peroxisome matrix targeting signal-2 binding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54510 |
| rosa_multiflora | Rmu_sc0003743.1_g000015 |
| rosa_roxburghii | Rroxscaffold_1G00030740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 39 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 401 |
| AatII | GACGTC | 1 cut(s) | 450 |
| Acc36I | ACCTGC | 1 cut(s) | 39 |
| AccI | GTMKAC | 1 cut(s) | 423 |
| AccII | CGCG | 2 cut(s) | 308, 402 |
| AciI | CCGC | 7 cut(s) | 36, 241, 250, 300, 400, 414, 522 |
| AclWI | GGATC | 4 cut(s) | 326, 360, 447, 460 |
| AcoI | YGGCCR | 1 cut(s) | 484 |
| AcsI | RAATTY | 1 cut(s) | 513 |
| AcyI | GRCGYC | 1 cut(s) | 447 |
| AfaI | GTAC | 4 cut(s) | 298, 392, 557, 572 |
| AflIII | ACRYGT | 1 cut(s) | 306 |
| AgsI | TTSAA | 4 cut(s) | 81, 259, 385, 587 |
| AjiI | CACGTC | 1 cut(s) | 318 |
| AjnI | CCWGG | 3 cut(s) | 59, 72, 85 |
| AluBI | AGCT | 6 cut(s) | 66, 114, 146, 150, 464, 537 |
| AluI | AGCT | 6 cut(s) | 66, 114, 146, 150, 464, 537 |
| Alw21I | GWGCWC | 5 cut(s) | 267, 356, 466, 479, 554 |
| Alw26I | GTCTC | 1 cut(s) | 315 |
| Alw44I | GTGCAC | 1 cut(s) | 352 |
| AlwI | GGATC | 4 cut(s) | 326, 360, 447, 460 |
| AoxI | GGCC | 1 cut(s) | 484 |
| ApaLI | GTGCAC | 1 cut(s) | 352 |
| ApoI | RAATTY | 1 cut(s) | 513 |
| AsuC2I | CCSGG | 1 cut(s) | 349 |
| AsuNHI | GCTAGC | 1 cut(s) | 146 |
| BaeGI | GKGCMC | 1 cut(s) | 356 |
| BamHI | GGATCC | 1 cut(s) | 452 |
| BanII | GRGCYC | 1 cut(s) | 466 |
| BauI | CACGAG | 1 cut(s) | 355 |
| Bbv12I | GWGCWC | 5 cut(s) | 267, 356, 466, 479, 554 |
| BccI | CCATC | 3 cut(s) | 97, 346, 464 |
| BceAI | ACGGC | 1 cut(s) | 179 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 456, 490 |
| BciT130I | CCWGG | 3 cut(s) | 61, 74, 87 |
| BcnI | CCSGG | 1 cut(s) | 349 |
| BcoDI | GTCTC | 1 cut(s) | 315 |
| BfaI | CTAG | 4 cut(s) | 26, 147, 329, 598 |
| BfuAI | ACCTGC | 1 cut(s) | 39 |
| BisI | GCNGC | 1 cut(s) | 522 |
| BlsI | GCNGC | 1 cut(s) | 523 |
| Bme1390I | CCNGG | 4 cut(s) | 61, 74, 87, 349 |
| BmgBI | CACGTC | 1 cut(s) | 318 |
| BmiI | GGNNCC | 2 cut(s) | 135, 454 |
| BmrFI | CCNGG | 4 cut(s) | 61, 74, 87, 349 |
| BmtI | GCTAGC | 1 cut(s) | 150 |
| BpmI | CTGGAG | 1 cut(s) | 108 |
| BpuEI | CTTGAG | 1 cut(s) | 88 |
| BpuMI | CCSGG | 1 cut(s) | 349 |
| Bsa29I | ATCGAT | 1 cut(s) | 431 |
| BsaHI | GRCGYC | 1 cut(s) | 447 |
| BsaJI | CCNNGG | 2 cut(s) | 59, 161 |
| Bse118I | RCCGGY | 1 cut(s) | 482 |
