1735
BspQI GCTCTTC 1 cut(s) 1842
BspT107I GGYRCC 3 cut(s) 98, 731, 1232
BsrBI CCGCTC 3 cut(s) 94, 1086, 1287
BsrDI GCAATG 2 cut(s) 814, 2151
BsrFI RCCGGY 6 cut(s) 29, 367, 563, 635, 1024, 2675
BssAI RCCGGY 6 cut(s) 29, 367, 563, 635, 1024, 2675
BssECI CCNNGG 3 cut(s) 492, 706, 1209
BssMI GATC 8 cut(s) 51, 469, 844, 1129, 1135, 1740, 1999, 2381
BssNI GRCGYC 4 cut(s) 99, 153, 732, 2563
BssT1I CCWWGG 1 cut(s) 1209
Bst2UI CCWGG 2 cut(s) 917, 2355
Bst4CI ACNGT 5 cut(s) 328, 1260, 1695, 1705, 2656
Bst6I CTCTTC 4 cut(s) 829, 1842, 2300, 2592
BstACI GRCGYC 4 cut(s) 99, 153, 732, 2563
BstBAI YACGTR 1 cut(s) 1680
BstF5I GGATG 2 cut(s) 128, 1236
BstFNI CGCG 5 cut(s) 150, 209, 701, 947, 1460
BstH2I RGCGCY 3 cut(s) 102, 690, 735
BstHHI GCGC 8 cut(s) 101, 150, 314, 689, 703, 734, 862, 947
BstKTI GATC 8 cut(s) 54, 472, 847, 1132, 1138, 1743, 2002, 2384
BstMAI GTCTC 3 cut(s) 612, 2394, 2594
BstMBI GATC 8 cut(s) 51, 469, 844, 1129, 1135, 1740, 1999, 2381
BstMCI CGRYCG 2 cut(s) 1029, 2854
BstNI CCWGG 2 cut(s) 917, 2355
BstNSI RCATGY 2 cut(s) 2765, 2898
BstSCI CCNGG 7 cut(s) 177, 491, 915, 1062, 2031, 2353, 2848
BstSFI CTRYAG 1 cut(s) 2287
BstUI CGCG 5 cut(s) 150, 209, 701, 947, 1460
BstV1I GCAGC 6 cut(s) 538, 889, 1339, 1533, 2227, 2739
BstX2I RGATCY 5 cut(s) 51, 844, 1129, 1999, 2381
BstXI CCANNNNNNTGG 2 cut(s) 144, 2021
BstYI RGATCY 5 cut(s) 51, 844, 1129, 1999, 2381
BstZI CGGCCG 1 cut(s) 1026
BsuRI GGCC 7 cut(s) 452, 1028, 1161, 1954, 2413, 2796, 2810
BtsCI GGATG 2 cut(s) 128, 1236
BtsIMutI CAGTG 3 cut(s) 830, 1256, 1490
BveI ACCTGC 1 cut(s) 2926
CfoI GCGC 8 cut(s) 101, 150, 314, 689, 703, 734, 862, 947
Cfr10I RCCGGY 6 cut(s) 29, 367, 563, 635, 1024, 2675
Cfr13I GGNCC 7 cut(s) 913, 1159, 1952, 2345, 2411, 2678, 2795
CseI GACGC 3 cut(s) 142, 1441, 2571
Csp6I GTAC 6 cut(s) 7, 1233, 1633, 1778, 2509, 2741
CviAII CATG 5 cut(s) 138, 1324, 2762, 2824, 2895
CviQI GTAC 6 cut(s) 7, 1233, 1633, 1778, 2509, 2741
DinI GGCGCC 2 cut(s) 100, 733
DpnI GATC 8 cut(s) 53, 471, 846, 1131, 1137, 1742, 2001, 2383
DpnII GATC 8 cut(s) 51, 469, 844, 1129, 1135, 1740, 1999, 2381
DraI TTTAAA 1 cut(s) 2907
DriI GACNNNNNGTC 2 cut(s) 30, 2850
EaeI YGGCCR 2 cut(s) 450, 1026
EagI CGGCCG 1 cut(s) 1026
Eam1104I CTCTTC 4 cut(s) 829, 1842, 2300, 2592
Eam1105I GACNNNNNGTC 2 cut(s) 30, 2850
EarI CTCTTC 4 cut(s) 829, 1842, 2300, 2592
