Rroxscaffold_2G00123310

Aminotransferase class-V

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0010521
Physical Location & Seq
Reverse (-)
57182217 .. 57186213
3997 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00123310.1

Sequence Viewer

Length: 2067 bp
ATGGACATGCAGTTCAGGTTGAGAGATATCCTTAATATTAGTGTTACTTGTCCGAAAATAAGCACAAATAAAAATAAAAGTAAAACAGGTTCTTCTCGAGCTGCTGAATCATCACTTTACAAGTCTAATAATGATCCTTGCAATAGCAGTAGTACTACTTCTGATCAATCATTCAGGAAGCTGGAGCAGGATGAGGTTCCGAAGACCAAGTCGGCGGAGCTACGACTGTCTTGGCTTCGCTCTCAAGTCATCGGTGCTTCCGTAGAATTCGATTCTCCCTTTGGGAAACGACGACTCACCTACGCCGATCACACTGCTTCCGGCCGCTCTCTTCACTATATCGAAAGCTTCATCATCAATAATGTTCTTCCCTTTTATGGAAATACTCACACTTGCGAGAGTTATGTTGGTCTTCGGACTACAAAAATGGTGTATCAAGCAGGCAAATACATCAAGAAATGCTTAGGAGGTGGAGAAGAGGATGCACTCATGTTTTGTGGCCAGGGCACCACTTCAGCAATTAAAAGGTTCCAAGAGGTGATGGGCGTTACCGTACCATCAATTTTAAGAGAGAGGGTCATAAACACTCTTGGTACCCAAGAAAGATGGGTGGTGTTTGTTGGTCCCTATGAGCACCACTCGAACCTTCTTTCGTGGCGGCAAAGCCTGGCTGAAGTAGTTGAGATTGGTCTAAATGATGAAGGCTTACTGGATATGGAAGCTCTTACACTGCAACTCGAGGCATTCAAACATGCTAACCGCCCAATTTTGGGTTCCTTCTCGGCTTGTAGTAATGTCACCGGAGTTTATCCGGACACGCGAGCAATTGCACGACTTCTTCATCAATATGGAGGATTTGTGTGCTTTGATTACGCCGCAAGCGGACCATATGTGGAAATTGATATGAGGTCAGGGGAGATAGAAGGGTACGACGGTGTTTTTCTTAGTCCACACAAGTTTGTTGGGGGACCTGGTTCCCCAGGCATTCTCCTTATTAGCAAGGCTCTCTATCAGCTTAGATCTTCTCCACCGTCCGCTTGTGGAGGTGGAACTGTTGATTATGTCAATGGCTTCAGTGAAAAGCCAGATCACATGATTCACATCATTTTCATTAGCTCTTCGTTCGAGAAACTACACACGTTGAAAAAAATTGAAATAATTGAAAGACTTGCAATGCAGGACACATTATATTTTGAGGACATTGAAGAAAGGGAAAATGGGGGTACACCGCAGATAATACAAACAATTCGAGCAGCATTGGCTTTTTGGGTGAAGGACTACATTGGTTATGAAGTGATAGAGAAACAGGAGCAGATATATGTTAGAAAGGCACTTCAAAGGCTCCTCCCGAATAAAAACATAAGGATTTTGGGAAATACAAGTACCAAGAGACAAGCTATTTTGTCTTTCCTCATTTACTCTACAACTAATACTTCTACTTCAAATGCAAGCATTGAGTACAACATGTGGGGACAGACTGAGAATGAGACAGTAGGGAACACAAGAGATAATCCCCTCCATGGCTCCTTTGTTACGGCCTTACTCAATGACCTATTTGGAATCCAGGCTAGAGGCGGATGCGACTGCGCAGGGCCGTACGGCCACGCTCTTCTCGGAATCGACGAGACTAGCTCGCATGCCTATAGATGTGCCATCCAGAAGGGCTATGTGGGATTGAAACCCGGTTGGACTCGAATCAGTTTTCCCTACTACATTTCAAATGATGAATTCGACTTCATCGTAGCTGCCTTGGAGTTTATAGCAGCTTATGGACAAAGGTTTCTTTCTTTATATAACTTCAATCCCAGAAGAGGAAGCAGCTGGACTATCAAGAAGGAGGAACTCCAAAGCATACTTGCTGTTAGGAAGAAGACCAATTGCCAGGACAAACTTAAACAAGACTGCATTAATACAAATGATGCAGAGAAACAAGAAGGGCTACTAATTAGTAAATTTGCCTCATATTTGGAAACGGCTACGCGCATTGCGAGTCTCTTGCCCAAGTTTCCTCCTAAGCGTATGCTTCAGCAAGACATAGACATCAATCTCTTGCACTACAGAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aminotran_5

