Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000304.1

Orthogroup ID

OG0012037

Physical Location & Seq

Genomic Coordinates Forward (+)

10879 .. 14231

Gene Structure 3353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

atgggttcgattcgttttctcatttctctgtttcttgcgctcggggtttttacccctccaccgcgagtttgtggaaatgcagagctcggagcactgctgcagctgaaggcctctcttgacccagaaggcaagtacttgagttcatggactgaacatggcgatccgtgtagtggaacatttgaaggtgtggcgtgtaatgagaagagcaaagtggctaatgtttctttgcaggggaagggtctttcgggtcggctttcgccggcggtggccgagctccggtgcttgtccggtctgtacttgcattataataacttggcaggggagattccgaaggagattggagctctaactgggcttactgatctgtatctcaatgtgaataatctctctgggggtataccccaagagattgggaaaatggctagtcttcaagttttacagctatgttgcaaccagctgaatgggagcatacctacacagatggggtccttgaagaggttaagtgttcttgctttgcagtataacagaatatatggtcagattcctgcaagcttgggggacttagggttgctcaaaaggcttgatctgggcttcaataatttctctggtacaattcctgcaaagctagctagtataccatctttggaactcttagatatccgaaataattctctttctggagtggtctctcctgctttcaagagattaaatgaaggatttgagtctgcaaacaacccagaactatgcggagttggattttctacactgagaacttgcacatcttttgacacggacagagtggatgtcgatggactaccagttggaccaaacttaaatggaacagtgggtactgctcctccaaaagccaaccctgagtcggtagatgtcaacacccattgcaaccaaaacaattgcaaaaagtcgaccagatttccgcaagctgctgtaattgcaggagttattgcactcattgtcacattggctgggggtgtatttctggctcttgtgcggaacagacgaaagaaacaaaagattgggaatactagtgatccttctgatggccagcttagcactgatcaggccaaggagttctacaggagaagtccctctccactagtgagtcttgagtactctaatgcatgggatcccttggccgatgggcaaaatggccttggtttctctttctcccaggagtatctcaaaagctattggttcaacatggaagatgtggagtctgcaacacaatacttctccgaggtgaacctgttagggaagagcaaattctcttctgtctacaaaggagttctgagagatggttctcttgtagctgttaagagcattaatgtgaccagctgcaagtctgaggaagctgaatttgtgaagggactgcacttagtattttcgctaactcatgaaaaccttgtcaagttgaaaggtttctgctgctctaggggcagaggtgaatgcttccttatctatgattttgctcctaatggaaacctctctcaatatctcgatgtaatcgatggaaagaaccaagtccttgactggtccaagagagtttctatcttaaagggcattgcaaaaggtattggatacttgcacggcagtgaagaaaacaaaccggccatgattcatcaaaacatctctgttgaaaagacaagtgctgcaatgggatacctagctcctgaatatatcaccactggtcgtttcactgagaaaagtgatgtatatgcatttggagtcattgtcctccaagttatatcagggaatctacaactcaacacttcaatgcgactggctgcagaatcatgcagatatgaagaatttgttgacaccaatctaaaagggcaattcgcagaacctgaagcagctgcactgggaaaactcggactagtgtgcactcatgagcatcctgaccaaaggccaacaatgcagacagtgatccaggagctgagcaaccttacagcgagttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