| BseBI | CCWGG | 3 cut(s) | 61, 74, 87 |
| BseCI | ATCGAT | 1 cut(s) | 431 |
| BseDI | CCNNGG | 2 cut(s) | 59, 161 |
| BseGI | GGATG | 1 cut(s) | 344 |
| BseSI | GKGCMC | 1 cut(s) | 356 |
| Bsh1236I | CGCG | 2 cut(s) | 308, 402 |
| Bsh1285I | CGRYCG | 1 cut(s) | 483 |
| BshFI | GGCC | 1 cut(s) | 486 |
| BshVI | ATCGAT | 1 cut(s) | 431 |
| BsiEI | CGRYCG | 1 cut(s) | 483 |
| BsiHKAI | GWGCWC | 5 cut(s) | 267, 356, 466, 479, 554 |
| BsiSI | CCGG | 3 cut(s) | 289, 349, 483 |
| BsiWI | CGTACG | 1 cut(s) | 555 |
| BslFI | GGGAC | 1 cut(s) | 458 |
| BsmAI | GTCTC | 1 cut(s) | 315 |
| BsmBI | CGTCTC | 1 cut(s) | 315 |
| BsmFI | GGGAC | 1 cut(s) | 458 |
| BsnI | GGCC | 1 cut(s) | 486 |
| Bsp1286I | GDGCHC | 5 cut(s) | 267, 356, 466, 479, 554 |
| Bsp143I | GATC | 4 cut(s) | 331, 365, 432, 452 |
| BspACI | CCGC | 7 cut(s) | 36, 241, 250, 300, 400, 414, 522 |
| BspANI | GGCC | 1 cut(s) | 486 |
| BspDI | ATCGAT | 1 cut(s) | 431 |
| BspFNI | CGCG | 2 cut(s) | 308, 402 |
| BspLI | GGNNCC | 2 cut(s) | 135, 454 |
| BspMI | ACCTGC | 1 cut(s) | 39 |
| BspOI | GCTAGC | 1 cut(s) | 150 |
| BspPI | GGATC | 4 cut(s) | 326, 360, 447, 460 |
| BsrFI | RCCGGY | 1 cut(s) | 482 |
| BssAI | RCCGGY | 1 cut(s) | 482 |
| BssECI | CCNNGG | 2 cut(s) | 59, 161 |
| BssMI | GATC | 4 cut(s) | 331, 365, 432, 452 |
| BssNI | GRCGYC | 1 cut(s) | 447 |
| BssSI | CACGAG | 1 cut(s) | 355 |
| Bst2BI | CACGAG | 1 cut(s) | 355 |
| Bst2UI | CCWGG | 3 cut(s) | 61, 74, 87 |
| Bst4CI | ACNGT | 2 cut(s) | 17, 439 |
| BstACI | GRCGYC | 1 cut(s) | 447 |
| BstC8I | GCNNGC | 1 cut(s) | 148 |
| BstDSI | CCRYGG | 1 cut(s) | 161 |
| BstF5I | GGATG | 1 cut(s) | 344 |
| BstFNI | CGCG | 2 cut(s) | 308, 402 |
| BstKTI | GATC | 4 cut(s) | 334, 368, 435, 455 |
| BstMAI | GTCTC | 1 cut(s) | 315 |
| BstMBI | GATC | 4 cut(s) | 331, 365, 432, 452 |
| BstMCI | CGRYCG | 1 cut(s) | 483 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 249, 483, 527 |
| BstNI | CCWGG | 3 cut(s) | 61, 74, 87 |
| BstSCI | CCNGG | 4 cut(s) | 59, 72, 85, 347 |
| BstSLI | GKGCMC | 1 cut(s) | 356 |
| BstUI | CGCG | 2 cut(s) | 308, 402 |
| BstX2I | RGATCY | 3 cut(s) | 331, 365, 452 |
| BstYI | RGATCY | 3 cut(s) | 331, 365, 452 |
| Bsu15I | ATCGAT | 1 cut(s) | 431 |
| BsuRI | GGCC | 1 cut(s) | 486 |
| BsuTUI | ATCGAT | 1 cut(s) | 431 |
| BtgI | CCRYGG | 1 cut(s) | 161 |
| BtgZI | GCGATG | 1 cut(s) | 391 |
| BtrI | CACGTC | 1 cut(s) | 318 |
| BtsCI | GGATG | 1 cut(s) | 344 |
| BveI | ACCTGC | 1 cut(s) | 39 |
