Rmu_ssc0000419.1_g000001

Hydroxyacylglutathione hydrolase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000419.1
Physical Location & Seq
Reverse (-)
1 .. 809
809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000419.1_g000001.1.cds

Sequence Viewer

Length: 332 bp
atgaaaatccatcacgttgcttgcttggaagacaattacgcatacctaattattgacgagagcaccaaagaagccgcggttgtggatcctgttgaacccgaaaaggttcttaaagcagcccaagaccacggtgcccaagtcaaactcgtcctcaccactcaccaccattgggatcatgccggaggaaatgagaagataaagcagttggtgcctggcattaaagtctatgggggttctgttgataatgtgaagggctgcactgataaggtggacaatggtgataagatttcgctcggagctgatactcaaatactctcgcttcacacaccttg
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

110

Amino Acids

11.93

Weight (kDa)

5.83

Isoelectric Point (pI)

14.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0023028)

Species Orthologous Gene IDs
rosa_multiflora Rmu_ssc0000419.1_g000001
rosa_samantha Rh1AG382500 Rh1CG359300 Rh1DG377100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 131, 208
AccII CGCG 1 cut(s) 77
AciI CCGC 2 cut(s) 75, 77
AclWI GGATC 3 cut(s) 80, 93, 180
AfiI CCNNNNNNNGG 1 cut(s) 169
AgsI TTSAA 1 cut(s) 95
AjnI CCWGG 1 cut(s) 211
AluBI AGCT 1 cut(s) 299
AluI AGCT 1 cut(s) 299
Alw21I GWGCWC 1 cut(s) 65
AlwI GGATC 3 cut(s) 80, 93, 180
ApeKI GCWGC 2 cut(s) 116, 255
Asp700I GAANNNNTTC 1 cut(s) 105
AsuHPI GGTGA 3 cut(s) 145, 152, 290
BaeGI GKGCMC 1 cut(s) 136
BamHI GGATCC 1 cut(s) 85
BanI GGYRCC 2 cut(s) 131, 208
BbsI GAAGAC 1 cut(s) 36
Bbv12I GWGCWC 1 cut(s) 65
BbvI GCAGC 2 cut(s) 128, 242
BccI CCATC 1 cut(s) 18
BciT130I CCWGG 1 cut(s) 213
BisI GCNGC 3 cut(s) 75, 117, 256
BlsI GCNGC 3 cut(s) 76, 118, 257
Bme1390I CCNGG 1 cut(s) 213
BmiI GGNNCC 3 cut(s) 87, 133, 210
BmrFI CCNGG 1 cut(s) 213
BpiI GAAGAC 1 cut(s) 36
BsaJI CCNNGG 2 cut(s) 75, 127
Bsc4I CCNNNNNNNGG 1 cut(s) 169
BseBI CCWGG 1 cut(s) 213
BseDI CCNNGG 2 cut(s) 75, 127
BseLI CCNNNNNNNGG 1 cut(s) 169
BseSI GKGCMC 1 cut(s) 136
BseXI GCAGC 2 cut(s) 128, 242
BsgI GTGCAG 1 cut(s) 241
Bsh1236I CGCG 1 cut(s) 77
BshNI GGYRCC 2 cut(s) 131, 208
BsiHKAI GWGCWC 1 cut(s) 65
BsiSI CCGG 1 cut(s) 180
BslI CCNNNNNNNGG 1 cut(s) 169
Bsp1286I GDGCHC 2 cut(s) 65, 136
Bsp143I GATC 2 cut(s) 85, 172
BspACI CCGC 2 cut(s) 75, 77
BspFNI CGCG 1 cut(s) 77
BspLI GGNNCC 3 cut(s) 87, 133, 210
BspPI GGATC 3 cut(s) 80, 93, 180
BspT107I GGYRCC 2 cut(s) 131, 208
BssECI CCNNGG 2 cut(s) 75, 127
BssMI GATC 2 cut(s) 85, 172
Bst2UI CCWGG 1 cut(s) 213
Bst4CI ACNGT 1 cut(s) 131
BstAPI GCANNNNNTGC 1 cut(s) 208
BstC8I GCNNGC 1 cut(s) 22
BstDSI CCRYGG 2 cut(s) 75, 127
BstFNI CGCG 1 cut(s) 77
BstKTI GATC 2 cut(s) 88, 175
BstMBI GATC 2 cut(s) 85, 172
BstMWI GCNNNNNNNGC 1 cut(s) 208