658

Amino Acids

71.13

Weight (kDa)

6.77

Isoelectric Point (pI)

30.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	26 - 66	3.3e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	84 - 172	2.7e-08	Leucine-rich repeat region
LRR_8	PF13855	118 - 177	9.5e-06	Leucine rich repeat
LRR_8	PF13855	166 - 225	7e-06	Leucine rich repeat
Pkinase	PF00069	418 - 537	1.2e-11	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	421 - 549	2.5e-16	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	551 - 650	4.2e-07	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	552 - 652	2.4e-09	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22730 AT4G22730
fragaria_vesca	FvH4_5g00660 FvH4_5g00660 FvH4_5g00660 FvH4_5g00660
malus_domestica	MD04G1079600.v1.1
prunus_persica	Prupe.5G079400_v2.0.a1
pyrus_communis	pycom04g07170
rosa_chinensis	RchiOBHm_Chr7g0201601
rosa_laevigata	RLG00000003662
rosa_multiflora	Rmu_ssc0000304.1_g000002
rosa_roxburghii	Rroxscaffold_3G00255210
rosa_rugosa	Rorug07G0065100
rosa_samantha	Rh7AG191600 Rh7BG193900 Rh7CG203000 Rh7DG196900
rosa_wichuraiana	Rw7G016800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	306
AccI	GTMKAC	4 cut(s)	397, 634, 923, 1293
AccII	CGCG	1 cut(s)	64
AciI	CCGC	5 cut(s)	62, 263, 747, 935, 1009
AclWI	GGATC	5 cut(s)	155, 1043, 1139, 1152, 1939
AcoI	YGGCCR	4 cut(s)	267, 1060, 1152, 1626
AcsI	RAATTY	3 cut(s)	1280, 1373, 1826
AcuI	CTGAAG	2 cut(s)	125, 1887
AfaI	GTAC	5 cut(s)	134, 296, 610, 850, 1130
AfiI	CCNNNNNNNGG	5 cut(s)	170, 276, 495, 877, 1058
AgsI	TTSAA	9 cut(s)	182, 431, 493, 595, 700, 1216, 1432, 1655, 1791
AhlI	ACTAGT	3 cut(s)	1043, 1114, 1894
AjnI	CCWGG	2 cut(s)	1188, 1947
AleI	CACNNNNGTG	1 cut(s)	1608
Alw21I	GWGCWC	5 cut(s)	87, 94, 276, 346, 1904
Alw26I	GTCTC	1 cut(s)	691
Alw44I	GTGCAC	1 cut(s)	1900
AlwI	GGATC	5 cut(s)	155, 1043, 1139, 1152, 1939
AlwNI	CAGNNNCTG	2 cut(s)	1865, 1954
Ama87I	CYCGRG	1 cut(s)	41
AoxI	GGCC	8 cut(s)	108, 267, 1060, 1080, 1152, 1168, 1626, 1925
ApaLI	GTGCAC	1 cut(s)	1900
ApeKI	GCWGC	9 cut(s)	97, 100, 941, 1353, 1443, 1667, 1802, 1871, 1874
ApoI	RAATTY	3 cut(s)	1280, 1373, 1826