| Cac8I | GCNNGC | 1 cut(s) | 148 |
| Cfr10I | RCCGGY | 1 cut(s) | 482 |
| ClaI | ATCGAT | 1 cut(s) | 431 |
| CseI | GACGC | 2 cut(s) | 297, 391 |
| Csp6I | GTAC | 4 cut(s) | 297, 391, 556, 571 |
| CviAII | CATG | 2 cut(s) | 130, 322 |
| CviQI | GTAC | 4 cut(s) | 297, 391, 556, 571 |
| DpnI | GATC | 4 cut(s) | 333, 367, 434, 454 |
| DpnII | GATC | 4 cut(s) | 331, 365, 432, 452 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 401 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 401 |
| EaeI | YGGCCR | 1 cut(s) | 484 |
| Ecl136II | GAGCTC | 1 cut(s) | 464 |
| Eco24I | GRGCYC | 1 cut(s) | 466 |
| Eco53kI | GAGCTC | 1 cut(s) | 464 |
| EcoICRI | GAGCTC | 1 cut(s) | 464 |
| EcoRII | CCWGG | 3 cut(s) | 59, 72, 85 |
| EcoT38I | GRGCYC | 1 cut(s) | 466 |
| Esp3I | CGTCTC | 1 cut(s) | 315 |
| FaeI | CATG | 2 cut(s) | 133, 325 |
| FaiI | YATR | 3 cut(s) | 33, 131, 323 |
| FaqI | GGGAC | 1 cut(s) | 458 |
| FatI | CATG | 2 cut(s) | 129, 321 |
| FauI | CCCGC | 1 cut(s) | 248 |
| FblI | GTMKAC | 1 cut(s) | 423 |
| Fnu4HI | GCNGC | 1 cut(s) | 522 |
| FokI | GGATG | 1 cut(s) | 331 |
| FriOI | GRGCYC | 1 cut(s) | 466 |
| Fsp4HI | GCNGC | 1 cut(s) | 522 |
| FspBI | CTAG | 4 cut(s) | 26, 147, 329, 598 |
| GluI | GCNGC | 1 cut(s) | 522 |
| GsuI | CTGGAG | 1 cut(s) | 108 |
| HaeIII | GGCC | 1 cut(s) | 486 |
| HapII | CCGG | 3 cut(s) | 289, 349, 483 |
| HgaI | GACGC | 2 cut(s) | 297, 391 |
| Hin1I | GRCGYC | 1 cut(s) | 447 |
| Hin1II | CATG | 2 cut(s) | 133, 325 |
| HincII | GTYRAC | 1 cut(s) | 424 |
| HindII | GTYRAC | 1 cut(s) | 424 |
| HindIII | AAGCTT | 1 cut(s) | 535 |
| HpaII | CCGG | 3 cut(s) | 289, 349, 483 |
| Hpy166II | GTNNAC | 2 cut(s) | 354, 424 |
| Hpy188I | TCNGA | 4 cut(s) | 198, 315, 452, 461 |
| Hpy188III | TCNNGA | 2 cut(s) | 206, 363 |
| Hpy8I | GTNNAC | 2 cut(s) | 354, 424 |
| Hpy99I | CGWCG | 3 cut(s) | 297, 425, 452 |
| HpyAV | CCTTC | 2 cut(s) | 265, 427 |
| HpyCH4III | ACNGT | 2 cut(s) | 17, 439 |
| HpyCH4IV | ACGT | 3 cut(s) | 295, 317, 447 |
| HpyCH4V | TGCA | 4 cut(s) | 31, 48, 321, 354 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 249, 483, 527 |
| HpySE526I | ACGT | 3 cut(s) | 295, 317, 447 |
| Hsp92I | GRCGYC | 1 cut(s) | 447 |
| Hsp92II | CATG | 2 cut(s) | 133, 325 |
| Kzo9I | GATC | 4 cut(s) | 331, 365, 432, 452 |
| LmnI | GCTCC | 4 cut(s) | 63, 262, 280, 461 |
| MaeI | CTAG | 4 cut(s) | 26, 147, 329, 598 |
| MaeII | ACGT | 3 cut(s) | 295, 317, 447 |
