DNA repair protein RAD50
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G180400_v2.0.a1 |
| rosa_multiflora | Rmu_sc0011519.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00040630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 433 |
| AccI | GTMKAC | 1 cut(s) | 236 |
| AciI | CCGC | 2 cut(s) | 406, 477 |
| AclWI | GGATC | 3 cut(s) | 179, 192, 282 |
| AcoI | YGGCCR | 1 cut(s) | 489 |
| AcsI | RAATTY | 2 cut(s) | 59, 444 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 50, 433 |
| AgsI | TTSAA | 3 cut(s) | 32, 323, 331 |
| AjnI | CCWGG | 1 cut(s) | 482 |
| AluBI | AGCT | 3 cut(s) | 72, 281, 304 |
| AluI | AGCT | 3 cut(s) | 72, 281, 304 |
| Alw26I | GTCTC | 1 cut(s) | 124 |
| AlwI | GGATC | 3 cut(s) | 179, 192, 282 |
| Ama87I | CYCGRG | 1 cut(s) | 67 |
| AoxI | GGCC | 3 cut(s) | 12, 173, 489 |
| ApeKI | GCWGC | 1 cut(s) | 338 |
| ApoI | RAATTY | 2 cut(s) | 59, 444 |
| AseI | ATTAAT | 1 cut(s) | 39 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| AvaI | CYCGRG | 1 cut(s) | 67 |
| BalI | TGGCCA | 1 cut(s) | 491 |
| BamHI | GGATCC | 1 cut(s) | 184 |
| BbvI | GCAGC | 1 cut(s) | 325 |
| BccI | CCATC | 3 cut(s) | 23, 106, 481 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 456, 490 |
| BciT130I | CCWGG | 1 cut(s) | 484 |
| BcoDI | GTCTC | 1 cut(s) | 124 |
| BfmI | CTRYAG | 1 cut(s) | 73 |
| BisI | GCNGC | 1 cut(s) | 339 |
| BlsI | GCNGC | 1 cut(s) | 340 |
| Bme1390I | CCNGG | 1 cut(s) | 484 |
| BmeT110I | CYCGRG | 1 cut(s) | 67 |
| BmiI | GGNNCC | 2 cut(s) | 186, 481 |
| BmrFI | CCNGG | 1 cut(s) | 484 |
| BmsI | GCATC | 3 cut(s) | 325, 393, 480 |
| BpuEI | CTTGAG | 1 cut(s) | 267 |
| BsaJI | CCNNGG | 1 cut(s) | 240 |
| BsaWI | WCCGGW | 1 cut(s) | 50 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 50, 433 |
| Bse3DI | GCAATG | 1 cut(s) | 360 |
| BseBI | CCWGG | 1 cut(s) | 484 |
| BseDI | CCNNGG | 1 cut(s) | 240 |
| BseGI | GGATG | 1 cut(s) | 492 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 50, 433 |
| BseMI | GCAATG | 1 cut(s) | 360 |
| BseXI | GCAGC | 1 cut(s) | 325 |
| BshFI | GGCC | 3 cut(s) | 14, 175, 491 |
| BsiHKCI | CYCGRG | 1 cut(s) | 67 |
| BsiSI | CCGG | 1 cut(s) | 51 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 50, 433 |
| BsmAI | GTCTC | 1 cut(s) | 124 |
| BsnI | GGCC | 3 cut(s) | 14, 175, 491 |
| BsoBI | CYCGRG | 1 cut(s) | 67 |
| Bsp143I | GATC | 4 cut(s) | 144, 184, 274, 430 |
| BspACI | CCGC | 2 cut(s) | 406, 477 |