AseI	ATTAAT	1 cut(s)	1341
Asp700I	GAANNNNTTC	2 cut(s)	667, 1436
AspLEI	GCGC	1 cut(s)	40
AspS9I	GGNCC	3 cut(s)	486, 824, 1551
AsuHPI	GGTGA	3 cut(s)	1270, 1472, 1690
AsuNHI	GCTAGC	1 cut(s)	625
AvaI	CYCGRG	1 cut(s)	41
AvaII	GGWCC	3 cut(s)	486, 824, 1551
BaeGI	GKGCMC	1 cut(s)	1904
BalI	TGGCCA	1 cut(s)	1062
BamHI	GGATCC	1 cut(s)	1144
BanII	GRGCYC	3 cut(s)	87, 276, 346
BbsI	GAAGAC	1 cut(s)	419
Bbv12I	GWGCWC	5 cut(s)	87, 94, 276, 346, 1904
BbvI	GCAGC	9 cut(s)	84, 112, 928, 1340, 1430, 1654, 1789, 1861, 1883
BccI	CCATC	7 cut(s)	475, 646, 803, 1052, 1151, 1307, 1520
BceAI	ACGGC	1 cut(s)	1621
BciT130I	CCWGG	2 cut(s)	1190, 1949
BciVI	GTATCC	2 cut(s)	1589, 1670
BclI	TGATCA	1 cut(s)	1075
BcoDI	GTCTC	1 cut(s)	691
BcuI	ACTAGT	3 cut(s)	1043, 1114, 1894
BfaI	CTAG	8 cut(s)	423, 626, 630, 1044, 1115, 1449, 1682, 1895
BfmI	CTRYAG	3 cut(s)	98, 1093, 1803
BfuI	GTATCC	2 cut(s)	1589, 1670
BisI	GCNGC	9 cut(s)	98, 101, 942, 1354, 1444, 1668, 1803, 1872, 1875
BlpI	GCTNAGC	2 cut(s)	1067, 1955
BlsI	GCNGC	9 cut(s)	99, 102, 943, 1355, 1445, 1669, 1804, 1873, 1876
BmcAI	AGTACT	2 cut(s)	134, 1130
Bme1390I	CCNGG	2 cut(s)	1190, 1949
Bme18I	GGWCC	3 cut(s)	486, 824, 1551
BmeT110I	CYCGRG	1 cut(s)	41
BmgT120I	GGNCC	3 cut(s)	486, 824, 1551
BmiI	GGNNCC	2 cut(s)	487, 1146
BmrFI	CCNGG	2 cut(s)	1190, 1949
BmrI	ACTGGG	2 cut(s)	360, 1889
BmsI	GCATC	1 cut(s)	1921
BmtI	GCTAGC	1 cut(s)	629
BmuI	ACTGGG	2 cut(s)	360, 1889
BpiI	GAAGAC	1 cut(s)	419
BpmI	CTGGAG	1 cut(s)	699
Bpu1102I	GCTNAGC	2 cut(s)	1067, 1955
BpuEI	CTTGAG	2 cut(s)	157, 1145
Bsa29I	ATCGAT	1 cut(s)	1524
BsaBI	GATNNNNATC	1 cut(s)	366
BsaI	GGTCTC	1 cut(s)	691
BsaJI	CCNNGG	5 cut(s)	1083, 1149, 1171, 1188, 1254
BsaWI	WCCGGW	2 cut(s)	276, 287
BsaXI	ACNNNNNCTCC	4 cut(s)	841, 871, 1734, 1764
Bsc4I	CCNNNNNNNGG	5 cut(s)	170, 276, 495, 877, 1058
Bse118I	RCCGGY	2 cut(s)	259, 1624
Bse1I	ACTGG	6 cut(s)	355, 818, 1553, 1708, 1803, 1884
Bse3DI	GCAATG	3 cut(s)	895, 1578, 1677
Bse8I	GATNNNNATC	1 cut(s)	366
BseBI	CCWGG	2 cut(s)	1190, 1949
BseCI	ATCGAT	1 cut(s)	1524
BseDI	CCNNGG	5 cut(s)	1083, 1149, 1171, 1188, 1254
BseGI	GGATG	2 cut(s)	808, 1912
BseJI	GATNNNNATC	1 cut(s)	366
BseLI	CCNNNNNNNGG	5 cut(s)	170, 276, 495, 877, 1058
BseMI	GCAATG	3 cut(s)	895, 1578, 1677
