Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0012037

Physical Location & Seq

Genomic Coordinates Reverse (-)

18504522 .. 18507941

Gene Structure 3420 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG196900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGGGGTCCTTGAAGAGGTTAAGTGTTCTTGCTTTGCAGTATAACAGAATATATGGTCAGATTCCTGCAAGCTTGGGGGACTTAGGGTTGCTCAAAAGGCTTGATCTGGGCTTCAATAATTTCTCTGGTACAATTCCTGCAAAGCTAGCTAGTATACCATCTTTGGAACTCTTAGATATCCGAAATAATTCTCTTTCTGGAGTGGTCTCTCCTGCTTTCAAGAGATTAAATGAAGGATTTGAGTCTGCAAACAACCCAGAACTATGCGGAGTTGGATTTTCTACACTGAGAAATTGCACATCTTTTGACACGGACAGAGTGGATGTCGATGGACTACCAGTTGGACCAAACTTAAATGGAACAGTGGGTACTGCTCCTCCAAAAGCCAACCCTGAGTCGGTAGATGTCAACACCCATTGCAACCAAAACAATTGCAAAAAGTCGACCAGATTTCCGCAAGCTGCTGTAATTGCAGGAGTTATTGCACTCATTGTCACATTGGCTGGGGGTGTATTTCTGGCTCTTGTGCGGAACAGACGAAAGAAACAAAAGATTGGGAATACTAGTGATCCTTCTGATGGCCAGCTTAGCACTGATCAGGCCAAGGAGTTCTACAGGAGAAGTCCCTCTCCACTAGTGAGTCTTGAGTACTCTAATGCATGGGATCCCTTGGCCGATGGGCAAAATGGCCTTGGTTTCTCTTTCTCCCAGGAGTATCTCAAAAGCTATTGGTTCAACATGGAAGATGTGGAGTCTGCAACACAGTACTTCTCCGAGGTGAACTTGTTAGGGAAGAGCAAATTCTCTTCTGTCTACAAAGGAGTTCTGAGAGATGGTTCTCTTGTAGCTGTTAAGAGCATTAATGTGACCAGCTGCAAGTCTGAGGAAGCTGAATTTGTGAAGGGACTGCACTTAGTATTTTCGCTAACTCATGAAAACCTTGTCAAGTTGAAAGGTTTCTGCTGCTCTAGGGGCAGAGGTGAATGCTTCCTTATCTATGGTTTTGCTCCTAATGGAAACCTCTCTCAATATCTCGATGTAATCGATGGAAAGAACCAAGTCCTTGACTGGTCCAAGAGAGTTTCTATCTTAAAGGGCATTGCAAAAGGTATTGGATACTTGCACGGCAGTGAAGAAAACAAACCGGCCATGATTCATCAAAACATCTCTGTTGAAAAGGTTCTCCTTGATCAGCAATTTAAGCCATTGATTTCAGACTCTGGCCTTCCTAAGCTGCTAGCTGATGACATTGTCTTCTCCACTCTGAAGACAAGTGCTGCAATGGGATACCTAGCTCCTGAATATATCACCACTGGTCGTTTCACTGAGAAAAGTGATGTATATGCATTTGGAGTCATTGTCCTCCAAGTTATATCAGGCAATCTACAACTCAACACTTCAATGCGACTGGCTGCAGAATCATGCAGATATGAAGAATTTGTTGACACCAATCTAAAAGGGCAATTCTCAGAACCTGAAGCAGCTGCACTGGGAAAACTCGGACTAGTGTGCACTCATGAGCATCCTGACCAAAGGCCAACAATGAAGACAGTGATCCAGGAGCTGAGCAACCTTACAGCGAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

528

Amino Acids

57.54

Weight (kDa)

7.51

Isoelectric Point (pI)

28.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	6 - 65	2.5e-06	Leucine rich repeat