EciI GGCGGA 4 cut(s) 121, 505, 564, 2388
Ecl136II GAGCTC 1 cut(s) 1321
EclXI CGGCCG 1 cut(s) 1026
Eco130I CCWWGG 1 cut(s) 1209
Eco24I GRGCYC 1 cut(s) 1323
Eco32I GATATC 1 cut(s) 1825
Eco47I GGWCC 3 cut(s) 913, 2345, 2678
Eco52I CGGCCG 1 cut(s) 1026
Eco53kI GAGCTC 1 cut(s) 1321
Eco88I CYCGRG 1 cut(s) 1228
EcoICRI GAGCTC 1 cut(s) 1321
EcoO109I RGGNCCY 2 cut(s) 913, 2345
EcoRII CCWGG 2 cut(s) 915, 2353
EcoRV GATATC 1 cut(s) 1825
EcoT14I CCWWGG 1 cut(s) 1209
EcoT22I ATGCAT 1 cut(s) 487
EcoT38I GRGCYC 1 cut(s) 1323
EgeI GGCGCC 2 cut(s) 100, 733
EheI GGCGCC 2 cut(s) 100, 733
ErhI CCWWGG 1 cut(s) 1209
Esp3I CGTCTC 1 cut(s) 2594
FaeI CATG 5 cut(s) 141, 1327, 2765, 2827, 2898
FaqI GGGAC 7 cut(s) 128, 509, 773, 1439, 1583, 1820, 2331
FatI CATG 5 cut(s) 137, 1323, 2761, 2823, 2894
FauI CCCGC 4 cut(s) 99, 202, 372, 1465
FauNDI CATATG 1 cut(s) 2446
FblI GTMKAC 1 cut(s) 2286
FokI GGATG 2 cut(s) 115, 1223
FriOI GRGCYC 1 cut(s) 1323
FspBI CTAG 5 cut(s) 848, 1268, 1344, 1839, 2420
GlaI GCGC 8 cut(s) 100, 149, 313, 688, 702, 733, 861, 946
GsaI CCCAGC 1 cut(s) 115
GsuI CTGGAG 3 cut(s) 515, 578, 929
HaeII RGCGCY 3 cut(s) 102, 690, 735
HaeIII GGCC 7 cut(s) 452, 1028, 1161, 1954, 2413, 2796, 2810
HgaI GACGC 3 cut(s) 142, 1441, 2571
HhaI GCGC 8 cut(s) 101, 150, 314, 689, 703, 734, 862, 947
Hin1I GRCGYC 4 cut(s) 99, 153, 732, 2563
Hin1II CATG 5 cut(s) 141, 1327, 2765, 2827, 2898
Hin6I GCGC 8 cut(s) 99, 148, 312, 687, 701, 732, 860, 945
HinP1I GCGC 8 cut(s) 99, 148, 312, 687, 701, 732, 860, 945
HincII GTYRAC 3 cut(s) 35, 215, 820
HindII GTYRAC 3 cut(s) 35, 215, 820
HindIII AAGCTT 2 cut(s) 743, 2312
Hpy188III TCNNGA 8 cut(s) 595, 790, 908, 1133, 1139, 2105, 2681, 2711
Hpy99I CGWCG 4 cut(s) 158, 695, 1246, 2565
HpyCH4III ACNGT 5 cut(s) 328, 1260, 1695, 1705, 2656
HpyCH4IV ACGT 2 cut(s) 1679, 2603
HpySE526I ACGT 2 cut(s) 1679, 2603
Hsp92I GRCGYC 4 cut(s) 99, 153, 732, 2563
Hsp92II CATG 5 cut(s) 141, 1327, 2765, 2827, 2898
HspAI GCGC 8 cut(s) 99, 148, 312, 687, 701, 732, 860, 945
KasI GGCGCC 2 cut(s) 98, 731
KflI GGGWCCC 1 cut(s) 2345
KpnI GGTACC 1 cut(s) 1236
KroI GCCGGC 2 cut(s) 367, 1024
KroNI GCCGGC 2 cut(s) 369, 1026
Kzo9I GATC 8 cut(s) 51, 469, 844, 1129, 1135, 1740, 1999, 2381
LguI GCTCTTC 1 cut(s) 1842
Lsp1109I GCAGC 6 cut(s) 538, 889, 1339, 1533, 2227, 2739
LweI GCATC 4 cut(s) 588, 2182, 2650, 2739
