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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_3G00251360 Rroxscaffold_4G00325840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 68, 217, 284 |
| AcoI | YGGCCR | 1 cut(s) | 106 |
| AcyI | GRCGYC | 1 cut(s) | 96 |
| AgeI | ACCGGT | 1 cut(s) | 183 |
| AgsI | TTSAA | 2 cut(s) | 19, 40 |
| AluBI | AGCT | 5 cut(s) | 43, 57, 104, 117, 276 |
| AluI | AGCT | 5 cut(s) | 43, 57, 104, 117, 276 |
| Ama87I | CYCGRG | 1 cut(s) | 47 |
| AoxI | GGCC | 3 cut(s) | 106, 222, 329 |
| ApeKI | GCWGC | 1 cut(s) | 43 |
| AsiGI | ACCGGT | 1 cut(s) | 183 |
| AspS9I | GGNCC | 3 cut(s) | 223, 286, 329 |
| AsuHPI | GGTGA | 1 cut(s) | 313 |
| AsuII | TTCGAA | 1 cut(s) | 175 |
| AvaI | CYCGRG | 1 cut(s) | 47 |
| AvaII | GGWCC | 1 cut(s) | 286 |
| BbvI | GCAGC | 1 cut(s) | 30 |
| BccI | CCATC | 1 cut(s) | 207 |
| BisI | GCNGC | 1 cut(s) | 44 |
| BlsI | GCNGC | 1 cut(s) | 45 |
| Bme18I | GGWCC | 1 cut(s) | 286 |
| BmeT110I | CYCGRG | 1 cut(s) | 47 |
| BmgT120I | GGNCC | 3 cut(s) | 223, 286, 329 |
| BmsI | GCATC | 2 cut(s) | 79, 271 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 149, 181 |
| Bpu14I | TTCGAA | 1 cut(s) | 175 |
| BsaHI | GRCGYC | 1 cut(s) | 96 |
| BsaWI | WCCGGW | 1 cut(s) | 183 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 324, 354 |
| Bse118I | RCCGGY | 2 cut(s) | 92, 183 |
| BseGI | GGATG | 2 cut(s) | 94, 160 |
| BseRI | GAGGAG | 2 cut(s) | 77, 275 |
| BseXI | GCAGC | 1 cut(s) | 30 |
| BshFI | GGCC | 3 cut(s) | 108, 224, 331 |
| BshTI | ACCGGT | 1 cut(s) | 183 |
| BsiHKCI | CYCGRG | 1 cut(s) | 47 |
| BsiSI | CCGG | 3 cut(s) | 93, 109, 184 |
| BsnI | GGCC | 3 cut(s) | 108, 224, 331 |
| BsoBI | CYCGRG | 1 cut(s) | 47 |
| Bsp119I | TTCGAA | 1 cut(s) | 175 |
| Bsp143I | GATC | 1 cut(s) | 141 |
| BspACI | CCGC | 3 cut(s) | 68, 217, 284 |
| BspANI | GGCC | 3 cut(s) | 108, 224, 331 |
| BspT104I | TTCGAA | 1 cut(s) | 175 |
| BsrFI | RCCGGY | 2 cut(s) | 92, 183 |
| BssAI | RCCGGY | 2 cut(s) | 92, 183 |
| BssMI | GATC | 1 cut(s) | 141 |
| BssNI | GRCGYC | 1 cut(s) | 96 |
| Bst4CI | ACNGT | 2 cut(s) | 23, 354 |
| BstACI | GRCGYC | 1 cut(s) | 96 |
| BstBI | TTCGAA | 1 cut(s) | 175 |
| BstC8I | GCNNGC | 3 cut(s) | 94, 106, 294 |
| BstDEI | CTNAG | 1 cut(s) | 369 |
| BstF5I | GGATG | 2 cut(s) | 94, 160 |
| BstKTI | GATC | 1 cut(s) | 144 |
| BstMBI | GATC | 1 cut(s) | 141 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 49, 114 |
| BstV1I | GCAGC | 1 cut(s) | 30 |
| BsuRI | GGCC | 3 cut(s) | 108, 224, 331 |
| BtsCI | GGATG | 2 cut(s) | 94, 160 |
| Cac8I | GCNNGC | 3 cut(s) | 94, 106, 294 |
| Cfr10I | RCCGGY | 2 cut(s) | 92, 183 |
| Cfr13I | GGNCC | 3 cut(s) | 223, 286, 329 |
| CseI | GACGC | 1 cut(s) | 85 |
| CspAI | ACCGGT | 1 cut(s) | 183 |
| DdeI | CTNAG | 1 cut(s) | 369 |
| DpnI | GATC | 1 cut(s) | 143 |
| DpnII | GATC | 1 cut(s) | 141 |
| EaeI | YGGCCR | 1 cut(s) | 106 |
| EciI | GGCGGA | 2 cut(s) | 83, 232 |
| Eco47I | GGWCC | 1 cut(s) | 286 |
| Eco88I | CYCGRG | 1 cut(s) | 47 |