Pkinase	PF00069	258 - 520	1.5e-26	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	261 - 522	2.4e-37	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22730 AT4G22730
fragaria_vesca	FvH4_5g00660 FvH4_5g00660 FvH4_5g00660 FvH4_5g00660
malus_domestica	MD04G1079600.v1.1
prunus_persica	Prupe.5G079400_v2.0.a1
pyrus_communis	pycom04g07170
rosa_chinensis	RchiOBHm_Chr7g0201601
rosa_laevigata	RLG00000003662
rosa_multiflora	Rmu_ssc0000304.1_g000002
rosa_roxburghii	Rroxscaffold_3G00255210
rosa_rugosa	Rorug07G0065100
rosa_samantha	Rh7AG191600 Rh7BG193900 Rh7CG203000 Rh7DG196900
rosa_wichuraiana	Rw7G016800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	3 cut(s)	154, 443, 813
AciI	CCGC	3 cut(s)	267, 455, 529
AclWI	GGATC	4 cut(s)	563, 659, 672, 1549
AcoI	YGGCCR	3 cut(s)	580, 672, 1146
AcsI	RAATTY	3 cut(s)	800, 893, 1436
AcuI	CTGAAG	2 cut(s)	1286, 1497
AfaI	GTAC	4 cut(s)	130, 370, 650, 767
AfiI	CCNNNNNNNGG	3 cut(s)	15, 397, 578
AgsI	TTSAA	7 cut(s)	13, 115, 220, 736, 952, 1175, 1401
AhlI	ACTAGT	3 cut(s)	563, 634, 1504
AjnI	CCWGG	2 cut(s)	708, 1557
AleI	CACNNNNGTG	1 cut(s)	1128
Alw21I	GWGCWC	1 cut(s)	1514
Alw26I	GTCTC	1 cut(s)	211
Alw44I	GTGCAC	1 cut(s)	1510
AlwI	GGATC	4 cut(s)	563, 659, 672, 1549
AlwNI	CAGNNNCTG	3 cut(s)	1220, 1475, 1564
AoxI	GGCC	7 cut(s)	580, 600, 672, 688, 1146, 1222, 1535
ApaLI	GTGCAC	1 cut(s)	1510
ApeKI	GCWGC	8 cut(s)	461, 873, 963, 1234, 1277, 1412, 1481, 1484
ApoI	RAATTY	3 cut(s)	800, 893, 1436
AseI	ATTAAT	1 cut(s)	861
Asp700I	GAANNNNTTC	3 cut(s)	187, 956, 1179
AspS9I	GGNCC	3 cut(s)	6, 344, 1071
AsuHPI	GGTGA	3 cut(s)	790, 992, 1300
AsuNHI	GCTAGC	2 cut(s)	145, 1237
AvaII	GGWCC	3 cut(s)	6, 344, 1071
BaeGI	GKGCMC	1 cut(s)	1514
BalI	TGGCCA	1 cut(s)	582
BamHI	GGATCC	1 cut(s)	664
BbsI	GAAGAC	3 cut(s)	1246, 1274, 1553
Bbv12I	GWGCWC	1 cut(s)	1514
BbvI	GCAGC	8 cut(s)	448, 860, 950, 1221, 1264, 1399, 1471, 1493
BccI	CCATC	6 cut(s)	166, 323, 572, 671, 827, 1040
BceAI	ACGGC	1 cut(s)	1141
BciT130I	CCWGG	2 cut(s)	710, 1559
BciVI	GTATCC	2 cut(s)	1109, 1280
BclI	TGATCA	2 cut(s)	595, 1189
BcoDI	GTCTC	1 cut(s)	211
