Rroxscaffold_1G00059680

structural constituent of ribosome

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0018001
Physical Location & Seq
Reverse (-)
81743697 .. 81745589
1893 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00059680.1

Sequence Viewer

Length: 1332 bp
ATGGCCGACATTGGCGACATAGGCGATGATGGTGTTCAACTTCAAGGGAAGGAGCTATATAAGCACCAGTTTAAGCAGACTTTCACCACACGCTTGACAGAGATTCTGGCATTTGATCCCAACTCTGTGGTTTCAGAGAGGGGGGTGATAGAGACTCTGGAGAAGTTAAACCGAGCGGCAATCATGTATGGCAGGAGCTACATTGCCGAAGATGAGTCCGAGTATGTTGATTGCTCTAATGTGATTGGGTTTGGTTTGCCCCTGATTGGCCAGGAGAGGTGCTTCATGCAGTTGCTCAGAGAGTGTGATCCACAATCGGAAGTGGGTAGGAAATTGTGGAACATGAAACACCAAGCAATTCTTGTTGGTGAAAAAGTCTCGCAGCATCTTATAAGGATGATGGTGGTGATGAACACAGAGAACAAAAAGGAAATGATGAAGAAGTTCAGAGATACTGTGCATCTGTTTCCATTCTTAGTGGATGCTTTTGAATGGCCCGGGAGAAGTGAATATTTTGGAGTAGTGTATAACAGGATCAACGTTCTTATGGAACACGCACGCAAAGAATTCATCCTGCAGGTTAAGAGATCAAGAATGCCAGCTGGGAGTCTGGGATATGTTGAAGACCTTCTCATAAATTTAGACAACAAAAACGAGCGTGATGAATTTCTTGATGACCTCCTTGATCAGATTGTGGAAGTTATCTCAATGCTGGAGTCTCTGCTGAGCTTTCCACTACTGCCCGATGGGCCAAGGTTGCTCTCTAGAAATATAAGATCAGTAGCTTGGCTGCGTAAGGAGCTTGTGGATATGGAAATAAAGATGCACAACAATATTGGAAAAAGGGTAAGAGAACTGATGGTAAAGTATAAAGGGAATAAGTATTTCAATGATACTGCTGCATTTCTCACGAGAGTGTATTCACCAAGACATGATATGTGGGAGGATTTGGAAAGTGTGGTGAAAGCGGTGAAGCTGGGACCCCAATCCCGAGGGCGAGTCAGACTCCATGTTGGAGGAACTATCATTCAAAAGTACCGGAATAGCGCACTGATTCGGATAGTAGGAGTCAACACCAGGAAGGAAGCTGAGTCGTTCACTGCAAAGCACATTGTCTACTTCTACAGGGCTAACGTGAAGAAAAACAACAGCCACTACCGCTGCATTTGGGGAAAGGTTACTAGGCCTCATGATAACAGTGGCATTCTTTGTGCTAGTTGCACAGGCCGCCTTTCGTCTATGGAGACTAATCTTGCAGTTCCCCAGGACCTTCATCTAATCTCGTGCTTGGTTTTGTTGGGTTCCATCTTGGTCACTTCCCGACTATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000956 GO:0002181 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0003824 GO:0004518 GO:0004519 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006518 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009892 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0015031 GO:0015833 GO:0015934 GO:0016020 GO:0016070 GO:0016071 GO:0016072 GO:0016787 GO:0016788 GO:0019222 GO:0019439 GO:0019538 GO:0019843 GO:0022414 GO:0022613 GO:0022625 GO:0022626 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034470 GO:0034613 GO:0034641 GO:0034645 GO:0034655 GO:0034660 GO:0042254 GO:0042273 GO:0042886 GO:0043021 GO:0043043 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044877 GO:0045047 GO:0045184 GO:0046483 GO:0046700 GO:0046872 GO:0046907 GO:0046914 GO:0048316 GO:0048519 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0060255 GO:0061458 GO:0065007 GO:0070727 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko00230 ko01100 ko01110 ko01130 ko03010 map00230 map01100 map01110 map01130 map03010
Pfam Domains
Protein Families
Ribosomal_L35Ae