BseMII	CTCAG	6 cut(s)	758, 864, 1298, 1353, 1707, 1946
BseNI	ACTGG	6 cut(s)	355, 818, 1553, 1708, 1803, 1884
BseRI	GAGGAG	1 cut(s)	846
BseSI	GKGCMC	1 cut(s)	1904
BseXI	GCAGC	9 cut(s)	84, 112, 928, 1340, 1430, 1654, 1789, 1861, 1883
BseYI	CCCAGC	1 cut(s)	983
BsgI	GTGCAG	2 cut(s)	1373, 1860
Bsh1236I	CGCG	1 cut(s)	64
BshFI	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1628, 1927
BshVI	ATCGAT	1 cut(s)	1524
BsiHKAI	GWGCWC	5 cut(s)	87, 94, 276, 346, 1904
BsiHKCI	CYCGRG	1 cut(s)	41
BsiSI	CCGG	4 cut(s)	260, 277, 288, 1625
BslFI	GGGAC	3 cut(s)	572, 1089, 1398
BslI	CCNNNNNNNGG	5 cut(s)	170, 276, 495, 877, 1058
BsmAI	GTCTC	1 cut(s)	691
BsmFI	GGGAC	3 cut(s)	572, 1089, 1398
BsmI	GAATGC	1 cut(s)	1469
BsnI	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1628, 1927
Bso31I	GGTCTC	1 cut(s)	691
BsoBI	CYCGRG	1 cut(s)	41
Bsp1286I	GDGCHC	5 cut(s)	87, 94, 276, 346, 1904
Bsp143I	GATC	7 cut(s)	160, 361, 583, 1048, 1075, 1144, 1944
Bsp1720I	GCTNAGC	2 cut(s)	1067, 1955
BspACI	CCGC	5 cut(s)	62, 263, 747, 935, 1009
BspANI	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1628, 1927
BspCNI	CTCAG	6 cut(s)	759, 865, 1299, 1354, 1708, 1947
BspDI	ATCGAT	1 cut(s)	1524
BspFNI	CGCG	1 cut(s)	64
BspHI	TCATGA	2 cut(s)	1411, 1906
BspLI	GGNNCC	2 cut(s)	487, 1146
BspMAI	CTGCAG	2 cut(s)	102, 1807
BspOI	GCTAGC	1 cut(s)	629
BspPI	GGATC	5 cut(s)	155, 1043, 1139, 1152, 1939
BspQI	GCTCTTC	2 cut(s)	197, 1268
BspTNI	GGTCTC	1 cut(s)	691
BsrDI	GCAATG	3 cut(s)	895, 1578, 1677
BsrFI	RCCGGY	2 cut(s)	259, 1624
BsrI	ACTGG	6 cut(s)	355, 818, 1553, 1708, 1803, 1884
BssAI	RCCGGY	2 cut(s)	259, 1624
BssECI	CCNNGG	5 cut(s)	1083, 1149, 1171, 1188, 1254
BssMI	GATC	7 cut(s)	160, 361, 583, 1048, 1075, 1144, 1944
BssNAI	GTATAC	2 cut(s)	398, 635
BssT1I	CCWWGG	3 cut(s)	1083, 1149, 1171
Bst1107I	GTATAC	2 cut(s)	398, 635
Bst2UI	CCWGG	2 cut(s)	1190, 1949
Bst4CI	ACNGT	2 cut(s)	844, 1942
Bst6I	CTCTTC	4 cut(s)	197, 488, 1268, 1291
BstC8I	GCNNGC	5 cut(s)	261, 550, 627, 939, 1064
BstENI	CCTNNNNNAGG	1 cut(s)	493
BstF5I	GGATG	2 cut(s)	808, 1912
BstFNI	CGCG	1 cut(s)	64
BstHHI	GCGC	1 cut(s)	40
BstKTI	GATC	7 cut(s)	163, 364, 586, 1051, 1078, 1147, 1947
BstMAI	GTCTC	1 cut(s)	691