BcuI	ACTAGT	3 cut(s)	563, 634, 1504
BfaI	CTAG	8 cut(s)	146, 150, 564, 635, 969, 1238, 1292, 1505
BfmI	CTRYAG	2 cut(s)	613, 1413
BfuI	GTATCC	2 cut(s)	1109, 1280
BisI	GCNGC	8 cut(s)	462, 874, 964, 1235, 1278, 1413, 1482, 1485
BlpI	GCTNAGC	2 cut(s)	587, 1565
BlsI	GCNGC	8 cut(s)	463, 875, 965, 1236, 1279, 1414, 1483, 1486
BmcAI	AGTACT	2 cut(s)	650, 767
Bme1390I	CCNGG	2 cut(s)	710, 1559
Bme18I	GGWCC	3 cut(s)	6, 344, 1071
BmgT120I	GGNCC	3 cut(s)	6, 344, 1071
BmiI	GGNNCC	2 cut(s)	7, 666
BmrFI	CCNGG	2 cut(s)	710, 1559
BmrI	ACTGGG	1 cut(s)	1499
BmsI	GCATC	1 cut(s)	1531
BmtI	GCTAGC	2 cut(s)	149, 1241
BmuI	ACTGGG	1 cut(s)	1499
BpiI	GAAGAC	3 cut(s)	1246, 1274, 1553
BpmI	CTGGAG	1 cut(s)	219
Bpu10I	CCTNAGC	1 cut(s)	1230
Bpu1102I	GCTNAGC	2 cut(s)	587, 1565
BpuEI	CTTGAG	1 cut(s)	665
Bsa29I	ATCGAT	1 cut(s)	1044
BsaI	GGTCTC	1 cut(s)	211
BsaJI	CCNNGG	5 cut(s)	603, 669, 691, 708, 774
BsaXI	ACNNNNNCTCC	4 cut(s)	361, 391, 1344, 1374
Bsc4I	CCNNNNNNNGG	3 cut(s)	15, 397, 578
Bse118I	RCCGGY	1 cut(s)	1144
Bse1I	ACTGG	5 cut(s)	338, 1073, 1318, 1413, 1494
Bse3DI	GCAATG	3 cut(s)	415, 1098, 1287
BseBI	CCWGG	2 cut(s)	710, 1559
BseCI	ATCGAT	1 cut(s)	1044
BseDI	CCNNGG	5 cut(s)	603, 669, 691, 708, 774
BseGI	GGATG	2 cut(s)	328, 1522
BseLI	CCNNNNNNNGG	3 cut(s)	15, 397, 578
BseMI	GCAATG	3 cut(s)	415, 1098, 1287
BseMII	CTCAG	7 cut(s)	278, 384, 818, 873, 1317, 1482, 1556
BseNI	ACTGG	5 cut(s)	338, 1073, 1318, 1413, 1494
BseRI	GAGGAG	1 cut(s)	366
BseSI	GKGCMC	1 cut(s)	1514
BseXI	GCAGC	8 cut(s)	448, 860, 950, 1221, 1264, 1399, 1471, 1493
BseYI	CCCAGC	1 cut(s)	503
BsgI	GTGCAG	2 cut(s)	893, 1470
BshFI	GGCC	7 cut(s)	582, 602, 674, 690, 1148, 1224, 1537
BshVI	ATCGAT	1 cut(s)	1044
BsiHKAI	GWGCWC	1 cut(s)	1514
BsiSI	CCGG	1 cut(s)	1145
BslFI	GGGAC	3 cut(s)	92, 609, 918
BslI	CCNNNNNNNGG	3 cut(s)	15, 397, 578
BsmAI	GTCTC	1 cut(s)	211
BsmFI	GGGAC	3 cut(s)	92, 609, 918
BsmI	GAATGC	1 cut(s)	989
BsnI	GGCC	7 cut(s)	582, 602, 674, 690, 1148, 1224, 1537
Bso31I	GGTCTC	1 cut(s)	211
Bsp1286I	GDGCHC	1 cut(s)	1514
Bsp143I	GATC	6 cut(s)	103, 568, 595, 664, 1189, 1554