Protein Analysis

443

Amino Acids

50.99

Weight (kDa)

8.97

Isoelectric Point (pI)

44.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ribosomal_L35Ae PF01247 345 - 412 1.5e-15 Ribosomal protein L35Ae
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018001)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11060
rosa_chinensis RchiOBHm_Chr5g0017881
rosa_laevigata RLG00000032319
rosa_multiflora Rmu_sc0003834.1_g000003
rosa_roxburghii Rroxscaffold_1G00059680
rosa_rugosa Rorug05G0039000
rosa_samantha Rh5AG131900 Rh5BG129700 Rh5CG142400 Rh5DG131900
rosa_wichuraiana Rw5G011480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 392
Acc36I ACCTGC 1 cut(s) 568
AccBSI CCGCTC 1 cut(s) 176
AccI GTMKAC 1 cut(s) 1116
AciI CCGC 4 cut(s) 176, 968, 1159, 1228
AclI AACGTT 1 cut(s) 540
AclWI GGATC 3 cut(s) 110, 302, 542
AcoI YGGCCR 2 cut(s) 3, 268
AcsI RAATTY 3 cut(s) 566, 637, 665
AfaI GTAC 1 cut(s) 1037
AfiI CCNNNNNNNGG 1 cut(s) 266
AgsI TTSAA 6 cut(s) 38, 44, 491, 623, 889, 1031
AjnI CCWGG 3 cut(s) 270, 1076, 1263
AleI CACNNNNGTG 1 cut(s) 914
AluBI AGCT 8 cut(s) 55, 198, 602, 729, 785, 802, 976, 1088
AluI AGCT 8 cut(s) 55, 198, 602, 729, 785, 802, 976, 1088
Alw26I GTCTC 4 cut(s) 146, 382, 723, 1238
AlwI GGATC 3 cut(s) 110, 302, 542
Ama87I CYCGRG 2 cut(s) 497, 990
AoxI GGCC 6 cut(s) 3, 268, 494, 749, 1184, 1225
ApeKI GCWGC 4 cut(s) 382, 790, 899, 1161
ApoI RAATTY 3 cut(s) 566, 637, 665
Asp700I GAANNNNTTC 2 cut(s) 443, 627
AspLEI GCGC 1 cut(s) 1049
AspS9I GGNCC 4 cut(s) 495, 749, 980, 1267
AsuC2I CCSGG 2 cut(s) 498, 499
AsuHPI GGTGA 7 cut(s) 76, 157, 380, 418, 915, 973, 982
AvaI CYCGRG 2 cut(s) 497, 990
AvaII GGWCC 2 cut(s) 980, 1267
BalI TGGCCA 1 cut(s) 270
BauI CACGAG 2 cut(s) 910, 1282
BbsI GAAGAC 1 cut(s) 630
BbvI GCAGC 4 cut(s) 394, 777, 886, 1148
BccI CCATC 5 cut(s) 23, 394, 740, 853, 1313
BciT130I CCWGG 3 cut(s) 272, 1078, 1265
BclI TGATCA 1 cut(s) 685
BcnI CCSGG 2 cut(s) 498, 499
BcoDI GTCTC 4 cut(s) 146, 382, 723, 1238
BfaI CTAG 3 cut(s) 765, 1182, 1215
BfmI CTRYAG 2 cut(s) 575, 1123
BfuAI ACCTGC 1 cut(s) 568
BglI GCCNNNNNGGC 1 cut(s) 748
BisI GCNGC 6 cut(s) 177, 383, 791, 900, 1162, 1228
BlpI GCTNAGC 1 cut(s) 725
