Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0012037

Physical Location & Seq

Genomic Coordinates Forward (+)

49466122 .. 49469273

Gene Structure 3152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00255210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGGTTCGATTCGTTTTCTCATTTCTCTGTTTCTTGTGCTCTGGGTTTTTTGCCCTCCACCGCGAGTTTGGGGAAATGCAGAGCTCGGAGCACTGCTGCAGCTGAAGGCCTCTCTTGACCCAGAAGGCAAGTACTTGAGTTCGTGGACTGAACATGGTGATCCGTGTAGTGGAACATTTGAAGGTGTGGCGTGTAATGAGAAAAGCAAAGTGGCTAATGTTTCTTTGCAGGGGAAGGGTCTTTCGGGTCGGCTTTCTCCTGCGGTGGCCGGGCTCCGGTGCTTGTCCGGTCTGTACTTGCATTATAATAACTTGTCAGGGGAGATTCCGAAAGAGATTGGAGCTCTAACTGGGCTTACTGATCTGTATCTCAATGTGAATAATCTCTCTGGGGGTATACCCCAAGAGATTGGGAAAATGGCTAATCTTCAAGTTTTACAGCTATGTTGTAACCAGCTGAATGGGAGCATACCTACACAGATGGGGTCCTTGAAGAGGTTAAGTGTTCTTGCTTTGCAGTATAACAGAATAGCTGGTCAGATTCCTGCAAGCTTGGGGAACTTAGGGATGCTCAAAAGGCTTGATCTGGGCTTCAATAAGTTCTTTGGTACAATTCCTGCAAAGCTAGCTAGTATACCATCTTTGGAACTCTTAGATATCCGAAATAATTCTCTTTCCGGAGTGGTCTCTCCTGCTTTCAAGAGATTAAATGAAGGATTTGAGTCTGCAAACAACCCAGAACTATGCGGAGTTGGATTTTCTACACTGAGAACTTGCACATCTTTTGACACGGACAGAGCGGATGTCGATGGACTACCACTTGGACCAAACTTAAATGGAACAGTGGGTACTGCTCCTCCAAAAGCCAACCCGGAGTCAGTAGATGTCAACACCCATTGCAACCAAAACAATTGCAAAAAGTCGACCAAATTTCCGCAAGCTGCTGTAATTGCAGGAGTTATTGCACTCATTGTCACATTGGCTGGGGGTGTATTTCTGGCTCTTGTGCGGAACAGAAGAAAGAAACAAAAGATTGGGAATACTTGTGATCCTTCTGATGGCCAGCTTAGCACTGATCAGGCCAAGGAGTTCTACAGGAGAAGTCCCTCTCCACTTGTGAGTCTTGAGTACTCTAATGCATGGGATCCGTTGGCCGATGGACAAAATGGCCTTGGTTTCTCCTTCTCCCAGGAGTATCTAAAAAGCTATTGGTTCAACATGGAAGATGTGGAGTCTGCAACACAGTACTTCTCCGAGGTGAACCTGTTAGGGAAGAGCAAATTCTCTTCTGTCTACAAAGGAGTTCTGAGAGATGGTTCTCTTGTAGCTGTTAAGAGCATTAATGTGACCAGCTGCAAGTCTGAGGAAGCTGAATTTGTGAAGGGACTGCACTTAGTATTTTCGCTAACTCATGAAAACCTTGTCAAGCTGAAAGGTTTCTGCTGCTCTAGGGGCAGAGGTGAATGCTTCCTTATCTATGATTTTGCTCCTAATGGAAACCTCTCTCAATATCTCGATGTAATCGATGGAAAGAATCAAGTCCTTGACTGGTCCAAGAGAGTTTCCATCTTAAATGGTATTGCAAAAGGTATTGGATACTTGCACTGCAGTGAAGAAAACAAACCAGCCATGATTCATCAAAACATCTCTGTTGAAAAGGTTCTCCTTGATCAGCAATTTAAGCCATTGATTTCGGACTCTGGCCTTCCTAAGCTGCTAGCTGATGACATTGTCTTCTCCACTCTGAAGACAAGTGCTGCAATGGGATACCTAGCTCCTGAATATATCACCACTGGTCGTTTCACTGAGAAAAGTGATGTATATGCATTTGGAGTCATTGTCCTCCAAGTTATATCAGGGAATCTACAACTCAACACTTCAATGAGACTGGCTGCAGAATCATGCAGATATGAAGAATTTGTCGACACCAATCTAAAAGGGCAATTCTCAGAACCTGAAGCAGCTGCACTGGGAAAACTCGGACTAGTGTGCACCCATGAGCATCCTGTCCAAAGGCCAACAATGCAGACAGTGATCCAGGAGCTGAGCAACCTTACAGCAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005618 GO:0005623 GO:0007275 GO:0007389 GO:0008150 GO:0009505 GO:0009531 GO:0009553 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009888 GO:0010154 GO:0010453 GO:0022414 GO:0022603 GO:0030312 GO:0032501 GO:0032502 GO:0042659 GO:0044426 GO:0044462 GO:0044464 GO:0045595 GO:0048226 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0051302 GO:0061458 GO:0065001 GO:0065007 GO:0071944 GO:0090558 GO:0090708 GO:0099402 GO:1905392 GO:1905421 GO:2000026 GO:2000067 GO:2000280

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

688

Amino Acids

74.64

Weight (kDa)

7.43

Isoelectric Point (pI)

31.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	26 - 66	3.5e-09	Leucine rich repeat N-terminal domain
LRR_8	PF13855	142 - 201	8.8e-07	Leucine rich repeat
Pkinase	PF00069	418 - 680	1.8e-26	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	421 - 682	1.3e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G22730 AT4G22730
fragaria_vesca	FvH4_5g00660 FvH4_5g00660 FvH4_5g00660 FvH4_5g00660
malus_domestica	MD04G1079600.v1.1
prunus_persica	Prupe.5G079400_v2.0.a1
pyrus_communis	pycom04g07170
rosa_chinensis	RchiOBHm_Chr7g0201601
rosa_laevigata	RLG00000003662
rosa_multiflora	Rmu_ssc0000304.1_g000002
rosa_roxburghii	Rroxscaffold_3G00255210
rosa_rugosa	Rorug07G0065100
rosa_samantha	Rh7AG191600 Rh7BG193900 Rh7CG203000 Rh7DG196900
rosa_wichuraiana	Rw7G016800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	306
AccBSI	CCGCTC	1 cut(s)	800
AccI	GTMKAC	5 cut(s)	397, 634, 923, 1293, 1923
AccII	CGCG	1 cut(s)	64
AccIII	TCCGGA	1 cut(s)	677
AciI	CCGC	6 cut(s)	62, 263, 747, 800, 935, 1009
AclWI	GGATC	5 cut(s)	155, 1043, 1139, 1152, 2029
AcoI	YGGCCR	3 cut(s)	267, 1060, 1152
AcsI	RAATTY	4 cut(s)	929, 1280, 1373, 1916