BstMBI	GATC	7 cut(s)	160, 361, 583, 1048, 1075, 1144, 1944
BstMWI	GCNNNNNNNGC	6 cut(s)	577, 626, 950, 1068, 1452, 1933
BstNI	CCWGG	2 cut(s)	1190, 1949
BstSCI	CCNGG	2 cut(s)	1188, 1947
BstSFI	CTRYAG	3 cut(s)	98, 1093, 1803
BstSLI	GKGCMC	1 cut(s)	1904
BstUI	CGCG	1 cut(s)	64
BstV1I	GCAGC	9 cut(s)	84, 112, 928, 1340, 1430, 1654, 1789, 1861, 1883
BstV2I	GAAGAC	1 cut(s)	419
BstX2I	RGATCY	1 cut(s)	1144
BstXI	CCANNNNNNTGG	2 cut(s)	410, 461
BstYI	RGATCY	1 cut(s)	1144
BstZ17I	GTATAC	2 cut(s)	398, 635
Bsu15I	ATCGAT	1 cut(s)	1524
BsuI	GTATCC	2 cut(s)	1589, 1670
BsuRI	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1628, 1927
BsuTUI	ATCGAT	1 cut(s)	1524
BtsCI	GGATG	2 cut(s)	808, 1912
BtsI	GCAGTG	2 cut(s)	92, 1615
BtsIMutI	CAGTG	9 cut(s)	92, 764, 849, 1071, 1615, 1701, 1713, 1877, 1947
Cac8I	GCNNGC	5 cut(s)	261, 550, 627, 939, 1064
CaiI	CAGNNNCTG	2 cut(s)	1865, 1954
CciI	TCATGA	2 cut(s)	1411, 1906
CfoI	GCGC	1 cut(s)	40
Cfr10I	RCCGGY	2 cut(s)	259, 1624
Cfr13I	GGNCC	3 cut(s)	486, 824, 1551
ClaI	ATCGAT	1 cut(s)	1524
Csp6I	GTAC	5 cut(s)	133, 295, 609, 849, 1129
CviAII	CATG	8 cut(s)	144, 155, 1140, 1219, 1412, 1630, 1812, 1907
CviQI	GTAC	5 cut(s)	133, 295, 609, 849, 1129
DpnI	GATC	7 cut(s)	162, 363, 585, 1050, 1077, 1146, 1946
DpnII	GATC	7 cut(s)	160, 361, 583, 1048, 1075, 1144, 1944
EaeI	YGGCCR	4 cut(s)	267, 1060, 1152, 1626
Eam1104I	CTCTTC	4 cut(s)	197, 488, 1268, 1291
EarI	CTCTTC	4 cut(s)	197, 488, 1268, 1291
Ecl136II	GAGCTC	3 cut(s)	85, 274, 344
Eco130I	CCWWGG	3 cut(s)	1083, 1149, 1171
Eco147I	AGGCCT	1 cut(s)	110
Eco24I	GRGCYC	3 cut(s)	87, 276, 346
Eco31I	GGTCTC	1 cut(s)	691
Eco32I	GATATC	1 cut(s)	658
Eco47I	GGWCC	3 cut(s)	486, 824, 1551
Eco53kI	GAGCTC	3 cut(s)	85, 274, 344
Eco57I	CTGAAG	2 cut(s)	125, 1887
Eco88I	CYCGRG	1 cut(s)	41
EcoICRI	GAGCTC	3 cut(s)	85, 274, 344
EcoNI	CCTNNNNNAGG	1 cut(s)	493
EcoO109I	RGGNCCY	1 cut(s)	486
EcoRII	CCWGG	2 cut(s)	1188, 1947
EcoRV	GATATC	1 cut(s)	658
EcoT14I	CCWWGG	3 cut(s)	1083, 1149, 1171
EcoT22I	ATGCAT	2 cut(s)	1141, 1738
EcoT38I	GRGCYC	3 cut(s)	87, 276, 346
ErhI	CCWWGG	3 cut(s)	1083, 1149, 1171
FaeI	CATG	8 cut(s)	147, 158, 1143, 1222, 1415, 1633, 1815, 1910
FaqI	GGGAC	3 cut(s)	572, 1089, 1398
FatI	CATG	8 cut(s)	143, 154, 1139, 1218, 1411, 1629, 1811, 1906