| BspANI | GGCC | 3 cut(s) | 14, 175, 491 |
| BspLI | GGNNCC | 2 cut(s) | 186, 481 |
| BspPI | GGATC | 3 cut(s) | 179, 192, 282 |
| BsrDI | GCAATG | 1 cut(s) | 360 |
| BssECI | CCNNGG | 1 cut(s) | 240 |
| BssMI | GATC | 4 cut(s) | 144, 184, 274, 430 |
| BssNAI | GTATAC | 1 cut(s) | 237 |
| BssT1I | CCWWGG | 1 cut(s) | 240 |
| Bst1107I | GTATAC | 1 cut(s) | 237 |
| Bst2UI | CCWGG | 1 cut(s) | 484 |
| Bst4CI | ACNGT | 1 cut(s) | 234 |
| BstF5I | GGATG | 1 cut(s) | 492 |
| BstKTI | GATC | 4 cut(s) | 147, 187, 277, 433 |
| BstMAI | GTCTC | 1 cut(s) | 124 |
| BstMBI | GATC | 4 cut(s) | 144, 184, 274, 430 |
| BstNI | CCWGG | 1 cut(s) | 484 |
| BstSCI | CCNGG | 1 cut(s) | 482 |
| BstSFI | CTRYAG | 1 cut(s) | 73 |
| BstV1I | GCAGC | 1 cut(s) | 325 |
| BstX2I | RGATCY | 1 cut(s) | 184 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 247 |
| BstYI | RGATCY | 1 cut(s) | 184 |
| BstZ17I | GTATAC | 1 cut(s) | 237 |
| BsuRI | GGCC | 3 cut(s) | 14, 175, 491 |
| BtsCI | GGATG | 1 cut(s) | 492 |
| BtsI | GCAGTG | 1 cut(s) | 427 |
| BtsIMutI | CAGTG | 1 cut(s) | 427 |
| CseI | GACGC | 1 cut(s) | 13 |
| CviAII | CATG | 2 cut(s) | 88, 428 |
| CviJI | RGCY | 7 cut(s) | 14, 72, 167, 175, 281, 304, 491 |
| CviKI_1 | RGCY | 7 cut(s) | 14, 72, 167, 175, 281, 304, 491 |
| DpnI | GATC | 4 cut(s) | 146, 186, 276, 432 |
| DpnII | GATC | 4 cut(s) | 144, 184, 274, 430 |
| EaeI | YGGCCR | 1 cut(s) | 489 |
| Eco130I | CCWWGG | 1 cut(s) | 240 |
| Eco32I | GATATC | 1 cut(s) | 217 |
| Eco88I | CYCGRG | 1 cut(s) | 67 |
| EcoRII | CCWGG | 1 cut(s) | 482 |
| EcoRV | GATATC | 1 cut(s) | 217 |
| EcoT14I | CCWWGG | 1 cut(s) | 240 |
| ErhI | CCWWGG | 1 cut(s) | 240 |
| FaeI | CATG | 2 cut(s) | 91, 431 |
| FatI | CATG | 2 cut(s) | 87, 427 |
| FauI | CCCGC | 1 cut(s) | 399 |
| FblI | GTMKAC | 1 cut(s) | 236 |
| Fnu4HI | GCNGC | 1 cut(s) | 339 |
| Fsp4HI | GCNGC | 1 cut(s) | 339 |
| GluI | GCNGC | 1 cut(s) | 339 |
| HaeIII | GGCC | 3 cut(s) | 14, 175, 491 |
| HapII | CCGG | 1 cut(s) | 51 |
| HgaI | GACGC | 1 cut(s) | 13 |
| Hin1II | CATG | 2 cut(s) | 91, 431 |
| HinfI | GANTC | 3 cut(s) | 130, 316, 437 |
| HpaII | CCGG | 1 cut(s) | 51 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy166II | GTNNAC | 1 cut(s) | 237 |
| Hpy188III | TCNNGA | 6 cut(s) | 19, 121, 134, 284, 353, 434 |
| Hpy8I | GTNNAC | 1 cut(s) | 237 |
| HpyAV | CCTTC | 3 cut(s) | 38, 118, 198 |
| HpyCH4III | ACNGT | 1 cut(s) | 234 |
| HpyCH4V | TGCA | 2 cut(s) | 181, 341 |
| Hsp92II | CATG | 2 cut(s) | 91, 431 |