AcuI	CTGAAG	3 cut(s)	125, 1766, 1977
AfaI	GTAC	6 cut(s)	134, 296, 610, 850, 1130, 1247
AfiI	CCNNNNNNNGG	4 cut(s)	170, 276, 495, 1058
AgsI	TTSAA	8 cut(s)	182, 431, 493, 595, 700, 1216, 1655, 1881
AhlI	ACTAGT	1 cut(s)	1984
AjnI	CCWGG	2 cut(s)	1188, 2037
AleI	CACNNNNGTG	1 cut(s)	1608
Alw21I	GWGCWC	5 cut(s)	42, 87, 94, 346, 1994
Alw26I	GTCTC	2 cut(s)	691, 1879
Alw44I	GTGCAC	1 cut(s)	1990
AlwI	GGATC	5 cut(s)	155, 1043, 1139, 1152, 2029
AlwNI	CAGNNNCTG	2 cut(s)	1955, 2044
Aor13HI	TCCGGA	1 cut(s)	677
AoxI	GGCC	8 cut(s)	108, 267, 1060, 1080, 1152, 1168, 1702, 2015
ApaLI	GTGCAC	1 cut(s)	1990
ApoI	RAATTY	4 cut(s)	929, 1280, 1373, 1916
AseI	ATTAAT	1 cut(s)	1341
Asp700I	GAANNNNTTC	3 cut(s)	667, 1436, 1659
AspS9I	GGNCC	3 cut(s)	486, 824, 1551
AsuC2I	CCSGG	2 cut(s)	271, 872
AsuHPI	GGTGA	4 cut(s)	170, 1270, 1472, 1780
AsuNHI	GCTAGC	2 cut(s)	625, 1717
AvaII	GGWCC	3 cut(s)	486, 824, 1551
BaeGI	GKGCMC	1 cut(s)	1994
BalI	TGGCCA	1 cut(s)	1062
BamHI	GGATCC	1 cut(s)	1144
BanII	GRGCYC	3 cut(s)	87, 276, 346
BbsI	GAAGAC	2 cut(s)	1726, 1754
Bbv12I	GWGCWC	5 cut(s)	42, 87, 94, 346, 1994
BccI	CCATC	8 cut(s)	475, 646, 803, 1052, 1151, 1307, 1520, 1574
BciT130I	CCWGG	2 cut(s)	1190, 2039
BciVI	GTATCC	2 cut(s)	1589, 1760
BclI	TGATCA	2 cut(s)	1075, 1669
BcnI	CCSGG	2 cut(s)	271, 872
BcoDI	GTCTC	2 cut(s)	691, 1879
BcuI	ACTAGT	1 cut(s)	1984
BfaI	CTAG	6 cut(s)	626, 630, 1449, 1718, 1772, 1985
BfmI	CTRYAG	4 cut(s)	98, 1093, 1606, 1893
BfuI	GTATCC	2 cut(s)	1589, 1760
BlpI	GCTNAGC	2 cut(s)	1067, 2045
BmcAI	AGTACT	3 cut(s)	134, 1130, 1247
Bme1390I	CCNGG	4 cut(s)	271, 872, 1190, 2039
Bme18I	GGWCC	3 cut(s)	486, 824, 1551
BmgT120I	GGNCC	3 cut(s)	486, 824, 1551
BmiI	GGNNCC	3 cut(s)	275, 487, 1146
BmrFI	CCNGG	4 cut(s)	271, 872, 1190, 2039
BmrI	ACTGGG	2 cut(s)	360, 1979
BmsI	GCATC	2 cut(s)	558, 2011
BmtI	GCTAGC	2 cut(s)	629, 1721
BmuI	ACTGGG	2 cut(s)	360, 1979
BpiI	GAAGAC	2 cut(s)	1726, 1754
Bpu10I	CCTNAGC	1 cut(s)	1710
Bpu1102I	GCTNAGC	2 cut(s)	1067, 2045
BpuEI	CTTGAG	2 cut(s)	157, 1145
BpuMI	CCSGG	2 cut(s)	271, 872
Bsa29I	ATCGAT	1 cut(s)	1524