FbaI	TGATCA	1 cut(s)	1075
FblI	GTMKAC	4 cut(s)	397, 634, 923, 1293
Fnu4HI	GCNGC	9 cut(s)	98, 101, 942, 1354, 1444, 1668, 1803, 1872, 1875
FokI	GGATG	2 cut(s)	815, 1899
FriOI	GRGCYC	3 cut(s)	87, 276, 346
Fsp4HI	GCNGC	9 cut(s)	98, 101, 942, 1354, 1444, 1668, 1803, 1872, 1875
FspBI	CTAG	8 cut(s)	423, 626, 630, 1044, 1115, 1449, 1682, 1895
GlaI	GCGC	1 cut(s)	39
GluI	GCNGC	9 cut(s)	98, 101, 942, 1354, 1444, 1668, 1803, 1872, 1875
GsaI	CCCAGC	1 cut(s)	987
GsuI	CTGGAG	1 cut(s)	699
HaeIII	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1628, 1927
HapII	CCGG	4 cut(s)	260, 277, 288, 1625
HhaI	GCGC	1 cut(s)	40
Hin1II	CATG	8 cut(s)	147, 158, 1143, 1222, 1415, 1633, 1815, 1910
Hin6I	GCGC	1 cut(s)	38
HinP1I	GCGC	1 cut(s)	38
HincII	GTYRAC	3 cut(s)	889, 924, 1834
HindII	GTYRAC	3 cut(s)	889, 924, 1834
HindIII	AAGCTT	1 cut(s)	550
HpaII	CCGG	4 cut(s)	260, 277, 288, 1625
HphI	GGTGA	3 cut(s)	1270, 1472, 1690
Hpy166II	GTNNAC	8 cut(s)	398, 635, 889, 924, 1261, 1294, 1834, 1902
Hpy188I	TCNGA	9 cut(s)	89, 330, 540, 662, 1057, 1255, 1308, 1363, 1892
Hpy188III	TCNNGA	9 cut(s)	116, 678, 700, 1124, 1412, 1514, 1688, 1907, 1916
Hpy8I	GTNNAC	8 cut(s)	398, 635, 889, 924, 1261, 1294, 1834, 1902
HpyAV	CCTTC	8 cut(s)	100, 119, 176, 229, 325, 707, 1062, 1375
HpyCH4III	ACNGT	2 cut(s)	844, 1942
HpyF10VI	GCNNNNNNNGC	6 cut(s)	577, 626, 950, 1068, 1452, 1933
Hsp92II	CATG	8 cut(s)	147, 158, 1143, 1222, 1415, 1633, 1815, 1910
HspAI	GCGC	1 cut(s)	38
KroI	GCCGGC	1 cut(s)	259
KroNI	GCCGGC	1 cut(s)	261
Ksp22I	TGATCA	1 cut(s)	1075
Kzo9I	GATC	7 cut(s)	160, 361, 583, 1048, 1075, 1144, 1944
LguI	GCTCTTC	2 cut(s)	197, 1268
LmnI	GCTCC	8 cut(s)	89, 279, 341, 465, 859, 1492, 1690, 1951
Lsp1109I	GCAGC	9 cut(s)	84, 112, 928, 1340, 1430, 1654, 1789, 1861, 1883
LweI	GCATC	1 cut(s)	1921
MaeI	CTAG	8 cut(s)	423, 626, 630, 1044, 1115, 1449, 1682, 1895
MaeIII	GTNAC	2 cut(s)	973, 1345
MalI	GATC	7 cut(s)	162, 363, 585, 1050, 1077, 1146, 1946
MboI	GATC	7 cut(s)	160, 361, 583, 1048, 1075, 1144, 1944
MboII	GAAGA	8 cut(s)	214, 419, 505, 1235, 1278, 1285, 1625, 1835
MfeI	CAATTG	1 cut(s)	910
MflI	RGATCY	1 cut(s)	1144
MhlI	GDGCHC	5 cut(s)	87, 94, 276, 346, 1904
MlsI	TGGCCA	1 cut(s)	1062