MaeI CTAG 5 cut(s) 848, 1268, 1344, 1839, 2420
MaeII ACGT 2 cut(s) 1679, 2603
MaeIII GTNAC 6 cut(s) 242, 970, 1122, 1695, 2326, 2708
MalI GATC 8 cut(s) 53, 471, 846, 1131, 1137, 1742, 2001, 2383
MbiI CCGCTC 3 cut(s) 94, 1086, 1287
MboI GATC 8 cut(s) 51, 469, 844, 1129, 1135, 1740, 1999, 2381
MboII GAAGA 9 cut(s) 816, 819, 1067, 1859, 2287, 2350, 2568, 2609, 2726
MfeI CAATTG 2 cut(s) 1432, 1799
MflI RGATCY 5 cut(s) 51, 844, 1129, 1999, 2381
MhlI GDGCHC 4 cut(s) 1258, 1323, 2553, 2592
Mly113I GGCGCC 2 cut(s) 99, 732
MlyI GAGTC 6 cut(s) 110, 183, 614, 614, 815, 2716
MmeI TCCRAC 4 cut(s) 684, 1032, 1447, 2844
Mph1103I ATGCAT 1 cut(s) 487
MroNI GCCGGC 2 cut(s) 367, 1024
MroXI GAANNNNTTC 1 cut(s) 895
MseI TTAA 9 cut(s) 62, 924, 1196, 1223, 2228, 2264, 2495, 2651, 2906
MslI CAYNNNNRTG 3 cut(s) 503, 2715, 2735
MspA1I CMGCKG 2 cut(s) 631, 2301
MspR9I CCNGG 7 cut(s) 179, 493, 917, 1064, 2033, 2355, 2850
MunI CAATTG 2 cut(s) 1432, 1799
Mva1269I GAATGC 1 cut(s) 485
MvaI CCWGG 2 cut(s) 917, 2355
MvnI CGCG 5 cut(s) 150, 209, 701, 947, 1460
NaeI GCCGGC 2 cut(s) 369, 1026
NarI GGCGCC 2 cut(s) 99, 732
NciI CCSGG 5 cut(s) 179, 493, 1064, 2033, 2850
NdeI CATATG 1 cut(s) 2446
NdeII GATC 8 cut(s) 51, 469, 844, 1129, 1135, 1740, 1999, 2381
NgoMIV GCCGGC 2 cut(s) 367, 1024
NlaIII CATG 5 cut(s) 141, 1327, 2765, 2827, 2898
NlaIV GGNNCC 8 cut(s) 100, 286, 593, 733, 1148, 1234, 2346, 2347
NmeAIII GCCGAG 3 cut(s) 75, 198, 1810
NmuCI GTSAC 4 cut(s) 242, 970, 1695, 2708
NsiI ATGCAT 1 cut(s) 487
NspI RCATGY 2 cut(s) 2765, 2898
PaqCI CACCTGC 1 cut(s) 2926
PciI ACATGT 1 cut(s) 2761
PciSI GCTCTTC 1 cut(s) 1842
PctI GAATGC 1 cut(s) 485
PdiI GCCGGC 2 cut(s) 369, 1026
PdmI GAANNNNTTC 1 cut(s) 895
PfeI GAWTC 6 cut(s) 432, 1271, 1579, 1723, 2101, 2816
PflMI CCANNNNNTGG 1 cut(s) 1754
PfoI TCCNGGA 1 cut(s) 177
PleI GAGTC 6 cut(s) 110, 182, 613, 614, 815, 2715
PluTI GGCGCC 2 cut(s) 102, 735
PpsI GAGTC 6 cut(s) 110, 182, 613, 614, 815, 2715
Ppu21I YACGTR 1 cut(s) 1680
PpuMI RGGWCCY 2 cut(s) 913, 2345
PscI ACATGT 1 cut(s) 2761
PshBI ATTAAT 1 cut(s) 2228
Psp124BI GAGCTC 1 cut(s) 1323
Psp5II RGGWCCY 2 cut(s) 913, 2345
Psp6I CCWGG 2 cut(s) 915, 2353
PspFI CCCAGC 1 cut(s) 111
PspGI CCWGG 2 cut(s) 915, 2353
PspN4I GGNNCC 8 cut(s) 100, 286, 593, 733, 1148, 1234, 2346, 2347
PspPI GGNCC 7 cut(s) 913, 1159, 1952, 2345, 2411, 2678, 2795