BsaBI	GATNNNNATC	1 cut(s)	366
BsaI	GGTCTC	1 cut(s)	691
BsaJI	CCNNGG	4 cut(s)	1083, 1171, 1188, 1254
BsaWI	WCCGGW	3 cut(s)	276, 287, 677
BsaXI	ACNNNNNCTCC	4 cut(s)	841, 871, 1824, 1854
Bsc4I	CCNNNNNNNGG	4 cut(s)	170, 276, 495, 1058
Bse1I	ACTGG	5 cut(s)	355, 1553, 1798, 1893, 1974
Bse3DI	GCAATG	2 cut(s)	895, 1767
Bse8I	GATNNNNATC	1 cut(s)	366
BseAI	TCCGGA	1 cut(s)	677
BseBI	CCWGG	2 cut(s)	1190, 2039
BseCI	ATCGAT	1 cut(s)	1524
BseDI	CCNNGG	4 cut(s)	1083, 1171, 1188, 1254
BseGI	GGATG	3 cut(s)	573, 808, 2002
BseJI	GATNNNNATC	1 cut(s)	366
BseLI	CCNNNNNNNGG	4 cut(s)	170, 276, 495, 1058
BseMI	GCAATG	2 cut(s)	895, 1767
BseMII	CTCAG	6 cut(s)	758, 1298, 1353, 1797, 1962, 2036
BseNI	ACTGG	5 cut(s)	355, 1553, 1798, 1893, 1974
BseRI	GAGGAG	1 cut(s)	846
BseSI	GKGCMC	1 cut(s)	1994
BseYI	CCCAGC	1 cut(s)	983
BsgI	GTGCAG	2 cut(s)	1373, 1950
Bsh1236I	CGCG	1 cut(s)	64
BshFI	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1704, 2017
BshVI	ATCGAT	1 cut(s)	1524
BsiHKAI	GWGCWC	5 cut(s)	42, 87, 94, 346, 1994
BsiSI	CCGG	5 cut(s)	270, 277, 288, 678, 872
BslFI	GGGAC	2 cut(s)	1089, 1398
BslI	CCNNNNNNNGG	4 cut(s)	170, 276, 495, 1058
BsmAI	GTCTC	2 cut(s)	691, 1879
BsmFI	GGGAC	2 cut(s)	1089, 1398
BsmI	GAATGC	1 cut(s)	1469
BsnI	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1704, 2017
Bso31I	GGTCTC	1 cut(s)	691
Bsp1286I	GDGCHC	6 cut(s)	42, 87, 94, 276, 346, 1994
Bsp13I	TCCGGA	1 cut(s)	677
Bsp143I	GATC	8 cut(s)	160, 361, 583, 1048, 1075, 1144, 1669, 2034
Bsp1720I	GCTNAGC	2 cut(s)	1067, 2045
BspACI	CCGC	6 cut(s)	62, 263, 747, 800, 935, 1009
BspANI	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1704, 2017
BspCNI	CTCAG	6 cut(s)	759, 1299, 1354, 1798, 1961, 2037
BspDI	ATCGAT	1 cut(s)	1524
BspEI	TCCGGA	1 cut(s)	677
BspFNI	CGCG	1 cut(s)	64
BspHI	TCATGA	1 cut(s)	1411
BspLI	GGNNCC	3 cut(s)	275, 487, 1146
BspMAI	CTGCAG	3 cut(s)	102, 1610, 1897
BspOI	GCTAGC	2 cut(s)	629, 1721
BspPI	GGATC	5 cut(s)	155, 1043, 1139, 1152, 2029
BspQI	GCTCTTC	1 cut(s)	1268
BspTNI	GGTCTC	1 cut(s)	691
BsrBI	CCGCTC	1 cut(s)	800
BsrDI	GCAATG	2 cut(s)	895, 1767