Protein Analysis

688

Amino Acids

77.14

Weight (kDa)

8.08

Isoelectric Point (pI)

46.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_5 PF00266 122 - 356 4e-17 Aminotransferase class-V
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1588
Acc65I GGTACC 1 cut(s) 593
AccB1I GGYRCC 2 cut(s) 506, 593
AccBSI CCGCTC 1 cut(s) 327
AccII CGCG 2 cut(s) 820, 1981
AccIII TCCGGA 1 cut(s) 811
AciI CCGC 9 cut(s) 215, 325, 658, 760, 876, 882, 1035, 1229, 1575
AclWI GGATC 1 cut(s) 128
AcoI YGGCCR 3 cut(s) 322, 499, 1600
AcsI RAATTY 3 cut(s) 266, 1727, 1952
AcuI CTGAAG 4 cut(s) 498, 693, 1057, 2009
AfaI GTAC 8 cut(s) 154, 555, 595, 929, 1225, 1384, 1460, 1598
AfiI CCNNNNNNNGG 5 cut(s) 377, 769, 770, 1520, 1811
AflIII ACRYGT 2 cut(s) 1137, 1464
AjnI CCWGG 6 cut(s) 501, 666, 970, 979, 1563, 1881
AjuI GAANNNNNNNTTGG 2 cut(s) 757, 789
AloI GAACNNNNNNTCC 1 cut(s) 28
Alw21I GWGCWC 1 cut(s) 636
Alw26I GTCTC 4 cut(s) 1384, 1481, 1619, 1997
AlwI GGATC 1 cut(s) 128
Ama87I CYCGRG 2 cut(s) 96, 737
Aor13HI TCCGGA 1 cut(s) 811
AoxI GGCC 5 cut(s) 322, 499, 1536, 1592, 1600
ApeKI GCWGC 5 cut(s) 101, 1253, 1745, 1763, 1818
ApoI RAATTY 3 cut(s) 266, 1727, 1952
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AseI ATTAAT 1 cut(s) 1908
Asp718I GGTACC 1 cut(s) 593
AspLEI GCGC 2 cut(s) 1589, 1983
AspS9I GGNCC 4 cut(s) 623, 884, 968, 1592
AsuC2I CCSGG 1 cut(s) 1683
AsuHPI GGTGA 4 cut(s) 289, 550, 790, 1282
AvaI CYCGRG 2 cut(s) 96, 737
AvaII GGWCC 3 cut(s) 623, 884, 968
BaeGI GKGCMC 1 cut(s) 509
BaeI ACNNNNGTAYC 2 cut(s) 919, 952
BalI TGGCCA 1 cut(s) 501
BanI GGYRCC 2 cut(s) 506, 593
BarI GAAGNNNNNNTAC 2 cut(s) 142, 174
BbsI GAAGAC 3 cut(s) 209, 404, 1877
Bbv12I GWGCWC 1 cut(s) 636
BbvI GCAGC 5 cut(s) 88, 1265, 1732, 1775, 1830
BccI CCATC 4 cut(s) 535, 565, 600, 1661
BceAI ACGGC 4 cut(s) 1551, 1579, 1615, 1989
BcgI CGANNNNNNTGC 4 cut(s) 296, 330, 1978, 2012
BciT130I CCWGG 6 cut(s) 503, 668, 972, 981, 1565, 1883