Bsp1720I	GCTNAGC	2 cut(s)	587, 1565
BspACI	CCGC	3 cut(s)	267, 455, 529
BspANI	GGCC	7 cut(s)	582, 602, 674, 690, 1148, 1224, 1537
BspCNI	CTCAG	7 cut(s)	279, 385, 819, 874, 1318, 1481, 1557
BspDI	ATCGAT	1 cut(s)	1044
BspHI	TCATGA	2 cut(s)	931, 1516
BspLI	GGNNCC	2 cut(s)	7, 666
BspMAI	CTGCAG	1 cut(s)	1417
BspOI	GCTAGC	2 cut(s)	149, 1241
BspPI	GGATC	4 cut(s)	563, 659, 672, 1549
BspQI	GCTCTTC	1 cut(s)	788
BspTNI	GGTCTC	1 cut(s)	211
BsrDI	GCAATG	3 cut(s)	415, 1098, 1287
BsrFI	RCCGGY	1 cut(s)	1144
BsrI	ACTGG	5 cut(s)	338, 1073, 1318, 1413, 1494
BssAI	RCCGGY	1 cut(s)	1144
BssECI	CCNNGG	5 cut(s)	603, 669, 691, 708, 774
BssMI	GATC	6 cut(s)	103, 568, 595, 664, 1189, 1554
BssNAI	GTATAC	1 cut(s)	155
BssT1I	CCWWGG	3 cut(s)	603, 669, 691
Bst1107I	GTATAC	1 cut(s)	155
Bst2UI	CCWGG	2 cut(s)	710, 1559
Bst4CI	ACNGT	3 cut(s)	364, 765, 1552
Bst6I	CTCTTC	3 cut(s)	8, 788, 811
BstC8I	GCNNGC	5 cut(s)	70, 147, 459, 584, 1239
BstENI	CCTNNNNNAGG	1 cut(s)	13
BstF5I	GGATG	2 cut(s)	328, 1522
BstKTI	GATC	6 cut(s)	106, 571, 598, 667, 1192, 1557
BstMAI	GTCTC	1 cut(s)	211
BstMBI	GATC	6 cut(s)	103, 568, 595, 664, 1189, 1554
BstMWI	GCNNNNNNNGC	6 cut(s)	97, 146, 470, 588, 972, 1201
BstNI	CCWGG	2 cut(s)	710, 1559
BstSCI	CCNGG	2 cut(s)	708, 1557
BstSFI	CTRYAG	2 cut(s)	613, 1413
BstSLI	GKGCMC	1 cut(s)	1514
BstV1I	GCAGC	8 cut(s)	448, 860, 950, 1221, 1264, 1399, 1471, 1493
BstV2I	GAAGAC	3 cut(s)	1246, 1274, 1553
BstX2I	RGATCY	1 cut(s)	664
BstYI	RGATCY	1 cut(s)	664
BstZ17I	GTATAC	1 cut(s)	155
Bsu15I	ATCGAT	1 cut(s)	1044
BsuI	GTATCC	2 cut(s)	1109, 1280
BsuRI	GGCC	7 cut(s)	582, 602, 674, 690, 1148, 1224, 1537
BsuTUI	ATCGAT	1 cut(s)	1044
BtsCI	GGATG	2 cut(s)	328, 1522
BtsI	GCAGTG	1 cut(s)	1135
BtsIMutI	CAGTG	8 cut(s)	284, 369, 591, 1135, 1311, 1323, 1487, 1557
Cac8I	GCNNGC	5 cut(s)	70, 147, 459, 584, 1239
CaiI	CAGNNNCTG	3 cut(s)	1220, 1475, 1564
CciI	TCATGA	2 cut(s)	931, 1516
Cfr10I	RCCGGY	1 cut(s)	1144
Cfr13I	GGNCC	3 cut(s)	6, 344, 1071
ClaI	ATCGAT	1 cut(s)	1044
Csp6I	GTAC	4 cut(s)	129, 369, 649, 766
CviAII	CATG	6 cut(s)	660, 739, 932, 1150, 1422, 1517
CviQI	GTAC	4 cut(s)	129, 369, 649, 766