BsrI	ACTGG	5 cut(s)	355, 1553, 1798, 1893, 1974
BssECI	CCNNGG	4 cut(s)	1083, 1171, 1188, 1254
BssMI	GATC	8 cut(s)	160, 361, 583, 1048, 1075, 1144, 1669, 2034
BssNAI	GTATAC	2 cut(s)	398, 635
BssT1I	CCWWGG	2 cut(s)	1083, 1171
Bst1107I	GTATAC	2 cut(s)	398, 635
Bst2UI	CCWGG	2 cut(s)	1190, 2039
Bst4CI	ACNGT	3 cut(s)	844, 1245, 2032
Bst6I	CTCTTC	3 cut(s)	488, 1268, 1291
BstC8I	GCNNGC	5 cut(s)	550, 627, 939, 1064, 1719
BstENI	CCTNNNNNAGG	1 cut(s)	493
BstF5I	GGATG	3 cut(s)	573, 808, 2002
BstFNI	CGCG	1 cut(s)	64
BstKTI	GATC	8 cut(s)	163, 364, 586, 1051, 1078, 1147, 1672, 2037
BstMAI	GTCTC	2 cut(s)	691, 1879
BstMBI	GATC	8 cut(s)	160, 361, 583, 1048, 1075, 1144, 1669, 2034
BstMWI	GCNNNNNNNGC	7 cut(s)	577, 626, 950, 1068, 1452, 1681, 2023
BstNI	CCWGG	2 cut(s)	1190, 2039
BstSCI	CCNGG	4 cut(s)	269, 870, 1188, 2037
BstSFI	CTRYAG	4 cut(s)	98, 1093, 1606, 1893
BstSLI	GKGCMC	1 cut(s)	1994
BstUI	CGCG	1 cut(s)	64
BstV2I	GAAGAC	2 cut(s)	1726, 1754
BstX2I	RGATCY	1 cut(s)	1144
BstXI	CCANNNNNNTGG	2 cut(s)	410, 461
BstYI	RGATCY	1 cut(s)	1144
BstZ17I	GTATAC	2 cut(s)	398, 635
Bsu15I	ATCGAT	1 cut(s)	1524
BsuI	GTATCC	2 cut(s)	1589, 1760
BsuRI	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1704, 2017
BsuTUI	ATCGAT	1 cut(s)	1524
BtsCI	GGATG	3 cut(s)	573, 808, 2002
BtsI	GCAGTG	3 cut(s)	92, 1603, 1615
Cac8I	GCNNGC	5 cut(s)	550, 627, 939, 1064, 1719
CaiI	CAGNNNCTG	2 cut(s)	1955, 2044
CciI	TCATGA	1 cut(s)	1411
Cfr13I	GGNCC	3 cut(s)	486, 824, 1551
ClaI	ATCGAT	1 cut(s)	1524
Csp6I	GTAC	6 cut(s)	133, 295, 609, 849, 1129, 1246
CviAII	CATG	7 cut(s)	155, 1140, 1219, 1412, 1630, 1902, 1997
CviQI	GTAC	6 cut(s)	133, 295, 609, 849, 1129, 1246
DpnI	GATC	8 cut(s)	162, 363, 585, 1050, 1077, 1146, 1671, 2036
DpnII	GATC	8 cut(s)	160, 361, 583, 1048, 1075, 1144, 1669, 2034
EaeI	YGGCCR	3 cut(s)	267, 1060, 1152
Eam1104I	CTCTTC	3 cut(s)	488, 1268, 1291
EarI	CTCTTC	3 cut(s)	488, 1268, 1291
Ecl136II	GAGCTC	2 cut(s)	85, 344
Eco130I	CCWWGG	2 cut(s)	1083, 1171
Eco147I	AGGCCT	1 cut(s)	110
Eco24I	GRGCYC	3 cut(s)	87, 276, 346
Eco31I	GGTCTC	1 cut(s)	691
Eco32I	GATATC	1 cut(s)	658