BclI TGATCA 1 cut(s) 163
BcnI CCSGG 1 cut(s) 1683
BcoDI GTCTC 4 cut(s) 1384, 1481, 1619, 1997
BfaI CTAG 2 cut(s) 1569, 1629
BfmI CTRYAG 2 cut(s) 1642, 2056
BglII AGATCT 1 cut(s) 1019
BisI GCNGC 8 cut(s) 102, 325, 659, 876, 1254, 1746, 1764, 1819
BlsI GCNGC 8 cut(s) 103, 326, 660, 877, 1255, 1747, 1765, 1820
BmcAI AGTACT 1 cut(s) 154
Bme1390I CCNGG 7 cut(s) 503, 668, 972, 981, 1565, 1683, 1883
Bme18I GGWCC 3 cut(s) 623, 884, 968
BmeT110I CYCGRG 2 cut(s) 96, 737
BmgT120I GGNCC 4 cut(s) 623, 884, 968, 1592
BmrFI CCNGG 7 cut(s) 503, 668, 972, 981, 1565, 1683, 1883
BmsI GCATC 3 cut(s) 472, 1568, 1909
BpiI GAAGAC 3 cut(s) 209, 404, 1877
BplI GAGNNNNNCTC 4 cut(s) 623, 655, 1616, 1648
BpmI CTGGAG 1 cut(s) 203
Bpu10I CCTNAGC 2 cut(s) 463, 2013
BpuEI CTTGAG 1 cut(s) 228
BpuMI CCSGG 1 cut(s) 1683
BsaBI GATNNNNATC 1 cut(s) 1100
BsaJI CCNNGG 4 cut(s) 502, 979, 1519, 1749
BsaWI WCCGGW 2 cut(s) 800, 811
BsaXI ACNNNNNCTCC 2 cut(s) 843, 873
Bsc4I CCNNNNNNNGG 5 cut(s) 377, 769, 770, 1520, 1811
Bse1I ACTGG 1 cut(s) 714
Bse3DI GCAATG 2 cut(s) 1179, 1983
Bse8I GATNNNNATC 1 cut(s) 1100
BseAI TCCGGA 1 cut(s) 811
BseBI CCWGG 6 cut(s) 503, 668, 972, 981, 1565, 1883
BseDI CCNNGG 4 cut(s) 502, 979, 1519, 1749
BseGI GGATG 4 cut(s) 196, 487, 1583, 1653
BseJI GATNNNNATC 1 cut(s) 1100
BseLI CCNNNNNNNGG 5 cut(s) 377, 769, 770, 1520, 1811
BseMI GCAATG 2 cut(s) 1179, 1983
BseMII CTCAG 1 cut(s) 1470
BseNI ACTGG 1 cut(s) 714
BseRI GAGGAG 1 cut(s) 1334
BseSI GKGCMC 1 cut(s) 509
BseX3I CGGCCG 1 cut(s) 322
BseXI GCAGC 5 cut(s) 88, 1265, 1732, 1775, 1830
Bsh1236I CGCG 2 cut(s) 820, 1981
Bsh1285I CGRYCG 1 cut(s) 325
BshFI GGCC 5 cut(s) 324, 501, 1538, 1594, 1602
BshNI GGYRCC 2 cut(s) 506, 593
BsiEI CGRYCG 1 cut(s) 325
BsiHKAI GWGCWC 1 cut(s) 636
BsiHKCI CYCGRG 2 cut(s) 96, 737
BsiSI CCGG 4 cut(s) 321, 801, 812, 1683
BsiWI CGTACG 1 cut(s) 1596
BslFI GGGAC 3 cut(s) 609, 981, 1485
BslI CCNNNNNNNGG 5 cut(s) 377, 769, 770, 1520, 1811
BsmAI GTCTC 4 cut(s) 1384, 1481, 1619, 1997
BsmFI GGGAC 3 cut(s) 609, 981, 1485
BsmI GAATGC 2 cut(s) 743, 984
BsnI GGCC 5 cut(s) 324, 501, 1538, 1594, 1602
BsoBI CYCGRG 2 cut(s) 96, 737
Bsp1286I GDGCHC 2 cut(s) 509, 636
Bsp13I TCCGGA 1 cut(s) 811