| EcoO109I | RGGNCCY | 1 cut(s) | 223 |
| FaiI | YATR | 1 cut(s) | 134 |
| Fnu4HI | GCNGC | 1 cut(s) | 44 |
| FokI | GGATG | 2 cut(s) | 101, 167 |
| Fsp4HI | GCNGC | 1 cut(s) | 44 |
| GluI | GCNGC | 1 cut(s) | 44 |
| HaeIII | GGCC | 3 cut(s) | 108, 224, 331 |
| HapII | CCGG | 3 cut(s) | 93, 109, 184 |
| HgaI | GACGC | 1 cut(s) | 85 |
| Hin1I | GRCGYC | 1 cut(s) | 96 |
| HindIII | AAGCTT | 1 cut(s) | 115 |
| HpaII | CCGG | 3 cut(s) | 93, 109, 184 |
| HphI | GGTGA | 1 cut(s) | 313 |
| Hpy188I | TCNGA | 3 cut(s) | 31, 169, 236 |
| Hpy188III | TCNNGA | 1 cut(s) | 6 |
| Hpy99I | CGWCG | 2 cut(s) | 101, 149 |
| HpyAV | CCTTC | 7 cut(s) | 3, 79, 143, 199, 214, 241, 250 |
| HpyCH4III | ACNGT | 2 cut(s) | 23, 354 |
| HpyCH4IV | ACGT | 1 cut(s) | 361 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 49, 114 |
| HpyF3I | CTNAG | 1 cut(s) | 369 |
| HpySE526I | ACGT | 1 cut(s) | 361 |
| Hsp92I | GRCGYC | 1 cut(s) | 96 |
| KroI | GCCGGC | 1 cut(s) | 92 |
| KroNI | GCCGGC | 1 cut(s) | 94 |
| Kzo9I | GATC | 1 cut(s) | 141 |
| LmnI | GCTCC | 1 cut(s) | 70 |
| LpnPI | CCDG | 8 cut(s) | 90, 106, 122, 181, 197, 278, 302, 312 |
| Lsp1109I | GCAGC | 1 cut(s) | 30 |
| LweI | GCATC | 2 cut(s) | 79, 271 |
| MaeII | ACGT | 1 cut(s) | 361 |
| MaeIII | GTNAC | 1 cut(s) | 319 |
| MalI | GATC | 1 cut(s) | 143 |
| MboI | GATC | 1 cut(s) | 141 |
| MboII | GAAGA | 1 cut(s) | 256 |
| MmeI | TCCRAC | 1 cut(s) | 336 |
| MnlI | CCTC | 6 cut(s) | 55, 58, 69, 253, 256, 350 |
| MroNI | GCCGGC | 1 cut(s) | 92 |
| MseI | TTAA | 1 cut(s) | 119 |
| MspI | CCGG | 3 cut(s) | 93, 109, 184 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 49, 114 |
| NaeI | GCCGGC | 1 cut(s) | 94 |
| NdeII | GATC | 1 cut(s) | 141 |
| NgoMIV | GCCGGC | 1 cut(s) | 92 |
| NmeAIII | GCCGAG | 1 cut(s) | 78 |
| NmuCI | GTSAC | 1 cut(s) | 319 |
| NspV | TTCGAA | 1 cut(s) | 175 |
| PaeR7I | CTCGAG | 1 cut(s) | 47 |
| PdiI | GCCGGC | 1 cut(s) | 94 |
| PinAI | ACCGGT | 1 cut(s) | 183 |
| PkrI | GCNGC | 1 cut(s) | 45 |
| PspPI | GGNCC | 3 cut(s) | 223, 286, 329 |
| PspXI | VCTCGAGB | 1 cut(s) | 47 |
| SaqAI | TTAA | 1 cut(s) | 119 |
| SatI | GCNGC | 1 cut(s) | 44 |
| Sau3AI | GATC | 1 cut(s) | 141 |
| Sau96I | GGNCC | 3 cut(s) | 223, 286, 329 |
| SetI | ASST | 7 cut(s) | 38, 45, 59, 106, 119, 278, 364 |
| SfaNI | GCATC | 2 cut(s) | 79, 271 |
| Sfr274I | CTCGAG | 1 cut(s) | 47 |
| SfuI | TTCGAA | 1 cut(s) | 175 |
| SinI | GGWCC | 1 cut(s) | 286 |
| SlaI | CTCGAG | 1 cut(s) | 47 |
| SmlI | CTYRAG | 1 cut(s) | 47 |
| SmoI | CTYRAG | 1 cut(s) | 47 |
| SsiI | CCGC | 3 cut(s) | 68, 217, 284 |
| TaaI | ACNGT | 2 cut(s) | 23, 354 |
| TaiI | ACGT | 1 cut(s) | 364 |
| TaqI | TCGA | 6 cut(s) | 48, 99, 144, 175, 272, 279 |
| Tru1I | TTAA | 1 cut(s) | 119 |
| Tru9I | TTAA | 1 cut(s) | 119 |
| TseFI | GTSAC | 1 cut(s) | 319 |
| TseI | GCWGC | 1 cut(s) | 43 |
| Tsp45I | GTSAC | 1 cut(s) | 319 |
| TspDTI | ATGAA | 2 cut(s) | 15, 137 |
| VpaK11BI | GGWCC | 1 cut(s) | 286 |
| XhoI | CTCGAG | 1 cut(s) | 47 |