BlsI GCNGC 6 cut(s) 178, 384, 792, 901, 1163, 1229
Bme1390I CCNGG 5 cut(s) 272, 498, 499, 1078, 1265
Bme18I GGWCC 2 cut(s) 980, 1267
BmeT110I CYCGRG 2 cut(s) 497, 990
BmgT120I GGNCC 4 cut(s) 495, 749, 980, 1267
BmiI GGNNCC 3 cut(s) 981, 982, 1303
BmrFI CCNGG 5 cut(s) 272, 498, 499, 1078, 1265
BmsI GCATC 4 cut(s) 394, 469, 472, 813
BpiI GAAGAC 1 cut(s) 630
BplI GAGNNNNNCTC 2 cut(s) 990, 1022
BpmI CTGGAG 2 cut(s) 179, 734
Bpu1102I GCTNAGC 1 cut(s) 725
BpuMI CCSGG 2 cut(s) 498, 499
BsaJI CCNNGG 4 cut(s) 497, 752, 991, 1263
BsaWI WCCGGW 1 cut(s) 1038
Bsc4I CCNNNNNNNGG 1 cut(s) 266
Bse1I ACTGG 1 cut(s) 67
Bse3DI GCAATG 1 cut(s) 201
BseBI CCWGG 3 cut(s) 272, 1078, 1265
BseDI CCNNGG 4 cut(s) 497, 752, 991, 1263
BseGI GGATG 3 cut(s) 402, 487, 570
BseLI CCNNNNNNNGG 1 cut(s) 266
BseMI GCAATG 1 cut(s) 201
BseMII CTCAG 3 cut(s) 310, 716, 1080
BseNI ACTGG 1 cut(s) 67
BseXI GCAGC 4 cut(s) 394, 777, 886, 1148
BseYI CCCAGC 2 cut(s) 602, 976
BshFI GGCC 6 cut(s) 5, 270, 496, 751, 1186, 1227
BsiHKCI CYCGRG 2 cut(s) 497, 990
BsiSI CCGG 2 cut(s) 498, 1039
BslFI GGGAC 1 cut(s) 993
BslI CCNNNNNNNGG 1 cut(s) 266
BsmAI GTCTC 4 cut(s) 146, 382, 723, 1238
BsmFI GGGAC 1 cut(s) 993
BsmI GAATGC 2 cut(s) 600, 1203
BsnI GGCC 6 cut(s) 5, 270, 496, 751, 1186, 1227
BsoBI CYCGRG 2 cut(s) 497, 990
Bsp143I GATC 6 cut(s) 115, 307, 534, 587, 685, 776
Bsp1720I GCTNAGC 1 cut(s) 725
BspACI CCGC 4 cut(s) 176, 968, 1159, 1228
BspANI GGCC 6 cut(s) 5, 270, 496, 751, 1186, 1227
BspCNI CTCAG 3 cut(s) 309, 717, 1081
BspHI TCATGA 1 cut(s) 1189
BspLI GGNNCC 3 cut(s) 981, 982, 1303
BspMAI CTGCAG 1 cut(s) 579
BspMI ACCTGC 1 cut(s) 568
BspPI GGATC 3 cut(s) 110, 302, 542
BsrBI CCGCTC 1 cut(s) 176
BsrDI GCAATG 1 cut(s) 201
BsrI ACTGG 1 cut(s) 67
BssECI CCNNGG 4 cut(s) 497, 752, 991, 1263
BssMI GATC 6 cut(s) 115, 307, 534, 587, 685, 776
BssSI CACGAG 2 cut(s) 910, 1282
BssT1I CCWWGG 1 cut(s) 752
Bst2BI CACGAG 2 cut(s) 910, 1282
Bst2UI CCWGG 3 cut(s) 272, 1078, 1265
Bst4CI ACNGT 2 cut(s) 457, 1199
BstC8I GCNNGC 2 cut(s) 559, 600
BstDEI CTNAG 4 cut(s) 296, 475, 725, 1089
BstF5I GGATG 3 cut(s) 402, 487, 570
BstHHI GCGC 1 cut(s) 1049
BstKTI GATC 6 cut(s) 118, 310, 537, 590, 688, 779