Bsp143I GATC 5 cut(s) 133, 163, 307, 1019, 1087
Bsp19I CCATGG 1 cut(s) 1519
BspACI CCGC 9 cut(s) 215, 325, 658, 760, 876, 882, 1035, 1229, 1575
BspANI GGCC 5 cut(s) 324, 501, 1538, 1594, 1602
BspCNI CTCAG 1 cut(s) 1471
BspEI TCCGGA 1 cut(s) 811
BspFNI CGCG 2 cut(s) 820, 1981
BspPI GGATC 1 cut(s) 128
BspQI GCTCTTC 2 cut(s) 1123, 1614
BspT107I GGYRCC 2 cut(s) 506, 593
BsrBI CCGCTC 1 cut(s) 327
BsrDI GCAATG 2 cut(s) 1179, 1983
BsrI ACTGG 1 cut(s) 714
BssECI CCNNGG 4 cut(s) 502, 979, 1519, 1749
BssMI GATC 5 cut(s) 133, 163, 307, 1019, 1087
BssT1I CCWWGG 2 cut(s) 1519, 1749
Bst2UI CCWGG 6 cut(s) 503, 668, 972, 981, 1565, 1883
Bst4CI ACNGT 6 cut(s) 228, 553, 935, 1032, 1054, 1492
Bst6I CTCTTC 5 cut(s) 336, 471, 1123, 1614, 1804
BstC8I GCNNGC 6 cut(s) 442, 822, 880, 1450, 1634, 1638
BstDEI CTNAG 5 cut(s) 463, 944, 1016, 1479, 2013
BstDSI CCRYGG 1 cut(s) 1519
BstF5I GGATG 4 cut(s) 196, 487, 1583, 1653
BstFNI CGCG 2 cut(s) 820, 1981
BstHHI GCGC 2 cut(s) 1589, 1983
BstKTI GATC 5 cut(s) 136, 166, 310, 1022, 1090
BstMAI GTCTC 4 cut(s) 1384, 1481, 1619, 1997
BstMBI GATC 5 cut(s) 133, 163, 307, 1019, 1087
BstMCI CGRYCG 1 cut(s) 325
BstMWI GCNNNNNNNGC 1 cut(s) 1259
BstNI CCWGG 6 cut(s) 503, 668, 972, 981, 1565, 1883
BstNSI RCATGY 4 cut(s) 10, 755, 1468, 1640
BstSCI CCNGG 7 cut(s) 501, 666, 970, 979, 1563, 1681, 1881
BstSFI CTRYAG 2 cut(s) 1642, 2056
BstSLI GKGCMC 1 cut(s) 509
BstUI CGCG 2 cut(s) 820, 1981
BstV1I GCAGC 5 cut(s) 88, 1265, 1732, 1775, 1830
BstV2I GAAGAC 3 cut(s) 209, 404, 1877
BstX2I RGATCY 1 cut(s) 1019
BstYI RGATCY 1 cut(s) 1019
BstZI CGGCCG 1 cut(s) 322
BsuRI GGCC 5 cut(s) 324, 501, 1538, 1594, 1602
BtgI CCRYGG 1 cut(s) 1519
BtsCI GGATG 4 cut(s) 196, 487, 1583, 1653
BtsI GCAGTG 2 cut(s) 312, 728
BtsIMutI CAGTG 3 cut(s) 312, 728, 1081
Cac8I GCNNGC 6 cut(s) 442, 822, 880, 1450, 1634, 1638
CfoI GCGC 2 cut(s) 1589, 1983
Cfr13I GGNCC 4 cut(s) 623, 884, 968, 1592
CsiI ACCWGGT 1 cut(s) 970
Csp6I GTAC 8 cut(s) 153, 554, 594, 928, 1224, 1383, 1459, 1597
CviAII CATG 7 cut(s) 7, 490, 752, 1093, 1465, 1520, 1637
CviQI GTAC 8 cut(s) 153, 554, 594, 928, 1224, 1383, 1459, 1597
DdeI CTNAG 5 cut(s) 463, 944, 1016, 1479, 2013