DpnI	GATC	6 cut(s)	105, 570, 597, 666, 1191, 1556
DpnII	GATC	6 cut(s)	103, 568, 595, 664, 1189, 1554
EaeI	YGGCCR	3 cut(s)	580, 672, 1146
Eam1104I	CTCTTC	3 cut(s)	8, 788, 811
EarI	CTCTTC	3 cut(s)	8, 788, 811
Eco130I	CCWWGG	3 cut(s)	603, 669, 691
Eco31I	GGTCTC	1 cut(s)	211
Eco32I	GATATC	1 cut(s)	178
Eco47I	GGWCC	3 cut(s)	6, 344, 1071
Eco57I	CTGAAG	2 cut(s)	1286, 1497
EcoNI	CCTNNNNNAGG	1 cut(s)	13
EcoO109I	RGGNCCY	1 cut(s)	6
EcoRII	CCWGG	2 cut(s)	708, 1557
EcoRV	GATATC	1 cut(s)	178
EcoT14I	CCWWGG	3 cut(s)	603, 669, 691
EcoT22I	ATGCAT	2 cut(s)	661, 1348
ErhI	CCWWGG	3 cut(s)	603, 669, 691
FaeI	CATG	6 cut(s)	663, 742, 935, 1153, 1425, 1520
FaqI	GGGAC	3 cut(s)	92, 609, 918
FatI	CATG	6 cut(s)	659, 738, 931, 1149, 1421, 1516
FbaI	TGATCA	2 cut(s)	595, 1189
FblI	GTMKAC	3 cut(s)	154, 443, 813
Fnu4HI	GCNGC	8 cut(s)	462, 874, 964, 1235, 1278, 1413, 1482, 1485
FokI	GGATG	2 cut(s)	335, 1509
Fsp4HI	GCNGC	8 cut(s)	462, 874, 964, 1235, 1278, 1413, 1482, 1485
FspBI	CTAG	8 cut(s)	146, 150, 564, 635, 969, 1238, 1292, 1505
GluI	GCNGC	8 cut(s)	462, 874, 964, 1235, 1278, 1413, 1482, 1485
GsaI	CCCAGC	1 cut(s)	507
GsuI	CTGGAG	1 cut(s)	219
HaeIII	GGCC	7 cut(s)	582, 602, 674, 690, 1148, 1224, 1537
HapII	CCGG	1 cut(s)	1145
Hin1II	CATG	6 cut(s)	663, 742, 935, 1153, 1425, 1520
HincII	GTYRAC	3 cut(s)	409, 444, 1444
HindII	GTYRAC	3 cut(s)	409, 444, 1444
HindIII	AAGCTT	1 cut(s)	70
HinfI	GANTC	9 cut(s)	61, 242, 395, 640, 752, 1153, 1217, 1353, 1418
HpaII	CCGG	1 cut(s)	1145
HphI	GGTGA	3 cut(s)	790, 992, 1300
Hpy166II	GTNNAC	7 cut(s)	155, 409, 444, 781, 814, 1444, 1512
Hpy188III	TCNNGA	8 cut(s)	198, 220, 644, 932, 1034, 1298, 1517, 1526
Hpy8I	GTNNAC	7 cut(s)	155, 409, 444, 781, 814, 1444, 1512
HpyAV	CCTTC	4 cut(s)	227, 582, 895, 1235
HpyCH4III	ACNGT	3 cut(s)	364, 765, 1552
HpyF10VI	GCNNNNNNNGC	6 cut(s)	97, 146, 470, 588, 972, 1201
Hsp92II	CATG	6 cut(s)	663, 742, 935, 1153, 1425, 1520
Ksp22I	TGATCA	2 cut(s)	595, 1189
Kzo9I	GATC	6 cut(s)	103, 568, 595, 664, 1189, 1554
LguI	GCTCTTC	1 cut(s)	788
LmnI	GCTCC	4 cut(s)	379, 1012, 1300, 1561