MluCI	AATT	9 cut(s)	598, 612, 667, 910, 948, 1280, 1373, 1826, 1853
MluNI	TGGCCA	1 cut(s)	1062
MlyI	GAGTC	5 cut(s)	731, 884, 1129, 1241, 1752
MmeI	TCCRAC	2 cut(s)	733, 802
Mox20I	TGGCCA	1 cut(s)	1062
Mph1103I	ATGCAT	2 cut(s)	1141, 1738
MreI	CGCCGGCG	1 cut(s)	259
MroNI	GCCGGC	1 cut(s)	259
MroXI	GAANNNNTTC	2 cut(s)	667, 1436
MscI	TGGCCA	1 cut(s)	1062
MseI	TTAA	6 cut(s)	500, 707, 833, 1332, 1341, 1571
MslI	CAYNNNNRTG	3 cut(s)	1343, 1608, 1790
Msp20I	TGGCCA	1 cut(s)	1062
MspA1I	CMGCKG	4 cut(s)	103, 457, 1353, 1874
MspI	CCGG	4 cut(s)	260, 277, 288, 1625
MspR9I	CCNGG	2 cut(s)	1190, 1949
MunI	CAATTG	1 cut(s)	910
Mva1269I	GAATGC	1 cut(s)	1469
MvaI	CCWGG	2 cut(s)	1190, 1949
MvnI	CGCG	1 cut(s)	64
MwoI	GCNNNNNNNGC	6 cut(s)	577, 626, 950, 1068, 1452, 1933
NaeI	GCCGGC	1 cut(s)	261
NdeII	GATC	7 cut(s)	160, 361, 583, 1048, 1075, 1144, 1944
NgoMIV	GCCGGC	1 cut(s)	259
NheI	GCTAGC	1 cut(s)	625
NlaIII	CATG	8 cut(s)	147, 158, 1143, 1222, 1415, 1633, 1815, 1910
NlaIV	GGNNCC	2 cut(s)	487, 1146
NmeAIII	GCCGAG	1 cut(s)	295
NmuCI	GTSAC	2 cut(s)	973, 1345
NsiI	ATGCAT	2 cut(s)	1141, 1738
OliI	CACNNNNGTG	1 cut(s)	1608
PagI	TCATGA	2 cut(s)	1411, 1906
PceI	AGGCCT	1 cut(s)	110
PciSI	GCTCTTC	2 cut(s)	197, 1268
PcsI	WCGNNNNNNNCGW	1 cut(s)	1521
PctI	GAATGC	1 cut(s)	1469
PdiI	GCCGGC	1 cut(s)	261
PdmI	GAANNNNTTC	2 cut(s)	667, 1436
PfeI	GAWTC	6 cut(s)	10, 325, 541, 1633, 1771, 1808
PfoI	TCCNGGA	1 cut(s)	1947
PkrI	GCNGC	9 cut(s)	99, 102, 943, 1355, 1445, 1669, 1804, 1873, 1876
PleI	GAGTC	5 cut(s)	730, 883, 1128, 1240, 1751
PpsI	GAGTC	5 cut(s)	730, 883, 1128, 1240, 1751
PpuMI	RGGWCCY	1 cut(s)	486
PshBI	ATTAAT	1 cut(s)	1341
PsiI	TTATAA	1 cut(s)	306
Psp124BI	GAGCTC	3 cut(s)	87, 276, 346
Psp5II	RGGWCCY	1 cut(s)	486
Psp6I	CCWGG	2 cut(s)	1188, 1947
PspFI	CCCAGC	1 cut(s)	983
PspGI	CCWGG	2 cut(s)	1188, 1947
PspN4I	GGNNCC	2 cut(s)	487, 1146
PspPI	GGNCC	3 cut(s)	486, 824, 1551
PspPPI	RGGWCCY	1 cut(s)	486
PsrI	GAACNNNNNNTAC	2 cut(s)	832, 864
PstI	CTGCAG	2 cut(s)	102, 1807
PstNI	CAGNNNCTG	2 cut(s)	1865, 1954
PsuI	RGATCY	1 cut(s)	1144
PvuII	CAGCTG	4 cut(s)	103, 457, 1353, 1874
RsaI	GTAC	5 cut(s)	134, 296, 610, 850, 1130
RsaNI	GTAC	5 cut(s)	133, 295, 609, 849, 1129