DpnI GATC 5 cut(s) 135, 165, 309, 1021, 1089
DpnII GATC 5 cut(s) 133, 163, 307, 1019, 1087
EaeI YGGCCR 3 cut(s) 322, 499, 1600
EagI CGGCCG 1 cut(s) 322
Eam1104I CTCTTC 5 cut(s) 336, 471, 1123, 1614, 1804
EarI CTCTTC 5 cut(s) 336, 471, 1123, 1614, 1804
EciI GGCGGA 2 cut(s) 230, 1590
EclXI CGGCCG 1 cut(s) 322
Eco130I CCWWGG 2 cut(s) 1519, 1749
Eco32I GATATC 1 cut(s) 28
Eco47I GGWCC 3 cut(s) 623, 884, 968
Eco52I CGGCCG 1 cut(s) 322
Eco57I CTGAAG 4 cut(s) 498, 693, 1057, 2009
Eco88I CYCGRG 2 cut(s) 96, 737
EcoO109I RGGNCCY 1 cut(s) 968
EcoRI GAATTC 2 cut(s) 266, 1727
EcoRII CCWGG 6 cut(s) 501, 666, 970, 979, 1563, 1881
EcoRV GATATC 1 cut(s) 28
EcoT14I CCWWGG 2 cut(s) 1519, 1749
ErhI CCWWGG 2 cut(s) 1519, 1749
FaeI CATG 7 cut(s) 10, 493, 755, 1096, 1468, 1523, 1640
FalI AAGNNNNNCTT 2 cut(s) 446, 478
FaqI GGGAC 3 cut(s) 609, 981, 1485
FatI CATG 7 cut(s) 6, 489, 751, 1092, 1464, 1519, 1636
FauNDI CATATG 1 cut(s) 889
FbaI TGATCA 1 cut(s) 163
Fnu4HI GCNGC 8 cut(s) 102, 325, 659, 876, 1254, 1746, 1764, 1819
FokI GGATG 4 cut(s) 203, 494, 1590, 1640
Fsp4HI GCNGC 8 cut(s) 102, 325, 659, 876, 1254, 1746, 1764, 1819
FspBI CTAG 2 cut(s) 1569, 1629
FspI TGCGCA 1 cut(s) 1588
GlaI GCGC 2 cut(s) 1588, 1982
GluI GCNGC 8 cut(s) 102, 325, 659, 876, 1254, 1746, 1764, 1819
GsuI CTGGAG 1 cut(s) 203
HaeIII GGCC 5 cut(s) 324, 501, 1538, 1594, 1602
HapII CCGG 4 cut(s) 321, 801, 812, 1683
HhaI GCGC 2 cut(s) 1589, 1983
Hin1II CATG 7 cut(s) 10, 493, 755, 1096, 1468, 1523, 1640
Hin6I GCGC 2 cut(s) 1587, 1981
HinP1I GCGC 2 cut(s) 1587, 1981
HindIII AAGCTT 1 cut(s) 346
HpaII CCGG 4 cut(s) 321, 801, 812, 1683
HphI GGTGA 4 cut(s) 289, 550, 790, 1282
Hpy166II GTNNAC 2 cut(s) 950, 1226
Hpy188I TCNGA 5 cut(s) 54, 163, 201, 417, 1616
Hpy188III TCNNGA 8 cut(s) 96, 175, 454, 812, 1126, 1348, 1657, 1831
Hpy8I GTNNAC 2 cut(s) 950, 1226
Hpy99I CGWCG 3 cut(s) 294, 935, 1625
HpyAV CCTTC 8 cut(s) 656, 695, 787, 917, 1267, 1654, 1828, 1928
HpyCH4III ACNGT 6 cut(s) 228, 553, 935, 1032, 1054, 1492
HpyCH4IV ACGT 1 cut(s) 1139
HpyF10VI GCNNNNNNNGC 1 cut(s) 1259
HpyF3I CTNAG 5 cut(s) 463, 944, 1016, 1479, 2013
HpySE526I ACGT 1 cut(s) 1139
Hsp92II CATG 7 cut(s) 10, 493, 755, 1096, 1468, 1523, 1640