Lsp1109I	GCAGC	8 cut(s)	448, 860, 950, 1221, 1264, 1399, 1471, 1493
LweI	GCATC	1 cut(s)	1531
MaeI	CTAG	8 cut(s)	146, 150, 564, 635, 969, 1238, 1292, 1505
MaeIII	GTNAC	2 cut(s)	493, 865
MalI	GATC	6 cut(s)	105, 570, 597, 666, 1191, 1556
MboI	GATC	6 cut(s)	103, 568, 595, 664, 1189, 1554
MboII	GAAGA	9 cut(s)	25, 755, 798, 805, 1145, 1246, 1279, 1445, 1558
MfeI	CAATTG	1 cut(s)	430
MflI	RGATCY	1 cut(s)	664
MhlI	GDGCHC	1 cut(s)	1514
MlsI	TGGCCA	1 cut(s)	582
MluNI	TGGCCA	1 cut(s)	582
MlyI	GAGTC	6 cut(s)	251, 404, 649, 761, 1211, 1362
MmeI	TCCRAC	2 cut(s)	253, 322
MnlI	CCTC	8 cut(s)	9, 387, 637, 769, 877, 971, 1031, 1373
Mox20I	TGGCCA	1 cut(s)	582
Mph1103I	ATGCAT	2 cut(s)	661, 1348
MroXI	GAANNNNTTC	3 cut(s)	187, 956, 1179
MscI	TGGCCA	1 cut(s)	582
MseI	TTAA	7 cut(s)	20, 227, 353, 852, 861, 1091, 1200
MslI	CAYNNNNRTG	3 cut(s)	863, 1128, 1400
Msp20I	TGGCCA	1 cut(s)	582
MspA1I	CMGCKG	2 cut(s)	873, 1484
MspI	CCGG	1 cut(s)	1145
MspR9I	CCNGG	2 cut(s)	710, 1559
MunI	CAATTG	1 cut(s)	430
Mva1269I	GAATGC	1 cut(s)	989
MvaI	CCWGG	2 cut(s)	710, 1559
MwoI	GCNNNNNNNGC	6 cut(s)	97, 146, 470, 588, 972, 1201
NdeII	GATC	6 cut(s)	103, 568, 595, 664, 1189, 1554
NheI	GCTAGC	2 cut(s)	145, 1237
NlaIII	CATG	6 cut(s)	663, 742, 935, 1153, 1425, 1520
NlaIV	GGNNCC	2 cut(s)	7, 666
NmuCI	GTSAC	2 cut(s)	493, 865
NsiI	ATGCAT	2 cut(s)	661, 1348
OliI	CACNNNNGTG	1 cut(s)	1128
PagI	TCATGA	2 cut(s)	931, 1516
PciSI	GCTCTTC	1 cut(s)	788
PcsI	WCGNNNNNNNCGW	1 cut(s)	1041
PctI	GAATGC	1 cut(s)	989
PdmI	GAANNNNTTC	3 cut(s)	187, 956, 1179
PfeI	GAWTC	3 cut(s)	61, 1153, 1418
PflFI	GACNNNGTC	1 cut(s)	1250
PfoI	TCCNGGA	1 cut(s)	1557
PkrI	GCNGC	8 cut(s)	463, 875, 965, 1236, 1279, 1414, 1483, 1486
PleI	GAGTC	6 cut(s)	250, 403, 648, 760, 1211, 1361
PpsI	GAGTC	6 cut(s)	250, 403, 648, 760, 1211, 1361
PpuMI	RGGWCCY	1 cut(s)	6
PshBI	ATTAAT	1 cut(s)	861
Psp5II	RGGWCCY	1 cut(s)	6
Psp6I	CCWGG	2 cut(s)	708, 1557
PspFI	CCCAGC	1 cut(s)	503
PspGI	CCWGG	2 cut(s)	708, 1557
PspN4I	GGNNCC	2 cut(s)	7, 666
PspPI	GGNCC	3 cut(s)	6, 344, 1071
PspPPI	RGGWCCY	1 cut(s)	6
PsrI	GAACNNNNNNTAC	2 cut(s)	352, 384