BstNI CCWGG 1 cut(s) 213
BstSCI CCNGG 1 cut(s) 211
BstSLI GKGCMC 1 cut(s) 136
BstUI CGCG 1 cut(s) 77
BstV1I GCAGC 2 cut(s) 128, 242
BstV2I GAAGAC 1 cut(s) 36
BstX2I RGATCY 1 cut(s) 85
BstYI RGATCY 1 cut(s) 85
BtgI CCRYGG 2 cut(s) 75, 127
BtsIMutI CAGTG 1 cut(s) 258
Cac8I GCNNGC 1 cut(s) 22
Cfr42I CCGCGG 1 cut(s) 78
CviAII CATG 1 cut(s) 176
CviJI RGCY 4 cut(s) 74, 119, 255, 299
CviKI_1 RGCY 4 cut(s) 74, 119, 255, 299
DpnI GATC 2 cut(s) 87, 174
DpnII GATC 2 cut(s) 85, 172
EcoRII CCWGG 1 cut(s) 211
FaeI CATG 1 cut(s) 179
FaiI YATR 3 cut(s) 43, 177, 228
FatI CATG 1 cut(s) 175
Fnu4HI GCNGC 3 cut(s) 75, 117, 256
Fsp4HI GCNGC 3 cut(s) 75, 117, 256
GluI GCNGC 3 cut(s) 75, 117, 256
HapII CCGG 1 cut(s) 180
Hin1II CATG 1 cut(s) 179
HpaII CCGG 1 cut(s) 180
HphI GGTGA 3 cut(s) 145, 152, 290
Hpy166II GTNNAC 1 cut(s) 271
Hpy188I TCNGA 1 cut(s) 296
Hpy8I GTNNAC 1 cut(s) 271
HpyAV CCTTC 1 cut(s) 244
HpyCH4III ACNGT 1 cut(s) 131
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 1 cut(s) 258
HpyF10VI GCNNNNNNNGC 1 cut(s) 208
HpySE526I ACGT 1 cut(s) 15
Hsp92II CATG 1 cut(s) 179
KspI CCGCGG 1 cut(s) 78
Kzo9I GATC 2 cut(s) 85, 172
LmnI GCTCC 1 cut(s) 296
LpnPI CCDG 4 cut(s) 102, 193, 198, 225
Lsp1109I GCAGC 2 cut(s) 128, 242
MaeII ACGT 1 cut(s) 15
MalI GATC 2 cut(s) 87, 174
MboI GATC 2 cut(s) 85, 172
MboII GAAGA 2 cut(s) 41, 205
MflI RGATCY 1 cut(s) 85
MhlI GDGCHC 2 cut(s) 65, 136
MluCI AATT 2 cut(s) 34, 48
MnlI CCTC 2 cut(s) 161, 176
MroXI GAANNNNTTC 1 cut(s) 105
MseI TTAA 2 cut(s) 111, 219
MspA1I CMGCKG 1 cut(s) 77
MspI CCGG 1 cut(s) 180
MspR9I CCNGG 1 cut(s) 213
MvaI CCWGG 1 cut(s) 213
MvnI CGCG 1 cut(s) 77
MwoI GCNNNNNNNGC 1 cut(s) 208
NdeII GATC 2 cut(s) 85, 172
NlaIII CATG 1 cut(s) 179
NlaIV GGNNCC 3 cut(s) 87, 133, 210
PdmI GAANNNNTTC 1 cut(s) 105
PkrI GCNGC 3 cut(s) 76, 118, 257
Psp6I CCWGG 1 cut(s) 211
PspGI CCWGG 1 cut(s) 211
PspN4I GGNNCC 3 cut(s) 87, 133, 210
PsuI RGATCY 1 cut(s) 85
SacII CCGCGG 1 cut(s) 78
SaqAI TTAA 2 cut(s) 111, 219
SatI GCNGC 3 cut(s) 75, 117, 256
Sau3AI GATC 2 cut(s) 85, 172
ScrFI CCNGG 1 cut(s) 213
SduI GDGCHC 2 cut(s) 65, 136
SetI ASST 6 cut(s) 18, 48, 108, 270, 301, 331
Sfr303I CCGCGG 1 cut(s) 78
SgrBI CCGCGG 1 cut(s) 78
Sse9I AATT 2 cut(s) 34, 48
SsiI CCGC 2 cut(s) 75, 77
StyD4I CCNGG 1 cut(s) 211
TaaI ACNGT 1 cut(s) 131
TaiI ACGT 1 cut(s) 18
TasI AATT 2 cut(s) 34, 48
TauI GCSGC 1 cut(s) 77
Tru1I TTAA 2 cut(s) 111, 219
Tru9I TTAA 2 cut(s) 111, 219
TscAI CASTG 1 cut(s) 265
TseI GCWGC 2 cut(s) 116, 255
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 1 cut(s) 265
XmnI GAANNNNTTC 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.