PspPPI RGGWCCY 2 cut(s) 913, 2345
PsuI RGATCY 5 cut(s) 51, 844, 1129, 1999, 2381
PvuII CAGCTG 1 cut(s) 631
RsaI GTAC 6 cut(s) 8, 1234, 1634, 1779, 2510, 2742
RsaNI GTAC 6 cut(s) 7, 1233, 1633, 1778, 2509, 2741
RseI CAYNNNNRTG 3 cut(s) 503, 2715, 2735
SacI GAGCTC 1 cut(s) 1323
SapI GCTCTTC 1 cut(s) 1842
SaqAI TTAA 9 cut(s) 62, 924, 1196, 1223, 2228, 2264, 2495, 2651, 2906
Sau3AI GATC 8 cut(s) 51, 469, 844, 1129, 1135, 1740, 1999, 2381
Sau96I GGNCC 7 cut(s) 913, 1159, 1952, 2345, 2411, 2678, 2795
ScaI AGTACT 1 cut(s) 1779
SchI GAGTC 6 cut(s) 110, 183, 614, 614, 815, 2716
ScrFI CCNGG 7 cut(s) 179, 493, 917, 1064, 2033, 2355, 2850
SduI GDGCHC 4 cut(s) 1258, 1323, 2553, 2592
SfaNI GCATC 4 cut(s) 588, 2182, 2650, 2739
SfcI CTRYAG 1 cut(s) 2287
SfoI GGCGCC 2 cut(s) 100, 733
SgrAI CRCCGGYG 1 cut(s) 563
SinI GGWCC 3 cut(s) 913, 2345, 2678
SmiI ATTTAAAT 1 cut(s) 2907
SmiMI CAYNNNNRTG 3 cut(s) 503, 2715, 2735
SmlI CTYRAG 4 cut(s) 602, 746, 1602, 1781
SmoI CTYRAG 4 cut(s) 602, 746, 1602, 1781
SspDI GGCGCC 2 cut(s) 98, 731
SspI AATATT 2 cut(s) 2041, 2911
SspMI CTAG 5 cut(s) 848, 1268, 1344, 1839, 2420
SstI GAGCTC 1 cut(s) 1323
StyD4I CCNGG 7 cut(s) 177, 491, 915, 1062, 2031, 2353, 2848
StyI CCWWGG 1 cut(s) 1209
SwaI ATTTAAAT 1 cut(s) 2907
TaaI ACNGT 5 cut(s) 328, 1260, 1695, 1705, 2656
TaiI ACGT 2 cut(s) 1682, 2606
TaqI TCGA 6 cut(s) 623, 899, 990, 1244, 2560, 2592
TatI WGTACW 2 cut(s) 6, 1777
TauI GCSGC 6 cut(s) 20, 153, 570, 883, 945, 2796
TfiI GAWTC 6 cut(s) 432, 1271, 1579, 1723, 2101, 2816
Tru1I TTAA 9 cut(s) 62, 924, 1196, 1223, 2228, 2264, 2495, 2651, 2906
Tru9I TTAA 9 cut(s) 62, 924, 1196, 1223, 2228, 2264, 2495, 2651, 2906
TscAI CASTG 3 cut(s) 837, 1263, 1497
TseFI GTSAC 4 cut(s) 242, 970, 1695, 2708
TseI GCWGC 6 cut(s) 526, 877, 1327, 1546, 2240, 2727
Tsp45I GTSAC 4 cut(s) 242, 970, 1695, 2708
TspDTI ATGAA 5 cut(s) 1911, 2162, 2520, 2610, 2688
TspGWI ACGGA 3 cut(s) 230, 1158, 2526
TspRI CASTG 3 cut(s) 837, 1263, 1497
Van91I CCANNNNNTGG 1 cut(s) 1754
VpaK11BI GGWCC 3 cut(s) 913, 2345, 2678
VspI ATTAAT 1 cut(s) 2228
XapI RAATTY 8 cut(s) 1092, 1219, 1423, 1552, 1812, 1896, 2071, 2647
XceI RCATGY 2 cut(s) 2765, 2898
XmiI GTMKAC 1 cut(s) 2286
XmnI GAANNNNTTC 1 cut(s) 895
XspI CTAG 5 cut(s) 848, 1268, 1344, 1839, 2420
ZrmI AGTACT 1 cut(s) 1779
Zsp2I ATGCAT 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.