| MalI | GATC | 4 cut(s) | 333, 367, 434, 454 |
| MboI | GATC | 4 cut(s) | 331, 365, 432, 452 |
| MboII | GAAGA | 1 cut(s) | 14 |
| MflI | RGATCY | 3 cut(s) | 331, 365, 452 |
| MhlI | GDGCHC | 5 cut(s) | 267, 356, 466, 479, 554 |
| MluCI | AATT | 2 cut(s) | 98, 513 |
| MluI | ACGCGT | 1 cut(s) | 306 |
| MmeI | TCCRAC | 1 cut(s) | 430 |
| MnlI | CCTC | 5 cut(s) | 83, 186, 254, 296, 380 |
| MslI | CAYNNNNRTG | 1 cut(s) | 349 |
| MspI | CCGG | 3 cut(s) | 289, 349, 483 |
| MspR9I | CCNGG | 4 cut(s) | 61, 74, 87, 349 |
| MvaI | CCWGG | 3 cut(s) | 61, 74, 87 |
| MvnI | CGCG | 2 cut(s) | 308, 402 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 249, 483, 527 |
| NciI | CCSGG | 1 cut(s) | 349 |
| NdeII | GATC | 4 cut(s) | 331, 365, 432, 452 |
| NheI | GCTAGC | 1 cut(s) | 146 |
| NlaIII | CATG | 2 cut(s) | 133, 325 |
| NlaIV | GGNNCC | 2 cut(s) | 135, 454 |
| PaqCI | CACCTGC | 1 cut(s) | 39 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 289, 399 |
| Pfl23II | CGTACG | 1 cut(s) | 555 |
| PfoI | TCCNGGA | 1 cut(s) | 85 |
| PkrI | GCNGC | 1 cut(s) | 523 |
| Psp124BI | GAGCTC | 1 cut(s) | 466 |
| Psp6I | CCWGG | 3 cut(s) | 59, 72, 85 |
| PspGI | CCWGG | 3 cut(s) | 59, 72, 85 |
| PspLI | CGTACG | 1 cut(s) | 555 |
| PspN4I | GGNNCC | 2 cut(s) | 135, 454 |
| PsuI | RGATCY | 3 cut(s) | 331, 365, 452 |
| RsaI | GTAC | 4 cut(s) | 298, 392, 557, 572 |
| RsaNI | GTAC | 4 cut(s) | 297, 391, 556, 571 |
| RseI | CAYNNNNRTG | 1 cut(s) | 349 |
| SacI | GAGCTC | 1 cut(s) | 466 |
| SalI | GTCGAC | 1 cut(s) | 422 |
| SatI | GCNGC | 1 cut(s) | 522 |
| Sau3AI | GATC | 4 cut(s) | 331, 365, 432, 452 |
| ScrFI | CCNGG | 4 cut(s) | 61, 74, 87, 349 |
| SduI | GDGCHC | 5 cut(s) | 267, 356, 466, 479, 554 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 349 |
| SmlI | CTYRAG | 1 cut(s) | 67 |
| SmoI | CTYRAG | 1 cut(s) | 67 |
| Sse9I | AATT | 2 cut(s) | 98, 513 |
| SsiI | CCGC | 7 cut(s) | 36, 241, 250, 300, 400, 414, 522 |
| SspMI | CTAG | 4 cut(s) | 26, 147, 329, 598 |
| SstI | GAGCTC | 1 cut(s) | 466 |
| StyD4I | CCNGG | 4 cut(s) | 59, 72, 85, 347 |
| TaaI | ACNGT | 2 cut(s) | 17, 439 |
| TaiI | ACGT | 3 cut(s) | 298, 320, 450 |
| TaqI | TCGA | 6 cut(s) | 207, 362, 423, 431, 466, 479 |
| TasI | AATT | 2 cut(s) | 98, 513 |
| TauI | GCSGC | 1 cut(s) | 524 |
| VneI | GTGCAC | 1 cut(s) | 352 |
| XapI | RAATTY | 1 cut(s) | 513 |
| XmiI | GTMKAC | 1 cut(s) | 423 |
| XspI | CTAG | 4 cut(s) | 26, 147, 329, 598 |
| ZraI | GACGTC | 1 cut(s) | 448 |