Eco47I	GGWCC	3 cut(s)	486, 824, 1551
Eco53kI	GAGCTC	2 cut(s)	85, 344
Eco57I	CTGAAG	3 cut(s)	125, 1766, 1977
EcoICRI	GAGCTC	2 cut(s)	85, 344
EcoNI	CCTNNNNNAGG	1 cut(s)	493
EcoO109I	RGGNCCY	1 cut(s)	486
EcoRII	CCWGG	2 cut(s)	1188, 2037
EcoRV	GATATC	1 cut(s)	658
EcoT14I	CCWWGG	2 cut(s)	1083, 1171
EcoT22I	ATGCAT	2 cut(s)	1141, 1828
EcoT38I	GRGCYC	3 cut(s)	87, 276, 346
ErhI	CCWWGG	2 cut(s)	1083, 1171
FaeI	CATG	7 cut(s)	158, 1143, 1222, 1415, 1633, 1905, 2000
FaqI	GGGAC	2 cut(s)	1089, 1398
FatI	CATG	7 cut(s)	154, 1139, 1218, 1411, 1629, 1901, 1996
FbaI	TGATCA	2 cut(s)	1075, 1669
FblI	GTMKAC	5 cut(s)	397, 634, 923, 1293, 1923
FokI	GGATG	3 cut(s)	580, 815, 1989
FriOI	GRGCYC	3 cut(s)	87, 276, 346
FspBI	CTAG	6 cut(s)	626, 630, 1449, 1718, 1772, 1985
GsaI	CCCAGC	1 cut(s)	987
HaeIII	GGCC	8 cut(s)	110, 269, 1062, 1082, 1154, 1170, 1704, 2017
HapII	CCGG	5 cut(s)	270, 277, 288, 678, 872
Hin1II	CATG	7 cut(s)	158, 1143, 1222, 1415, 1633, 1905, 2000
HincII	GTYRAC	3 cut(s)	889, 924, 1924
HindII	GTYRAC	3 cut(s)	889, 924, 1924
HindIII	AAGCTT	1 cut(s)	550
HpaII	CCGG	5 cut(s)	270, 277, 288, 678, 872
HphI	GGTGA	4 cut(s)	170, 1270, 1472, 1780
Hpy166II	GTNNAC	9 cut(s)	147, 398, 635, 889, 924, 1261, 1294, 1924, 1992
Hpy188III	TCNNGA	7 cut(s)	116, 678, 700, 1124, 1412, 1514, 1778
Hpy8I	GTNNAC	9 cut(s)	147, 398, 635, 889, 924, 1261, 1294, 1924, 1992
HpyAV	CCTTC	9 cut(s)	100, 119, 176, 229, 707, 1062, 1192, 1375, 1715
HpyCH4III	ACNGT	3 cut(s)	844, 1245, 2032
HpyF10VI	GCNNNNNNNGC	7 cut(s)	577, 626, 950, 1068, 1452, 1681, 2023
Hsp92II	CATG	7 cut(s)	158, 1143, 1222, 1415, 1633, 1905, 2000
Kpn2I	TCCGGA	1 cut(s)	677
Ksp22I	TGATCA	2 cut(s)	1075, 1669
Kzo9I	GATC	8 cut(s)	160, 361, 583, 1048, 1075, 1144, 1669, 2034
LguI	GCTCTTC	1 cut(s)	1268
LmnI	GCTCC	8 cut(s)	89, 279, 341, 465, 859, 1492, 1780, 2041
LweI	GCATC	2 cut(s)	558, 2011
MaeI	CTAG	6 cut(s)	626, 630, 1449, 1718, 1772, 1985
MaeIII	GTNAC	3 cut(s)	449, 973, 1345
MalI	GATC	8 cut(s)	162, 363, 585, 1050, 1077, 1146, 1671, 2036
MbiI	CCGCTC	1 cut(s)	800
MboI	GATC	8 cut(s)	160, 361, 583, 1048, 1075, 1144, 1669, 2034