PstI	CTGCAG	1 cut(s)	1417
PstNI	CAGNNNCTG	3 cut(s)	1220, 1475, 1564
PsuI	RGATCY	1 cut(s)	664
PsyI	GACNNNGTC	1 cut(s)	1250
PvuII	CAGCTG	2 cut(s)	873, 1484
RsaI	GTAC	4 cut(s)	130, 370, 650, 767
RsaNI	GTAC	4 cut(s)	129, 369, 649, 766
RseI	CAYNNNNRTG	3 cut(s)	863, 1128, 1400
SalI	GTCGAC	1 cut(s)	442
SapI	GCTCTTC	1 cut(s)	788
SaqAI	TTAA	7 cut(s)	20, 227, 353, 852, 861, 1091, 1200
SatI	GCNGC	8 cut(s)	462, 874, 964, 1235, 1278, 1413, 1482, 1485
Sau3AI	GATC	6 cut(s)	103, 568, 595, 664, 1189, 1554
Sau96I	GGNCC	3 cut(s)	6, 344, 1071
ScaI	AGTACT	2 cut(s)	650, 767
SchI	GAGTC	6 cut(s)	251, 404, 649, 761, 1211, 1362
ScrFI	CCNGG	2 cut(s)	710, 1559
SduI	GDGCHC	1 cut(s)	1514
SfaNI	GCATC	1 cut(s)	1531
SfcI	CTRYAG	2 cut(s)	613, 1413
SinI	GGWCC	3 cut(s)	6, 344, 1071
SmiMI	CAYNNNNRTG	3 cut(s)	863, 1128, 1400
SmlI	CTYRAG	1 cut(s)	644
SmoI	CTYRAG	1 cut(s)	644
SpeI	ACTAGT	3 cut(s)	563, 634, 1504
SsiI	CCGC	3 cut(s)	267, 455, 529
SspMI	CTAG	8 cut(s)	146, 150, 564, 635, 969, 1238, 1292, 1505
StyD4I	CCNGG	2 cut(s)	708, 1557
StyI	CCWWGG	3 cut(s)	603, 669, 691
TaaI	ACNGT	3 cut(s)	364, 765, 1552
TaqI	TCGA	4 cut(s)	327, 443, 1035, 1044
TatI	WGTACW	2 cut(s)	648, 765
TfiI	GAWTC	3 cut(s)	61, 1153, 1418
Tru1I	TTAA	7 cut(s)	20, 227, 353, 852, 861, 1091, 1200
Tru9I	TTAA	7 cut(s)	20, 227, 353, 852, 861, 1091, 1200
TscAI	CASTG	8 cut(s)	291, 369, 598, 1135, 1318, 1330, 1494, 1557
TseFI	GTSAC	2 cut(s)	493, 865
TseI	GCWGC	8 cut(s)	461, 873, 963, 1234, 1277, 1412, 1481, 1484
Tsp45I	GTSAC	2 cut(s)	493, 865
TspDTI	ATGAA	5 cut(s)	246, 948, 1145, 1446, 1559
TspGWI	ACGGA	1 cut(s)	326
TspRI	CASTG	8 cut(s)	291, 369, 598, 1135, 1318, 1330, 1494, 1557
Tth111I	GACNNNGTC	1 cut(s)	1250
VneI	GTGCAC	1 cut(s)	1510
VpaK11BI	GGWCC	3 cut(s)	6, 344, 1071
VspI	ATTAAT	1 cut(s)	861
XagI	CCTNNNNNAGG	1 cut(s)	13
XapI	RAATTY	3 cut(s)	800, 893, 1436
XmiI	GTMKAC	3 cut(s)	154, 443, 813
XmnI	GAANNNNTTC	3 cut(s)	187, 956, 1179
XspI	CTAG	8 cut(s)	146, 150, 564, 635, 969, 1238, 1292, 1505
ZrmI	AGTACT	2 cut(s)	650, 767
Zsp2I	ATGCAT	2 cut(s)	661, 1348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.