BstMAI GTCTC 4 cut(s) 146, 382, 723, 1238
BstMBI GATC 6 cut(s) 115, 307, 534, 587, 685, 776
BstMWI GCNNNNNNNGC 7 cut(s) 21, 61, 748, 757, 799, 1158, 1227
BstNI CCWGG 3 cut(s) 272, 1078, 1265
BstSCI CCNGG 5 cut(s) 270, 496, 497, 1076, 1263
BstSFI CTRYAG 2 cut(s) 575, 1123
BstV1I GCAGC 4 cut(s) 394, 777, 886, 1148
BstV2I GAAGAC 1 cut(s) 630
BstXI CCANNNNNNTGG 1 cut(s) 127
BsuRI GGCC 6 cut(s) 5, 270, 496, 751, 1186, 1227
BtgZI GCGATG 1 cut(s) 39
BtsCI GGATG 3 cut(s) 402, 487, 570
BtsI GCAGTG 1 cut(s) 1098
BtsIMutI CAGTG 3 cut(s) 1049, 1098, 1204
BveI ACCTGC 1 cut(s) 568
Cac8I GCNNGC 2 cut(s) 559, 600
CciI TCATGA 1 cut(s) 1189
CfoI GCGC 1 cut(s) 1049
Cfr13I GGNCC 4 cut(s) 495, 749, 980, 1267
Cfr9I CCCGGG 1 cut(s) 497
Csp6I GTAC 1 cut(s) 1036
CviAII CATG 6 cut(s) 184, 286, 343, 932, 1010, 1190
CviQI GTAC 1 cut(s) 1036
DdeI CTNAG 4 cut(s) 296, 475, 725, 1089
DpnI GATC 6 cut(s) 117, 309, 536, 589, 687, 778
DpnII GATC 6 cut(s) 115, 307, 534, 587, 685, 776
EaeI YGGCCR 2 cut(s) 3, 268
Eco130I CCWWGG 1 cut(s) 752
Eco147I AGGCCT 1 cut(s) 1186
Eco47I GGWCC 2 cut(s) 980, 1267
Eco88I CYCGRG 2 cut(s) 497, 990
EcoO109I RGGNCCY 2 cut(s) 980, 1267
EcoRI GAATTC 1 cut(s) 566
EcoRII CCWGG 3 cut(s) 270, 1076, 1263
EcoT14I CCWWGG 1 cut(s) 752
ErhI CCWWGG 1 cut(s) 752
FaeI CATG 6 cut(s) 187, 289, 346, 935, 1013, 1193
FalI AAGNNNNNCTT 2 cut(s) 345, 377
FaqI GGGAC 1 cut(s) 993
FatI CATG 6 cut(s) 183, 285, 342, 931, 1009, 1189
FbaI TGATCA 1 cut(s) 685
FblI GTMKAC 1 cut(s) 1116
Fnu4HI GCNGC 6 cut(s) 177, 383, 791, 900, 1162, 1228
FokI GGATG 3 cut(s) 409, 494, 557
Fsp4HI GCNGC 6 cut(s) 177, 383, 791, 900, 1162, 1228
FspBI CTAG 3 cut(s) 765, 1182, 1215
GlaI GCGC 1 cut(s) 1048
GluI GCNGC 6 cut(s) 177, 383, 791, 900, 1162, 1228
GsaI CCCAGC 2 cut(s) 606, 980
GsuI CTGGAG 2 cut(s) 179, 734
HaeIII GGCC 6 cut(s) 5, 270, 496, 751, 1186, 1227
HapII CCGG 2 cut(s) 498, 1039
HhaI GCGC 1 cut(s) 1049
Hin1II CATG 6 cut(s) 187, 289, 346, 935, 1013, 1193
Hin6I GCGC 1 cut(s) 1047
HinP1I GCGC 1 cut(s) 1047
HincII GTYRAC 1 cut(s) 1072
HindII GTYRAC 1 cut(s) 1072
HpaII CCGG 2 cut(s) 498, 1039
HphI GGTGA 7 cut(s) 76, 157, 380, 418, 915, 973, 982