| Kzo9I | GATC | 4 cut(s) | 144, 184, 274, 430 |
| LpnPI | CCDG | 4 cut(s) | 64, 167, 419, 469 |
| Lsp1109I | GCAGC | 1 cut(s) | 325 |
| LweI | GCATC | 3 cut(s) | 325, 393, 480 |
| MalI | GATC | 4 cut(s) | 146, 186, 276, 432 |
| MboI | GATC | 4 cut(s) | 144, 184, 274, 430 |
| MboII | GAAGA | 4 cut(s) | 211, 211, 214, 311 |
| MfeI | CAATTG | 1 cut(s) | 169 |
| MflI | RGATCY | 1 cut(s) | 184 |
| MlsI | TGGCCA | 1 cut(s) | 491 |
| MluCI | AATT | 6 cut(s) | 59, 169, 255, 308, 386, 444 |
| MluNI | TGGCCA | 1 cut(s) | 491 |
| MmeI | TCCRAC | 1 cut(s) | 393 |
| MnlI | CCTC | 3 cut(s) | 244, 367, 409 |
| Mox20I | TGGCCA | 1 cut(s) | 491 |
| MscI | TGGCCA | 1 cut(s) | 491 |
| MseI | TTAA | 2 cut(s) | 39, 258 |
| Msp20I | TGGCCA | 1 cut(s) | 491 |
| MspI | CCGG | 1 cut(s) | 51 |
| MspR9I | CCNGG | 1 cut(s) | 484 |
| MunI | CAATTG | 1 cut(s) | 169 |
| MvaI | CCWGG | 1 cut(s) | 484 |
| NdeII | GATC | 4 cut(s) | 144, 184, 274, 430 |
| NlaIII | CATG | 2 cut(s) | 91, 431 |
| NlaIV | GGNNCC | 2 cut(s) | 186, 481 |
| PfeI | GAWTC | 3 cut(s) | 130, 316, 437 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 433 |
| PkrI | GCNGC | 1 cut(s) | 340 |
| PshBI | ATTAAT | 1 cut(s) | 39 |
| Psp6I | CCWGG | 1 cut(s) | 482 |
| PspGI | CCWGG | 1 cut(s) | 482 |
| PspN4I | GGNNCC | 2 cut(s) | 186, 481 |
| PsuI | RGATCY | 1 cut(s) | 184 |
| SaqAI | TTAA | 2 cut(s) | 39, 258 |
| SatI | GCNGC | 1 cut(s) | 339 |
| Sau3AI | GATC | 4 cut(s) | 144, 184, 274, 430 |
| ScrFI | CCNGG | 1 cut(s) | 484 |
| SetI | ASST | 7 cut(s) | 74, 255, 283, 299, 306, 329, 485 |
| SfaNI | GCATC | 3 cut(s) | 325, 393, 480 |
| SfcI | CTRYAG | 1 cut(s) | 73 |
| SmlI | CTYRAG | 1 cut(s) | 282 |
| SmoI | CTYRAG | 1 cut(s) | 282 |
| Sse9I | AATT | 6 cut(s) | 59, 169, 255, 308, 386, 444 |
| SsiI | CCGC | 2 cut(s) | 406, 477 |
| StyD4I | CCNGG | 1 cut(s) | 482 |
| StyI | CCWWGG | 1 cut(s) | 240 |
| TaaI | ACNGT | 1 cut(s) | 234 |
| TaqI | TCGA | 3 cut(s) | 18, 122, 135 |
| TasI | AATT | 6 cut(s) | 59, 169, 255, 308, 386, 444 |
| TfiI | GAWTC | 3 cut(s) | 130, 316, 437 |
| Tru1I | TTAA | 2 cut(s) | 39, 258 |
| Tru9I | TTAA | 2 cut(s) | 39, 258 |
| TscAI | CASTG | 1 cut(s) | 427 |
| TseI | GCWGC | 1 cut(s) | 338 |
| TspDTI | ATGAA | 1 cut(s) | 437 |
| TspRI | CASTG | 1 cut(s) | 427 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 433 |
| VspI | ATTAAT | 1 cut(s) | 39 |
| XapI | RAATTY | 2 cut(s) | 59, 444 |
| XmiI | GTMKAC | 1 cut(s) | 236 |