HspAI GCGC 2 cut(s) 1587, 1981
Kpn2I TCCGGA 1 cut(s) 811
KpnI GGTACC 1 cut(s) 597
Ksp22I TGATCA 1 cut(s) 163
Kzo9I GATC 5 cut(s) 133, 163, 307, 1019, 1087
LguI GCTCTTC 2 cut(s) 1123, 1614
LmnI GCTCC 5 cut(s) 184, 217, 1309, 1347, 1529
Lsp1109I GCAGC 5 cut(s) 88, 1265, 1732, 1775, 1830
LweI GCATC 3 cut(s) 472, 1568, 1909
MabI ACCWGGT 1 cut(s) 970
MaeI CTAG 2 cut(s) 1569, 1629
MaeII ACGT 1 cut(s) 1139
MaeIII GTNAC 4 cut(s) 43, 547, 796, 1531
MalI GATC 5 cut(s) 135, 165, 309, 1021, 1089
MbiI CCGCTC 1 cut(s) 327
MboI GATC 5 cut(s) 133, 163, 307, 1019, 1087
MfeI CAATTG 2 cut(s) 825, 1876
MflI RGATCY 1 cut(s) 1019
MhlI GDGCHC 2 cut(s) 509, 636
MlsI TGGCCA 1 cut(s) 501
MluNI TGGCCA 1 cut(s) 501
MlyI GAGTC 3 cut(s) 288, 1684, 1999
MmeI TCCRAC 1 cut(s) 1667
Mox20I TGGCCA 1 cut(s) 501
MroI TCCGGA 1 cut(s) 811
MscI TGGCCA 1 cut(s) 501
MseI TTAA 5 cut(s) 33, 522, 566, 1893, 1908
MslI CAYNNNNRTG 1 cut(s) 846
Msp20I TGGCCA 1 cut(s) 501
MspA1I CMGCKG 1 cut(s) 1821
MspI CCGG 4 cut(s) 321, 801, 812, 1683
MspR9I CCNGG 7 cut(s) 503, 668, 972, 981, 1565, 1683, 1883
MunI CAATTG 2 cut(s) 825, 1876
Mva1269I GAATGC 2 cut(s) 743, 984
MvaI CCWGG 6 cut(s) 503, 668, 972, 981, 1565, 1883
MvnI CGCG 2 cut(s) 820, 1981
MwoI GCNNNNNNNGC 1 cut(s) 1259
NciI CCSGG 1 cut(s) 1683
NcoI CCATGG 1 cut(s) 1519
NdeI CATATG 1 cut(s) 889
NdeII GATC 5 cut(s) 133, 163, 307, 1019, 1087
NlaIII CATG 7 cut(s) 10, 493, 755, 1096, 1468, 1523, 1640
NmeAIII GCCGAG 1 cut(s) 761
NmuCI GTSAC 1 cut(s) 796
NsbI TGCGCA 1 cut(s) 1588
NspI RCATGY 4 cut(s) 10, 755, 1468, 1640
PaeI GCATGC 1 cut(s) 1640
PaeR7I CTCGAG 2 cut(s) 96, 737
PciI ACATGT 1 cut(s) 1464
PciSI GCTCTTC 2 cut(s) 1123, 1614
PcsI WCGNNNNNNNCGW 4 cut(s) 258, 1620, 1737, 1985
PctI GAATGC 2 cut(s) 743, 984
PfeI GAWTC 6 cut(s) 107, 272, 1096, 1560, 1617, 1695
Pfl23II CGTACG 1 cut(s) 1596
PflFI GACNNNGTC 1 cut(s) 208
PkrI GCNGC 8 cut(s) 103, 326, 660, 877, 1255, 1747, 1765, 1820
PleI GAGTC 3 cut(s) 288, 1684, 1998
PpsI GAGTC 3 cut(s) 288, 1684, 1998
PpuMI RGGWCCY 1 cut(s) 968
PscI ACATGT 1 cut(s) 1464
PshBI ATTAAT 1 cut(s) 1908
Psp5II RGGWCCY 1 cut(s) 968
Psp6I CCWGG 6 cut(s) 501, 666, 970, 979, 1563, 1881
PspGI CCWGG 6 cut(s) 501, 666, 970, 979, 1563, 1881