Hpy166II GTNNAC 3 cut(s) 1072, 1098, 1117
Hpy188I TCNGA 8 cut(s) 136, 220, 299, 319, 449, 690, 1004, 1059
Hpy188III TCNNGA 8 cut(s) 158, 591, 671, 765, 910, 990, 1190, 1320
Hpy8I GTNNAC 3 cut(s) 1072, 1098, 1117
HpyAV CCTTC 4 cut(s) 43, 638, 1075, 1280
HpyCH4III ACNGT 2 cut(s) 457, 1199
HpyCH4IV ACGT 2 cut(s) 540, 1134
HpyCH4V TGCA 9 cut(s) 289, 460, 577, 826, 902, 1103, 1164, 1221, 1256
HpyF10VI GCNNNNNNNGC 7 cut(s) 21, 61, 748, 757, 799, 1158, 1227
HpyF3I CTNAG 4 cut(s) 296, 475, 725, 1089
HpySE526I ACGT 2 cut(s) 540, 1134
Hsp92II CATG 6 cut(s) 187, 289, 346, 935, 1013, 1193
HspAI GCGC 1 cut(s) 1047
KflI GGGWCCC 1 cut(s) 980
Ksp22I TGATCA 1 cut(s) 685
Kzo9I GATC 6 cut(s) 115, 307, 534, 587, 685, 776
LmnI GCTCC 3 cut(s) 52, 195, 799
Lsp1109I GCAGC 4 cut(s) 394, 777, 886, 1148
LweI GCATC 4 cut(s) 394, 469, 472, 813
MaeI CTAG 3 cut(s) 765, 1182, 1215
MaeII ACGT 2 cut(s) 540, 1134
MaeIII GTNAC 2 cut(s) 1177, 1312
MalI GATC 6 cut(s) 117, 309, 536, 589, 687, 778
MbiI CCGCTC 1 cut(s) 176
MboI GATC 6 cut(s) 115, 307, 534, 587, 685, 776
MboII GAAGA 4 cut(s) 221, 451, 635, 1150
MlsI TGGCCA 1 cut(s) 270
MluCI AATT 5 cut(s) 332, 357, 566, 637, 665
MluNI TGGCCA 1 cut(s) 270
MlyI GAGTC 8 cut(s) 148, 224, 616, 725, 999, 1008, 1077, 1100
MmeI TCCRAC 1 cut(s) 994
MnlI CCTC 7 cut(s) 132, 270, 689, 937, 986, 1010, 1197
Mox20I TGGCCA 1 cut(s) 270
MroXI GAANNNNTTC 2 cut(s) 443, 627
MscI TGGCCA 1 cut(s) 270
MseI TTAA 3 cut(s) 72, 167, 582
MslI CAYNNNNRTG 1 cut(s) 914
Msp20I TGGCCA 1 cut(s) 270
MspA1I CMGCKG 2 cut(s) 602, 1161
MspI CCGG 2 cut(s) 498, 1039
MspR9I CCNGG 5 cut(s) 272, 498, 499, 1078, 1265
Mva1269I GAATGC 2 cut(s) 600, 1203
MvaI CCWGG 3 cut(s) 272, 1078, 1265
MwoI GCNNNNNNNGC 7 cut(s) 21, 61, 748, 757, 799, 1158, 1227
NciI CCSGG 2 cut(s) 498, 499
NdeII GATC 6 cut(s) 115, 307, 534, 587, 685, 776
NlaIII CATG 6 cut(s) 187, 289, 346, 935, 1013, 1193
NlaIV GGNNCC 3 cut(s) 981, 982, 1303
NmuCI GTSAC 1 cut(s) 1312
OliI CACNNNNGTG 1 cut(s) 914
PagI TCATGA 1 cut(s) 1189
PceI AGGCCT 1 cut(s) 1186
PctI GAATGC 2 cut(s) 600, 1203
PdmI GAANNNNTTC 2 cut(s) 443, 627
PfeI GAWTC 2 cut(s) 103, 1054
PkrI GCNGC 6 cut(s) 178, 384, 792, 901, 1163, 1229