MfeI	CAATTG	1 cut(s)	910
MflI	RGATCY	1 cut(s)	1144
MhlI	GDGCHC	6 cut(s)	42, 87, 94, 276, 346, 1994
MlsI	TGGCCA	1 cut(s)	1062
MluNI	TGGCCA	1 cut(s)	1062
MlyI	GAGTC	6 cut(s)	731, 884, 1129, 1241, 1691, 1842
MmeI	TCCRAC	1 cut(s)	733
Mox20I	TGGCCA	1 cut(s)	1062
Mph1103I	ATGCAT	2 cut(s)	1141, 1828
MroI	TCCGGA	1 cut(s)	677
MroXI	GAANNNNTTC	3 cut(s)	667, 1436, 1659
MscI	TGGCCA	1 cut(s)	1062
MseI	TTAA	7 cut(s)	500, 707, 833, 1332, 1341, 1571, 1680
MslI	CAYNNNNRTG	3 cut(s)	1343, 1608, 1880
Msp20I	TGGCCA	1 cut(s)	1062
MspA1I	CMGCKG	4 cut(s)	103, 457, 1353, 1964
MspI	CCGG	5 cut(s)	270, 277, 288, 678, 872
MspR9I	CCNGG	4 cut(s)	271, 872, 1190, 2039
MunI	CAATTG	1 cut(s)	910
Mva1269I	GAATGC	1 cut(s)	1469
MvaI	CCWGG	2 cut(s)	1190, 2039
MvnI	CGCG	1 cut(s)	64
MwoI	GCNNNNNNNGC	7 cut(s)	577, 626, 950, 1068, 1452, 1681, 2023
NciI	CCSGG	2 cut(s)	271, 872
NdeII	GATC	8 cut(s)	160, 361, 583, 1048, 1075, 1144, 1669, 2034
NheI	GCTAGC	2 cut(s)	625, 1717
NlaIII	CATG	7 cut(s)	158, 1143, 1222, 1415, 1633, 1905, 2000
NlaIV	GGNNCC	3 cut(s)	275, 487, 1146
NmuCI	GTSAC	2 cut(s)	973, 1345
NsiI	ATGCAT	2 cut(s)	1141, 1828
OliI	CACNNNNGTG	1 cut(s)	1608
PagI	TCATGA	1 cut(s)	1411
PceI	AGGCCT	1 cut(s)	110
PciSI	GCTCTTC	1 cut(s)	1268
PcsI	WCGNNNNNNNCGW	1 cut(s)	1521
PctI	GAATGC	1 cut(s)	1469
PdmI	GAANNNNTTC	3 cut(s)	667, 1436, 1659
PfeI	GAWTC	7 cut(s)	10, 325, 541, 1534, 1633, 1861, 1898
PflFI	GACNNNGTC	1 cut(s)	1730
PfoI	TCCNGGA	1 cut(s)	2037
PleI	GAGTC	6 cut(s)	730, 883, 1128, 1240, 1691, 1841
PpsI	GAGTC	6 cut(s)	730, 883, 1128, 1240, 1691, 1841
PpuMI	RGGWCCY	1 cut(s)	486
PshBI	ATTAAT	1 cut(s)	1341
PsiI	TTATAA	1 cut(s)	306
Psp124BI	GAGCTC	2 cut(s)	87, 346
Psp5II	RGGWCCY	1 cut(s)	486
Psp6I	CCWGG	2 cut(s)	1188, 2037
PspFI	CCCAGC	1 cut(s)	983
PspGI	CCWGG	2 cut(s)	1188, 2037
PspN4I	GGNNCC	3 cut(s)	275, 487, 1146
PspPI	GGNCC	3 cut(s)	486, 824, 1551
PspPPI	RGGWCCY	1 cut(s)	486
PsrI	GAACNNNNNNTAC	2 cut(s)	832, 864
PstI	CTGCAG	3 cut(s)	102, 1610, 1897
PstNI	CAGNNNCTG	2 cut(s)	1955, 2044
PsuI	RGATCY	1 cut(s)	1144
PsyI	GACNNNGTC	1 cut(s)	1730
