Rroxscaffold_1G00024480

Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
30397561 .. 30399051
1491 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_1G00024480.1

Sequence Viewer

Length: 156 bp
ATGTTTTCTATGCATTCTGATCAGAACATTCTGATCAATGTTTTCTTTTCGGACCAGAGACTCCCCCATCACCGCGAGCCCAAGGAATTTGTATTGCTGGACCAACTTGCTGCGGGCAGCAAAGACTCGGAAAAGATACACCCAAGAACAATTTGA

Protein Analysis

51

Amino Acids

5.97

Weight (kDa)

6.38

Isoelectric Point (pI)

47.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 75
AciI CCGC 2 cut(s) 73, 113
AcsI RAATTY 1 cut(s) 86
Alw26I GTCTC 1 cut(s) 52
ApeKI GCWGC 2 cut(s) 110, 117
ApoI RAATTY 1 cut(s) 86
AspS9I GGNCC 2 cut(s) 52, 100
AsuHPI GGTGA 1 cut(s) 62
AvaII GGWCC 2 cut(s) 52, 100
BanII GRGCYC 1 cut(s) 81
BbvI GCAGC 2 cut(s) 97, 129
BccI CCATC 1 cut(s) 75
BclI TGATCA 2 cut(s) 19, 33
BcoDI GTCTC 1 cut(s) 52
BisI GCNGC 2 cut(s) 111, 118
BlsI GCNGC 2 cut(s) 112, 119
Bme18I GGWCC 2 cut(s) 52, 100
BmgT120I GGNCC 2 cut(s) 52, 100
BsaJI CCNNGG 1 cut(s) 81
BseDI CCNNGG 1 cut(s) 81
BseXI GCAGC 2 cut(s) 97, 129
Bsh1236I CGCG 1 cut(s) 75
BsmAI GTCTC 1 cut(s) 52
BsmI GAATGC 1 cut(s) 13
Bsp1286I GDGCHC 1 cut(s) 81
Bsp143I GATC 2 cut(s) 19, 33
BspACI CCGC 2 cut(s) 73, 113
BspFNI CGCG 1 cut(s) 75
BssECI CCNNGG 1 cut(s) 81
BssMI GATC 2 cut(s) 19, 33
BssT1I CCWWGG 1 cut(s) 81
BstC8I GCNNGC 2 cut(s) 77, 115
BstFNI CGCG 1 cut(s) 75
BstKTI GATC 2 cut(s) 22, 36
BstMAI GTCTC 1 cut(s) 52
BstMBI GATC 2 cut(s) 19, 33
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 2 cut(s) 97, 129
Cac8I GCNNGC 2 cut(s) 77, 115
Cfr13I GGNCC 2 cut(s) 52, 100
CviJI RGCY 1 cut(s) 79
CviKI_1 RGCY 1 cut(s) 79
DpnI GATC 2 cut(s) 21, 35
DpnII GATC 2 cut(s) 19, 33
Eco130I CCWWGG 1 cut(s) 81
Eco24I GRGCYC 1 cut(s) 81
Eco47I GGWCC 2 cut(s) 52, 100
EcoT14I CCWWGG 1 cut(s) 81
EcoT22I ATGCAT 1 cut(s) 15
EcoT38I GRGCYC 1 cut(s) 81
ErhI CCWWGG 1 cut(s) 81
FaiI YATR 1 cut(s) 11
FauI CCCGC 1 cut(s) 106
FbaI TGATCA 2 cut(s) 19, 33
Fnu4HI GCNGC 2 cut(s) 111, 118
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 2 cut(s) 111, 118
GluI GCNGC 2 cut(s) 111, 118
HinfI GANTC 2 cut(s) 60, 125
HphI GGTGA 1 cut(s) 62
Hpy188I TCNGA 5 cut(s) 19, 24, 33, 52, 130
HpyCH4V TGCA 1 cut(s) 13
Ksp22I TGATCA 2 cut(s) 19, 33
Kzo9I GATC 2 cut(s) 19, 33
LpnPI CCDG 2 cut(s) 68, 83
Lsp1109I GCAGC 2 cut(s) 97, 129
MalI GATC 2 cut(s) 21, 35
MboI GATC 2 cut(s) 19, 33
MhlI GDGCHC 1 cut(s) 81
MluCI AATT 2 cut(s) 86, 150
MlyI GAGTC 2 cut(s) 54, 119
Mph1103I ATGCAT 1 cut(s) 15
Mva1269I GAATGC 1 cut(s) 13
MvnI CGCG 1 cut(s) 75
NdeII GATC 2 cut(s) 19, 33
NsiI ATGCAT 1 cut(s) 15
PctI GAATGC 1 cut(s) 13
PkrI GCNGC 2 cut(s) 112, 119
PleI GAGTC 2 cut(s) 54, 119
PpsI GAGTC 2 cut(s) 54, 119
PspPI GGNCC 2 cut(s) 52, 100
SatI GCNGC 2 cut(s) 111, 118
Sau3AI GATC 2 cut(s) 19, 33
Sau96I GGNCC 2 cut(s) 52, 100
SchI GAGTC 2 cut(s) 54, 119
SduI GDGCHC 1 cut(s) 81
SgeI CNNG 8 cut(s) 67, 86, 88, 94, 110, 119, 126, 139
SinI GGWCC 2 cut(s) 52, 100
Sse9I AATT 2 cut(s) 86, 150
SsiI CCGC 2 cut(s) 73, 113
StyI CCWWGG 1 cut(s) 81
TasI AATT 2 cut(s) 86, 150
TseI GCWGC 2 cut(s) 110, 117
VpaK11BI GGWCC 2 cut(s) 52, 100
XapI RAATTY 1 cut(s) 86
Zsp2I ATGCAT 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.