PleI GAGTC 8 cut(s) 148, 223, 615, 724, 999, 1007, 1076, 1099
PpsI GAGTC 8 cut(s) 148, 223, 615, 724, 999, 1007, 1076, 1099
PpuMI RGGWCCY 2 cut(s) 980, 1267
PsiI TTATAA 1 cut(s) 392
Psp1406I AACGTT 1 cut(s) 540
Psp5II RGGWCCY 2 cut(s) 980, 1267
Psp6I CCWGG 3 cut(s) 270, 1076, 1263
PspFI CCCAGC 2 cut(s) 602, 976
PspGI CCWGG 3 cut(s) 270, 1076, 1263
PspN4I GGNNCC 3 cut(s) 981, 982, 1303
PspPI GGNCC 4 cut(s) 495, 749, 980, 1267
PspPPI RGGWCCY 2 cut(s) 980, 1267
PstI CTGCAG 1 cut(s) 579
PvuII CAGCTG 1 cut(s) 602
RsaI GTAC 1 cut(s) 1037
RsaNI GTAC 1 cut(s) 1036
RseI CAYNNNNRTG 1 cut(s) 914
SaqAI TTAA 3 cut(s) 72, 167, 582
SatI GCNGC 6 cut(s) 177, 383, 791, 900, 1162, 1228
Sau3AI GATC 6 cut(s) 115, 307, 534, 587, 685, 776
Sau96I GGNCC 4 cut(s) 495, 749, 980, 1267
SbfI CCTGCAGG 1 cut(s) 579
SchI GAGTC 8 cut(s) 148, 224, 616, 725, 999, 1008, 1077, 1100
ScrFI CCNGG 5 cut(s) 272, 498, 499, 1078, 1265
SdaI CCTGCAGG 1 cut(s) 579
SfaNI GCATC 4 cut(s) 394, 469, 472, 813
SfcI CTRYAG 2 cut(s) 575, 1123
SinI GGWCC 2 cut(s) 980, 1267
SmaI CCCGGG 1 cut(s) 499
SmiMI CAYNNNNRTG 1 cut(s) 914
Sse8387I CCTGCAGG 1 cut(s) 579
Sse9I AATT 5 cut(s) 332, 357, 566, 637, 665
SseBI AGGCCT 1 cut(s) 1186
SsiI CCGC 4 cut(s) 176, 968, 1159, 1228
SspI AATATT 2 cut(s) 512, 835
SspMI CTAG 3 cut(s) 765, 1182, 1215
StuI AGGCCT 1 cut(s) 1186
StyD4I CCNGG 5 cut(s) 270, 496, 497, 1076, 1263
StyI CCWWGG 1 cut(s) 752
TaaI ACNGT 2 cut(s) 457, 1199
TaiI ACGT 2 cut(s) 543, 1137
TasI AATT 5 cut(s) 332, 357, 566, 637, 665
TauI GCSGC 2 cut(s) 179, 1230
TfiI GAWTC 2 cut(s) 103, 1054
Tru1I TTAA 3 cut(s) 72, 167, 582
Tru9I TTAA 3 cut(s) 72, 167, 582
TscAI CASTG 3 cut(s) 1056, 1105, 1204
TseFI GTSAC 1 cut(s) 1312
TseI GCWGC 4 cut(s) 382, 790, 899, 1161
Tsp45I GTSAC 1 cut(s) 1312
TspDTI ATGAA 7 cut(s) 274, 359, 425, 452, 559, 678, 1262
TspMI CCCGGG 1 cut(s) 497
TspRI CASTG 3 cut(s) 1056, 1105, 1204
VpaK11BI GGWCC 2 cut(s) 980, 1267
XapI RAATTY 3 cut(s) 566, 637, 665
XbaI TCTAGA 1 cut(s) 764
XmaI CCCGGG 1 cut(s) 497
XmiI GTMKAC 1 cut(s) 1116
XmnI GAANNNNTTC 2 cut(s) 443, 627
XspI CTAG 3 cut(s) 765, 1182, 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.