PvuII	CAGCTG	4 cut(s)	103, 457, 1353, 1964
RsaI	GTAC	6 cut(s)	134, 296, 610, 850, 1130, 1247
RsaNI	GTAC	6 cut(s)	133, 295, 609, 849, 1129, 1246
RseI	CAYNNNNRTG	3 cut(s)	1343, 1608, 1880
SacI	GAGCTC	2 cut(s)	87, 346
SalI	GTCGAC	2 cut(s)	922, 1922
SapI	GCTCTTC	1 cut(s)	1268
SaqAI	TTAA	7 cut(s)	500, 707, 833, 1332, 1341, 1571, 1680
Sau3AI	GATC	8 cut(s)	160, 361, 583, 1048, 1075, 1144, 1669, 2034
Sau96I	GGNCC	3 cut(s)	486, 824, 1551
ScaI	AGTACT	3 cut(s)	134, 1130, 1247
SchI	GAGTC	6 cut(s)	731, 884, 1129, 1241, 1691, 1842
ScrFI	CCNGG	4 cut(s)	271, 872, 1190, 2039
SduI	GDGCHC	6 cut(s)	42, 87, 94, 276, 346, 1994
SfaNI	GCATC	2 cut(s)	558, 2011
SfcI	CTRYAG	4 cut(s)	98, 1093, 1606, 1893
SinI	GGWCC	3 cut(s)	486, 824, 1551
SmiMI	CAYNNNNRTG	3 cut(s)	1343, 1608, 1880
SmlI	CTYRAG	2 cut(s)	136, 1124
SmoI	CTYRAG	2 cut(s)	136, 1124
SpeI	ACTAGT	1 cut(s)	1984
SseBI	AGGCCT	1 cut(s)	110
SsiI	CCGC	6 cut(s)	62, 263, 747, 800, 935, 1009
SspMI	CTAG	6 cut(s)	626, 630, 1449, 1718, 1772, 1985
SstI	GAGCTC	2 cut(s)	87, 346
StuI	AGGCCT	1 cut(s)	110
StyD4I	CCNGG	4 cut(s)	269, 870, 1188, 2037
StyI	CCWWGG	2 cut(s)	1083, 1171
TaaI	ACNGT	3 cut(s)	844, 1245, 2032
TaqI	TCGA	6 cut(s)	8, 807, 923, 1515, 1524, 1923
TatI	WGTACW	4 cut(s)	132, 294, 1128, 1245
TfiI	GAWTC	7 cut(s)	10, 325, 541, 1534, 1633, 1861, 1898
Tru1I	TTAA	7 cut(s)	500, 707, 833, 1332, 1341, 1571, 1680
Tru9I	TTAA	7 cut(s)	500, 707, 833, 1332, 1341, 1571, 1680
TseFI	GTSAC	2 cut(s)	973, 1345
Tsp45I	GTSAC	2 cut(s)	973, 1345
TspDTI	ATGAA	4 cut(s)	726, 1428, 1625, 1926
TspGWI	ACGGA	3 cut(s)	153, 806, 1137
Tth111I	GACNNNGTC	1 cut(s)	1730
VneI	GTGCAC	1 cut(s)	1990
VpaK11BI	GGWCC	3 cut(s)	486, 824, 1551
VspI	ATTAAT	1 cut(s)	1341
XagI	CCTNNNNNAGG	1 cut(s)	493
XapI	RAATTY	4 cut(s)	929, 1280, 1373, 1916
XcmI	CCANNNNNNNNNTGG	1 cut(s)	66
XmiI	GTMKAC	5 cut(s)	397, 634, 923, 1293, 1923
XmnI	GAANNNNTTC	3 cut(s)	667, 1436, 1659
XspI	CTAG	6 cut(s)	626, 630, 1449, 1718, 1772, 1985
ZrmI	AGTACT	3 cut(s)	134, 1130, 1247
Zsp2I	ATGCAT	2 cut(s)	1141, 1828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.