RseI	CAYNNNNRTG	3 cut(s)	1343, 1608, 1790
SacI	GAGCTC	3 cut(s)	87, 276, 346
SalI	GTCGAC	1 cut(s)	922
SapI	GCTCTTC	2 cut(s)	197, 1268
SaqAI	TTAA	6 cut(s)	500, 707, 833, 1332, 1341, 1571
SatI	GCNGC	9 cut(s)	98, 101, 942, 1354, 1444, 1668, 1803, 1872, 1875
Sau3AI	GATC	7 cut(s)	160, 361, 583, 1048, 1075, 1144, 1944
Sau96I	GGNCC	3 cut(s)	486, 824, 1551
ScaI	AGTACT	2 cut(s)	134, 1130
SchI	GAGTC	5 cut(s)	731, 884, 1129, 1241, 1752
ScrFI	CCNGG	2 cut(s)	1190, 1949
SduI	GDGCHC	5 cut(s)	87, 94, 276, 346, 1904
SfaNI	GCATC	1 cut(s)	1921
SfcI	CTRYAG	3 cut(s)	98, 1093, 1803
SgrAI	CRCCGGYG	1 cut(s)	259
SinI	GGWCC	3 cut(s)	486, 824, 1551
SmiMI	CAYNNNNRTG	3 cut(s)	1343, 1608, 1790
SmlI	CTYRAG	2 cut(s)	136, 1124
SmoI	CTYRAG	2 cut(s)	136, 1124
SpeI	ACTAGT	3 cut(s)	1043, 1114, 1894
Sse9I	AATT	9 cut(s)	598, 612, 667, 910, 948, 1280, 1373, 1826, 1853
SseBI	AGGCCT	1 cut(s)	110
SsiI	CCGC	5 cut(s)	62, 263, 747, 935, 1009
SspMI	CTAG	8 cut(s)	423, 626, 630, 1044, 1115, 1449, 1682, 1895
SstI	GAGCTC	3 cut(s)	87, 276, 346
StuI	AGGCCT	1 cut(s)	110
StyD4I	CCNGG	2 cut(s)	1188, 1947
StyI	CCWWGG	3 cut(s)	1083, 1149, 1171
TaaI	ACNGT	2 cut(s)	844, 1942
TaqI	TCGA	5 cut(s)	8, 807, 923, 1515, 1524
TasI	AATT	9 cut(s)	598, 612, 667, 910, 948, 1280, 1373, 1826, 1853
TatI	WGTACW	3 cut(s)	132, 294, 1128
TfiI	GAWTC	6 cut(s)	10, 325, 541, 1633, 1771, 1808
Tru1I	TTAA	6 cut(s)	500, 707, 833, 1332, 1341, 1571
Tru9I	TTAA	6 cut(s)	500, 707, 833, 1332, 1341, 1571
TscAI	CASTG	9 cut(s)	99, 771, 849, 1078, 1615, 1708, 1720, 1884, 1947
TseFI	GTSAC	2 cut(s)	973, 1345
TseI	GCWGC	9 cut(s)	97, 100, 941, 1353, 1443, 1667, 1802, 1871, 1874
Tsp45I	GTSAC	2 cut(s)	973, 1345
TspDTI	ATGAA	5 cut(s)	132, 726, 1428, 1625, 1836
TspGWI	ACGGA	2 cut(s)	153, 806
TspRI	CASTG	9 cut(s)	99, 771, 849, 1078, 1615, 1708, 1720, 1884, 1947
VneI	GTGCAC	1 cut(s)	1900
VpaK11BI	GGWCC	3 cut(s)	486, 824, 1551
VspI	ATTAAT	1 cut(s)	1341
XagI	CCTNNNNNAGG	1 cut(s)	493
XapI	RAATTY	3 cut(s)	1280, 1373, 1826
XmiI	GTMKAC	4 cut(s)	397, 634, 923, 1293
XmnI	GAANNNNTTC	2 cut(s)	667, 1436
XspI	CTAG	8 cut(s)	423, 626, 630, 1044, 1115, 1449, 1682, 1895
ZrmI	AGTACT	2 cut(s)	134, 1130
Zsp2I	ATGCAT	2 cut(s)	1141, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.