PspLI CGTACG 1 cut(s) 1596
PspPI GGNCC 4 cut(s) 623, 884, 968, 1592
PspPPI RGGWCCY 1 cut(s) 968
PspXI VCTCGAGB 1 cut(s) 737
PsrI GAACNNNNNNTAC 2 cut(s) 73, 105
PsuI RGATCY 1 cut(s) 1019
PsyI GACNNNGTC 1 cut(s) 208
PvuII CAGCTG 1 cut(s) 1821
RsaI GTAC 8 cut(s) 154, 555, 595, 929, 1225, 1384, 1460, 1598
RsaNI GTAC 8 cut(s) 153, 554, 594, 928, 1224, 1383, 1459, 1597
RseI CAYNNNNRTG 1 cut(s) 846
SapI GCTCTTC 2 cut(s) 1123, 1614
SaqAI TTAA 5 cut(s) 33, 522, 566, 1893, 1908
SatI GCNGC 8 cut(s) 102, 325, 659, 876, 1254, 1746, 1764, 1819
Sau3AI GATC 5 cut(s) 133, 163, 307, 1019, 1087
Sau96I GGNCC 4 cut(s) 623, 884, 968, 1592
ScaI AGTACT 1 cut(s) 154
SchI GAGTC 3 cut(s) 288, 1684, 1999
ScrFI CCNGG 7 cut(s) 503, 668, 972, 981, 1565, 1683, 1883
SduI GDGCHC 2 cut(s) 509, 636
SexAI ACCWGGT 1 cut(s) 970
SfaNI GCATC 3 cut(s) 472, 1568, 1909
SfcI CTRYAG 2 cut(s) 1642, 2056
Sfr274I CTCGAG 2 cut(s) 96, 737
SinI GGWCC 3 cut(s) 623, 884, 968
SlaI CTCGAG 2 cut(s) 96, 737
SmiMI CAYNNNNRTG 1 cut(s) 846
SmlI CTYRAG 3 cut(s) 96, 243, 737
SmoI CTYRAG 3 cut(s) 96, 243, 737
SphI GCATGC 1 cut(s) 1640
SsiI CCGC 9 cut(s) 215, 325, 658, 760, 876, 882, 1035, 1229, 1575
SspI AATATT 1 cut(s) 37
SspMI CTAG 2 cut(s) 1569, 1629
StyD4I CCNGG 7 cut(s) 501, 666, 970, 979, 1563, 1681, 1881
StyI CCWWGG 2 cut(s) 1519, 1749
TaaI ACNGT 6 cut(s) 228, 553, 935, 1032, 1054, 1492
TaiI ACGT 1 cut(s) 1142
TatI WGTACW 2 cut(s) 152, 1458
TauI GCSGC 3 cut(s) 327, 661, 878
TfiI GAWTC 6 cut(s) 107, 272, 1096, 1560, 1617, 1695
Tru1I TTAA 5 cut(s) 33, 522, 566, 1893, 1908
Tru9I TTAA 5 cut(s) 33, 522, 566, 1893, 1908
TscAI CASTG 3 cut(s) 319, 735, 1081
TseFI GTSAC 1 cut(s) 796
TseI GCWGC 5 cut(s) 101, 1253, 1745, 1763, 1818
Tsp45I GTSAC 1 cut(s) 796
TspDTI ATGAA 7 cut(s) 340, 714, 830, 1099, 1305, 1726, 1740
TspGWI ACGGA 1 cut(s) 250
TspRI CASTG 3 cut(s) 319, 735, 1081
Tth111I GACNNNGTC 1 cut(s) 208
VpaK11BI GGWCC 3 cut(s) 623, 884, 968
VspI ATTAAT 1 cut(s) 1908
XapI RAATTY 3 cut(s) 266, 1727, 1952
XceI RCATGY 4 cut(s) 10, 755, 1468, 1640
XhoI CTCGAG 2 cut(s) 96, 737
XspI CTAG 2 cut(s) 1569, 1629
ZrmI AGTACT 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.